FFCP PHASE1:Hg19::chr21:47551929..47551951,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:47551929..47551951,+
|short_description=p24@COL6A2
|description=CAGE_peak_24_at_COL6A2_5end
|association_with_transcript=146bp_to_CR536573_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FHW5 | |UniProt=Q6FHW5 | ||
|association_with_transcript=146bp_to_CR536573_5end | |||
|cluster_id=chr21:47551929..47551951,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_24_at_COL6A2_5end | |||
|id=chr21:47551929..47551951,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.74e-34!180;CL:0000057!6.44e-21!75;CL:0000048!2.37e-12!430;CL:0000034!1.25e-11!444;CL:0000723!1.68e-11!436;CL:0000680!9.10e-11!57;CL:0000056!9.10e-11!57;CL:0000355!9.10e-11!57;CL:0000187!7.57e-10!54;CL:0000183!1.06e-09!59;CL:0000393!1.88e-09!60;CL:0000211!1.88e-09!60;CL:0002620!3.13e-09!23;CL:0000499!6.93e-09!27;CL:0000192!2.97e-08!42;CL:0000514!2.97e-08!42;CL:0002334!1.23e-07!12;CL:0002570!1.43e-07!8;CL:0002320!2.18e-07!365;CL:0000327!3.85e-07!14;CL:0002371!5.36e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.14e-12;8!CL:0000723;3.11e-11;61!CL:0000134;5.53e-11;55!CL:0000048;4.30e-10;58!CL:0000499;3.86e-09;28!CL:0002559;1.36e-08;5!CL:0000034;3.00e-08;69!CL:0002320;1.50e-07;188!CL:0000135;7.86e-07;3!CL:0000388;7.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.26e-15,76;CL:0000048,4.00e-14,427;CL:0000723,1.45e-13,433;CL:0000034,7.56e-13,441;CL:0002570,1.40e-12,8;CL:0002320,3.57e-12,361;CL:0000499,3.91e-09,28;CL:0000134,5.52e-09,354;CL:0002559,1.07e-08,5;CL:0000187,4.26e-07,55;CL:0000135,7.92e-07,3;CL:0000388,7.92e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.00e-15!83;UBERON:0002329!4.00e-15!83;UBERON:0003077!4.00e-15!83;UBERON:0003059!4.00e-15!83;UBERON:0007282!4.00e-15!83;UBERON:0009618!4.00e-15!83;UBERON:0007285!4.00e-15!83;UBERON:0004290!2.24e-14!70;UBERON:0000486!1.01e-12!82;UBERON:0001013!7.62e-11!14;UBERON:0002385!1.40e-10!63;UBERON:0001015!1.40e-10!63;UBERON:0000383!1.40e-10!63;UBERON:0001134!1.43e-10!61;UBERON:0002036!1.43e-10!61;UBERON:0003082!1.43e-10!61;UBERON:0005256!1.29e-09!143;UBERON:0003102!6.75e-09!95;UBERON:0002199!5.46e-08!45;UBERON:0002416!5.46e-08!45;UBERON:0002384!2.30e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;9.59e-15;14!UBERON:0004905;1.32e-09;8!UBERON:0000982;1.32e-09;8!UBERON:0004770;1.32e-09;8!UBERON:0002384;1.15e-08;198!UBERON:0002073;1.36e-08;5!UBERON:0002067;2.22e-08;9!UBERON:0011135;6.92e-08;5!UBERON:0002216;6.92e-08;5!UBERON:0011134;6.92e-08;5!UBERON:0002209;6.92e-08;5!UBERON:0002213;6.92e-08;5!UBERON:0007844;6.92e-08;5!UBERON:0011138;6.92e-08;5!UBERON:0001130;6.92e-08;5!UBERON:0001066;6.92e-08;5!UBERON:0001468;6.92e-08;5!UBERON:0007846;7.86e-07;3!UBERON:0000043;7.86e-07;3!UBERON:0007845;7.86e-07;3!UBERON:0002199;8.44e-07;46!UBERON:0002416;8.44e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.43e-15,14;UBERON:0002384,8.51e-12,371;UBERON:0007524,2.93e-11,73;UBERON:0002329,9.84e-11,71;UBERON:0003059,9.84e-11,71;UBERON:0007282,9.84e-11,71;UBERON:0004290,9.84e-11,71;UBERON:0009618,9.84e-11,71;UBERON:0003077,1.78e-10,72;UBERON:0007285,1.78e-10,72;UBERON:0004905,4.92e-10,8;UBERON:0000982,4.92e-10,8;UBERON:0004770,4.92e-10,8;UBERON:0000486,6.26e-10,83;UBERON:0003104,2.20e-09,160;UBERON:0009142,2.20e-09,160;UBERON:0002199,3.97e-09,46;UBERON:0002416,3.97e-09,46;UBERON:0007503,4.42e-09,78;UBERON:0002073,1.07e-08,5;UBERON:0005086,1.07e-08,5;UBERON:0011135,2.21e-08,5;UBERON:0002216,2.21e-08,5;UBERON:0011134,2.21e-08,5;UBERON:0002209,2.21e-08,5;UBERON:0002213,2.21e-08,5;UBERON:0005856,2.21e-08,5;UBERON:0005866,2.21e-08,5;UBERON:0005863,2.21e-08,5;UBERON:0007844,2.21e-08,5;UBERON:0011138,2.21e-08,5;UBERON:0001130,2.21e-08,5;UBERON:0001066,2.21e-08,5;UBERON:0001468,2.21e-08,5;UBERON:0002067,2.27e-08,9;UBERON:0004016,2.27e-08,9;UBERON:0010083,2.27e-08,9;UBERON:0005256,3.44e-08,122;UBERON:0003102,3.74e-08,99;UBERON:0007846,7.92e-07,3;UBERON:0000043,7.92e-07,3;UBERON:0007845,7.92e-07,3 | |||
