FFCP PHASE1:Hg19::chr15:29967323..29967344,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=129bp_to_ENST00000536835,uc001zcp.1_5end | |association_with_transcript=129bp_to_ENST00000536835,uc001zcp.1_5end | ||
|cluster_id=chr15:29967323..29967344,+ | |||
|description=CAGE_peak_6_at_ENST00000536835_5end,CAGE_peak_6_at_uc001zcp.1_5end | |description=CAGE_peak_6_at_ENST00000536835_5end,CAGE_peak_6_at_uc001zcp.1_5end | ||
|id=chr15:29967323..29967344,+ | |id=chr15:29967323..29967344,+ | ||
|ontology_enrichment_celltype=CL:0000183!8.96e-07!59 | |ontology_enrichment_celltype=CL:0000183!8.96e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000669;7.82e-16;4!CL:0002575;1.57e-14;2!CL:0002379;1.95e-08;1!CL:1000449;1.13e-07;15!CL:1000507;8.80e-07;10!CL:1000494;8.80e-07;10!CL:1000497;8.81e-07;17!CL:0002518;8.81e-07;17 | |ontology_enrichment_celltype_v019=CL:0000669;7.82e-16;4!CL:0002575;1.57e-14;2!CL:0002379;1.95e-08;1!CL:1000449;1.13e-07;15!CL:1000507;8.80e-07;10!CL:1000494;8.80e-07;10!CL:1000497;8.81e-07;17!CL:0002518;8.81e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.60e-15,4;CL:0002575,2.38e-14,2;CL:0002379,2.17e-08,1;CL:1000449,1.17e-07,15;CL:1000497,9.10e-07,17;CL:0002518,9.10e-07,17;CL:1000507,9.44e-07,10;CL:1000494,9.44e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.10e-08;1 | |ontology_enrichment_development_v019=UBERON:0006242;4.10e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.95e-08;1!DOID:3565;1.95e-08;1 | |ontology_enrichment_disease_v019=DOID:3620;1.95e-08;1!DOID:3565;1.95e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,2.17e-08,1;DOID:3565,2.17e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.03e-12!347;UBERON:0005256!5.78e-10!143;UBERON:0000119!1.53e-07!312;UBERON:0000483!6.06e-07!309;UBERON:0000025!9.14e-07!194 | |ontology_enrichment_uberon=UBERON:0000481!1.03e-12!347;UBERON:0005256!5.78e-10!143;UBERON:0000119!1.53e-07!312;UBERON:0000483!6.06e-07!309;UBERON:0000025!9.14e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.26e-14;17!UBERON:0002108;1.39e-13;4!UBERON:0005409;1.19e-10;22!UBERON:0006555;1.13e-07;15!UBERON:0004819;1.13e-07;15!UBERON:0001285;1.13e-07;15!UBERON:0007684;1.13e-07;15!UBERON:0001155;1.37e-07;9!UBERON:0004211;8.80e-07;10!UBERON:0009773;8.80e-07;10!UBERON:0001231;8.80e-07;10!UBERON:0004810;8.80e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0000160;9.26e-14;17!UBERON:0002108;1.39e-13;4!UBERON:0005409;1.19e-10;22!UBERON:0006555;1.13e-07;15!UBERON:0004819;1.13e-07;15!UBERON:0001285;1.13e-07;15!UBERON:0007684;1.13e-07;15!UBERON:0001155;1.37e-07;9!UBERON:0004211;8.80e-07;10!UBERON:0009773;8.80e-07;10!UBERON:0001231;8.80e-07;10!UBERON:0004810;8.80e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.19e-14,17;UBERON:0002108,1.49e-13,4;UBERON:0005409,2.14e-09,25;UBERON:0004211,1.17e-07,15;UBERON:0009773,1.17e-07,15;UBERON:0001231,1.17e-07,15;UBERON:0001285,1.17e-07,15;UBERON:0007684,1.17e-07,15;UBERON:0004208,1.17e-07,15;UBERON:0001155,1.17e-07,9;UBERON:0006555,3.47e-07,16;UBERON:0004819,3.47e-07,16;UBERON:0005172,4.38e-07,54;UBERON:0005173,4.38e-07,54;UBERON:0004810,9.44e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,4.88460817580699,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,1.56727360739044,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.36669142910475,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.50051156317903,0.813795071099207,0,0,0,0.117141414992713,0,0,4.1389228517002,0,0,0.347534457872331,1.37060810223918,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.177561725313127,0.410635780069046,0,0.581051892299796,0,0,0,0,0.182091168006717,0.262248829918848,0,0,1.56869953835371,4.38417673959782,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.426133137080504,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0.632758849437452,0,0.255897791311334,0,0.636406495851874,0,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,1.239293992399,0.563391205064483,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.13654458722565,0,0,0,0,0.140669416410513,0,1.6480387422676,0,0,0.552567831062295,0.251932747854276,0,0,0,0.898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,2.98578579323551,4.33442066066362,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.561111741760736,1.06726497369676,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,1.87012214878023,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.394028536495991,0.83927341015997,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0.58620893471233,0,0,0,2.9