FFCP PHASE1:Hg19::chr3:46449673..46449704,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9034 | |EntrezGene=9034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1612 | |HGNC=1612 | ||
|TSSclassifier=strong | |||
|UniProt=O00421 | |UniProt=O00421 | ||
|association_with_transcript=102bp_to_AJ344142,AY337001,DQ892102,DQ895296_5end | |association_with_transcript=102bp_to_AJ344142,AY337001,DQ892102,DQ895296_5end | ||
|cluster_id=chr3:46449673..46449704,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_9_at_CCRL2_5end | |description=CAGE_peak_9_at_CCRL2_5end | ||
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|ontology_enrichment_celltype=CL:0002057!5.17e-102!42;CL:0000860!1.18e-94!45;CL:0002009!1.02e-86!65;CL:0002194!3.19e-85!63;CL:0000576!3.19e-85!63;CL:0000040!3.19e-85!63;CL:0000559!3.19e-85!63;CL:0000557!1.01e-78!71;CL:0000766!5.25e-77!76;CL:0000839!6.38e-76!70;CL:0000763!7.83e-55!112;CL:0000049!7.83e-55!112;CL:0002087!5.80e-46!119;CL:0000738!2.89e-44!140;CL:0002031!1.08e-43!124;CL:0000037!5.14e-38!172;CL:0000566!5.14e-38!172;CL:0002032!4.34e-36!165;CL:0000837!4.34e-36!165;CL:0000988!2.15e-35!182;CL:0000134!5.10e-14!358;CL:0002320!1.48e-13!365;CL:0000219!6.38e-12!390;CL:0000034!1.22e-11!444;CL:0000048!9.98e-11!430;CL:0000723!1.94e-10!436;CL:0002393!3.42e-10!9;CL:0002397!3.42e-10!9 | |ontology_enrichment_celltype=CL:0002057!5.17e-102!42;CL:0000860!1.18e-94!45;CL:0002009!1.02e-86!65;CL:0002194!3.19e-85!63;CL:0000576!3.19e-85!63;CL:0000040!3.19e-85!63;CL:0000559!3.19e-85!63;CL:0000557!1.01e-78!71;CL:0000766!5.25e-77!76;CL:0000839!6.38e-76!70;CL:0000763!7.83e-55!112;CL:0000049!7.83e-55!112;CL:0002087!5.80e-46!119;CL:0000738!2.89e-44!140;CL:0002031!1.08e-43!124;CL:0000037!5.14e-38!172;CL:0000566!5.14e-38!172;CL:0002032!4.34e-36!165;CL:0000837!4.34e-36!165;CL:0000988!2.15e-35!182;CL:0000134!5.10e-14!358;CL:0002320!1.48e-13!365;CL:0000219!6.38e-12!390;CL:0000034!1.22e-11!444;CL:0000048!9.98e-11!430;CL:0000723!1.94e-10!436;CL:0002393!3.42e-10!9;CL:0002397!3.42e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-117;33!CL:0002057;1.03e-117;33!CL:0000473;1.90e-83;39!CL:0000234;1.90e-83;39!CL:0000576;4.74e-67;48!CL:0000766;7.33e-40;69!CL:0000763;2.51e-18;100!CL:0002087;1.45e-17;104!CL:0000738;2.21e-11;136!CL:0002393;6.35e-10;6!CL:0002397;6.35e-10;6 | |ontology_enrichment_celltype_v019=CL:0000860;1.03e-117;33!CL:0002057;1.03e-117;33!CL:0000473;1.90e-83;39!CL:0000234;1.90e-83;39!CL:0000576;4.74e-67;48!CL:0000766;7.33e-40;69!CL:0000763;2.51e-18;100!CL:0002087;1.45e-17;104!CL:0000738;2.21e-11;136!CL:0002393;6.35e-10;6!CL:0002397;6.35e-10;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.13e-125,42;CL:0002057,5.13e-125,42;CL:0000473,1.51e-116,48;CL:0000234,1.51e-116,48;CL:0002194,2.71e-92,59;CL:0000576,2.71e-92,59;CL:0000040,2.71e-92,59;CL:0000559,2.71e-92,59;CL:0002009,3.66e-89,61;CL:0000839,3.75e-82,66;CL:0000557,7.12e-81,67;CL:0000766,5.25e-75,72;CL:0000763,1.25e-48,108;CL:0000049,1.25e-48,108;CL:0002087,2.13e-45,115;CL:0002031,2.56e-43,120;CL:0000738,1.11e-37,136;CL:0002032,4.30e-31,161;CL:0000837,4.30e-31,161;CL:0000037,1.35e-29,168;CL:0000988,7.62e-28,177;CL:0000134,2.30e-11,354;CL:0002320,4.85e-11,361;CL:0000219,6.70e-10,386;CL:0000034,6.18e-09,441;CL:0000048,1.68e-08,427;CL:0000723,2.62e-08,433;CL:0002393,8.73e-07,9;CL:0002397,8.73e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.89e-92;42!CL:0000049;1.08e-12;108 | |ontology_enrichment_development_v019=CL:0002057;3.89e-92;42!CL:0000049;1.08e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.31e-72!80;UBERON:0001474!5.89e-67!86;UBERON:0002390!5.19e-61!102;UBERON:0003061!5.19e-61!102;UBERON:0004765!9.95e-56!101;UBERON:0001434!9.95e-56!101;UBERON:0002193!9.22e-55!112;UBERON:0002405!2.12e-50!115;UBERON:0002204!6.77e-32!167;UBERON:0003081!9.10e-27!216;UBERON:0002384!6.36e-13!375;UBERON:0000926!8.36e-08!448;UBERON:0004120!8.36e-08!448;UBERON:0006603!8.36e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!1.31e-72!80;UBERON:0001474!5.89e-67!86;UBERON:0002390!5.19e-61!102;UBERON:0003061!5.19e-61!102;UBERON:0004765!9.95e-56!101;UBERON:0001434!9.95e-56!101;UBERON:0002193!9.22e-55!112;UBERON:0002405!2.12e-50!115;UBERON:0002204!6.77e-32!167;UBERON:0003081!9.10e-27!216;UBERON:0002384!6.36e-13!375;UBERON:0000926!8.36e-08!448;UBERON:0004120!8.36e-08!448;UBERON:0006603!8.36e-08!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.35e-71,76;UBERON:0001474,2.18e-65,82;UBERON:0004765,3.25e-59,90;UBERON:0002405,3.61e-57,93;UBERON:0002390,4.91e-54,98;UBERON:0003061,4.91e-54,98;UBERON:0001434,7.21e-53,100;UBERON:0002193,1.25e-48,108;UBERON:0002204,8.40e-30,167;UBERON:0003081,1.20e-23,203;UBERON:0000926,2.01e-13,315;UBERON:0004120,2.01e-13,315;UBERON:0006603,2.01e-13,315;UBERON:0002384,1.34e-10,371 | |||
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| ||
|short_description=p9@CCRL2 | |short_description=p9@CCRL2 | ||
}} | }} |
Latest revision as of 11:08, 18 September 2015
Short description: | p9@CCRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCRL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 102bp_to_AJ344142, AY337001, DQ892102, DQ895296_5end |
EntrezGene: | CCRL2 |
HGNC: | 1612 |
UniProt: | O00421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.13e-125 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.13e-125 | 42 |
defensive cell | 1.51e-116 | 48 |
phagocyte | 1.51e-116 | 48 |
monopoietic cell | 2.71e-92 | 59 |
monocyte | 2.71e-92 | 59 |
monoblast | 2.71e-92 | 59 |
promonocyte | 2.71e-92 | 59 |
macrophage dendritic cell progenitor | 3.66e-89 | 61 |
myeloid lineage restricted progenitor cell | 3.75e-82 | 66 |
granulocyte monocyte progenitor cell | 7.12e-81 | 67 |
myeloid leukocyte | 5.25e-75 | 72 |
myeloid cell | 1.25e-48 | 108 |
common myeloid progenitor | 1.25e-48 | 108 |
nongranular leukocyte | 2.13e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 2.56e-43 | 120 |
leukocyte | 1.11e-37 | 136 |
hematopoietic oligopotent progenitor cell | 4.30e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.30e-31 | 161 |
hematopoietic stem cell | 1.35e-29 | 168 |
hematopoietic cell | 7.62e-28 | 177 |
mesenchymal cell | 2.30e-11 | 354 |
connective tissue cell | 4.85e-11 | 361 |
motile cell | 6.70e-10 | 386 |
stem cell | 6.18e-09 | 441 |
multi fate stem cell | 1.68e-08 | 427 |
somatic stem cell | 2.62e-08 | 433 |
intermediate monocyte | 8.73e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.35e-71 | 76 |
bone element | 2.18e-65 | 82 |
skeletal element | 3.25e-59 | 90 |
immune system | 3.61e-57 | 93 |
hematopoietic system | 4.91e-54 | 98 |
blood island | 4.91e-54 | 98 |
skeletal system | 7.21e-53 | 100 |
hemolymphoid system | 1.25e-48 | 108 |
musculoskeletal system | 8.40e-30 | 167 |
lateral plate mesoderm | 1.20e-23 | 203 |
mesoderm | 2.01e-13 | 315 |
mesoderm-derived structure | 2.01e-13 | 315 |
presumptive mesoderm | 2.01e-13 | 315 |
connective tissue | 1.34e-10 | 371 |