|phase1_expression=0.908391896352783,2.35510576280081,0.422863212287913,0,1.78784437770915,1.74467704820074,2.53299878168311,0.631719873426831,4.70134130759709,0,0,0,0,1.8564952944007,2.98257638155124,3.36162573225888,2.41077811209591,6.57279081348636,3.90346239032406,0.123121058076788,0.408001382488506,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,4.49024208778554,0.795285947051099,2.91980922181582,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0.662045904066094,3.72887606973458,1.06400514659507,0,0,3.20667812942308,0,0.404132016209064,0.653847612453835,0.605429710579726,1.72852777344,0,3.74592092196385,0,4.63290909710583,0.469737994575059,1.45685649931318,1.40450806702248,0.204154171254893,2.57952066354713,0.826606249406124,2.37600571456411,4.69807165629258,0,3.59309070908119,0.336672227908132,0.375355559615893,0,0,2.45190236639216,1.35214253015937,0.113432183160021,2.15267562826634,1.92201649936711,1.27159140695737,2.10063767259082,0.309157587715317,1.28820270022815,0.37223371266318,1.68776332241266,0.68205903612839,0.757301322732344,0.736399189138395,2.26304479546337,0.710019185033229,0.302256294682921,0.67824236924195,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0.252320850875628,0,3.12899064659632,20.5837100221723,1.38134921352481,1.85747171212792,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616964956219941,0,0,0.336393253036082,0.43596006883328,0.51336800074665,0.387815147273333,32.1890801266694,5.071816515336,1.32969058292435,1.04007436911366,0.771622122786426,0,1.3321108950805,1.42977993658148,1.08524321078289,0,2.28015329005615,1.42156779497018,0.791951872933429,0,0,0.099972991182057,0,0,0,1.4377491329495,0,0,0.723906533337896,0.821905290201534,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,1.59498939234882,6.5022167737758,1.89885516589815,3.32753378449291,1.96271887676878,0.788512075169673,0.468565659970853,0.902838299183157,4.5481500811197,4.1389228517002,0.664225598535437,0.553107505625109,2.5196248195744,1.56640925970192,2.74514739048685,0,0,0,0,0,0.604780586659361,0.248107807818777,0.153461973288062,1.12264037773229,0.384417447767103,1.02341449813341,0.804269605718038,1.48418066444991,6.32259744590888,6.74734556189883,0.328508624055237,7.2695620085707,6.04293967991788,0,0,0,0.803701137152247,5.28064387219479,4.327105693661,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,3.86682873168488,1.07834031980251,0.307007349452259,0.413509717453592,1.18162269355101,2.0302337147992,0.596586391912706,1.33548053470106,0,0,0,0.10115778085555,0,2.51849877464512,0,0.924100740528266,0,0,1.11194531462352,0.143124886741991,0.744316738719335,0,1.71567174531442,0,0.42793898803392,0,2.35484592059769,1.2591072030832,0.54907405947211,0.942499218765491,0,0,0.842516912477962,0,1.94970791705028,1.05650146756755,1.50149902548784,3.81794666275024,0,0,6.6343897524122,0.438450885253763,0.578775534266688,1.9676842561399,0.202910376962704,1.54911749049875,0.563391205064483,0.143411352204052,0.687743287091848,0.7133421029625,0,5.48879851773927,6.25660296623814,0,1.39973888097993,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,1.60515529459758,0,0,0,0,1.97292201424695,1.20990716048664,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0.698906672968121,0.171986032471617,0,0,0,0.290967049465258,0.0882561266915003,0.225980740780532,0,0,0,0,0,1.49417096317547,0.39961921916426,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,1.67569440763353,0,0.717873024576814,0.399358000997982,0.858452096273142,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,2.17199840701485,0,1.30634944043764,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,1.17632909849086,0,0,1.79105763464249,2.80455971816669,1.10961172300523,2.46223906857616,3.0188148210309,1.77962244319307,1.14420034198462,1.96600200892211,1.24349760466224,0.887130899937803,0.159296767163702,2.24901556081802,0.931577741257556,0.4147062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| ||
|short_description=p24@COL6A2 | |||
}} | }} |
Latest revision as of 23:10, 18 September 2015
Short description: | p24@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 146bp_to_CR536573_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | Q6FHW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.26e-15 | 76 |
multi fate stem cell | 4.00e-14 | 427 |
somatic stem cell | 1.45e-13 | 433 |
stem cell | 7.56e-13 | 441 |
mesenchymal stem cell of adipose | 1.40e-12 | 8 |
connective tissue cell | 3.57e-12 | 361 |
stromal cell | 3.91e-09 | 28 |
mesenchymal cell | 5.52e-09 | 354 |
hair follicle cell | 1.07e-08 | 5 |
muscle cell | 4.26e-07 | 55 |
fibrocyte | 7.92e-07 | 3 |
tendon cell | 7.92e-07 | 3 |