084762440336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,2.58792401667989,0,0,0.149254802886874,0,0,0,0,3.55924488638614,0,0,0,0.147855149989634,0.318593534327405,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0.398095888698616,0,0,0.336749488765919,0,0.192619830407303,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.883445729729405,0,0,0.512483037175893,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.615349092722265,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0.739280431085226,0,0,0,0.253663240775627,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,5.78806185809585,2.62271472604749,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.271965960763659,0,3.1741610430924,0,0,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,4.88460817580699,0,0,0.74259811776028,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,1.56727360739044,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0.250237039743928,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.36669142910475,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.50051156317903,0.813795071099207,0,0,0,0.117141414992713,0,0,4.1389228517002,0,0,0.347534457872331,1.37060810223918,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.177561725313127,0.410635780069046,0,0.581051892299796,0,0,0,0,0.182091168006717,0.262248829918848,0,0,1.56869953835371,4.38417673959782,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.426133137080504,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0.632758849437452,0,0.255897791311334,0,0.636406495851874,0,0.359744915166629,0,0.117812402345686,0,0,0.421258456238981,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,1.239293992399,0.563391205064483,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.13654458722565,0,0,0,0,0.140669416410513,0,1.6480387422676,0,0,0.552567831062295,0.251932747854276,0,0,0,0.898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,2.98578579323551,4.33442066066362,1.83309043480088,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.561111741760736,1.06726497369676,0,0,0,0,0,0,0,0.135904206073614,0,0,0.288950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,1.87012214878023,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.394028536495991,0.83927341015997,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0.58620893471233,0,0,0,2.9084762440336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,2.58792401667989,0,0,0.149254802886874,0,0,0,0,3.55924488638614,0,0,0,0.147855149989634,0.318593534327405,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0,0.398095888698616,0,0,0.336749488765919,0,0.192619830407303,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0.219284049578707,0.883445729729405,0,0,0.512483037175893,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.615349092722265,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0.739280431085226,0,0,0,0.253663240775627,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,5.78806185809585,2.62271472604749,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0.271965960763659,0,3.1741610430924,0,0,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p6@ENST00000536835,p6@uc001zcp.1 | |short_description=p6@ENST00000536835,p6@uc001zcp.1 | ||
}} | }} |
Latest revision as of 00:38, 25 July 2015
Short description: | p6@ENST00000536835, p6@uc001zcp.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ENST00000536835_5end, CAGE_peak_6_at_uc001zcp.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_ENST00000536835, uc001zcp.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.60e-15 | 4 |
central nervous system pericyte | 2.38e-14 | 2 |
meningothelial cell | 2.17e-08 | 1 |
epithelial cell of nephron | 1.17e-07 | 15 |
kidney cell | 9.10e-07 | 17 |
kidney epithelial cell | 9.10e-07 | 17 |
kidney tubule cell | 9.44e-07 | 10 |
nephron tubule epithelial cell | 9.44e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.19e-14 | 17 |
small intestine | 1.49e-13 | 4 |
gastrointestinal system | 2.14e-09 | 25 |
nephron epithelium | 1.17e-07 | 15 |
renal tubule | 1.17e-07 | 15 |
nephron tubule | 1.17e-07 | 15 |
nephron | 1.17e-07 | 15 |
uriniferous tubule | 1.17e-07 | 15 |
nephrogenic mesenchyme | 1.17e-07 | 15 |
colon | 1.17e-07 | 9 |
excretory tube | 3.47e-07 | 16 |
kidney epithelium | 3.47e-07 | 16 |
abdomen element | 4.38e-07 | 54 |
abdominal segment element | 4.38e-07 | 54 |
nephron tubule epithelium | 9.44e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.17e-08 | 1 |
meningioma | 2.17e-08 | 1 |