FFCP PHASE1:Hg19::chr15:50646241..50646256,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100129387 | |EntrezGene=100129387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-114bp_to_NR_024490,uc001zyh.3_5end | |association_with_transcript=-114bp_to_NR_024490,uc001zyh.3_5end | ||
|cluster_id=chr15:50646241..50646256,+ | |||
|description=CAGE_peak_4_at_LOC100129387_5end | |description=CAGE_peak_4_at_LOC100129387_5end | ||
|id=chr15:50646241..50646256,+ | |id=chr15:50646241..50646256,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.67e-18!140;CL:0000988!3.41e-17!182;CL:0000037!6.46e-17!172;CL:0000566!6.46e-17!172;CL:0002032!2.14e-14!165;CL:0000837!2.14e-14!165;CL:0000034!8.84e-14!444;CL:0000048!1.01e-13!430;CL:0002031!1.81e-13!124;CL:0000144!3.15e-13!625;CL:0000723!5.06e-13!436;CL:0002320!1.60e-12!365;CL:0000134!3.15e-12!358;CL:0002087!4.16e-12!119;CL:0000860!4.95e-12!45;CL:0002057!5.84e-12!42;CL:0002371!1.83e-11!591;CL:0000219!2.87e-11!390;CL:0000003!3.08e-11!722;CL:0000766!4.38e-11!76;CL:0000012!1.71e-10!682;CL:0000557!6.50e-10!71;CL:0000115!6.69e-10!35;CL:0002139!9.33e-10!24;CL:0000213!1.21e-09!57;CL:0000215!1.21e-09!57;CL:0002078!1.49e-09!44;CL:0000763!1.63e-09!112;CL:0000049!1.63e-09!112;CL:0000548!1.77e-09!679;CL:0000004!1.77e-09!679;CL:0000255!1.77e-09!679;CL:0000236!7.36e-09!14;CL:0000839!1.87e-08!70;CL:0000071!9.13e-08!18;CL:0002546!9.13e-08!18;CL:0002009!2.92e-07!65;CL:0000063!8.92e-07!578 | |ontology_enrichment_celltype=CL:0000738!2.67e-18!140;CL:0000988!3.41e-17!182;CL:0000037!6.46e-17!172;CL:0000566!6.46e-17!172;CL:0002032!2.14e-14!165;CL:0000837!2.14e-14!165;CL:0000034!8.84e-14!444;CL:0000048!1.01e-13!430;CL:0002031!1.81e-13!124;CL:0000144!3.15e-13!625;CL:0000723!5.06e-13!436;CL:0002320!1.60e-12!365;CL:0000134!3.15e-12!358;CL:0002087!4.16e-12!119;CL:0000860!4.95e-12!45;CL:0002057!5.84e-12!42;CL:0002371!1.83e-11!591;CL:0000219!2.87e-11!390;CL:0000003!3.08e-11!722;CL:0000766!4.38e-11!76;CL:0000012!1.71e-10!682;CL:0000557!6.50e-10!71;CL:0000115!6.69e-10!35;CL:0002139!9.33e-10!24;CL:0000213!1.21e-09!57;CL:0000215!1.21e-09!57;CL:0002078!1.49e-09!44;CL:0000763!1.63e-09!112;CL:0000049!1.63e-09!112;CL:0000548!1.77e-09!679;CL:0000004!1.77e-09!679;CL:0000255!1.77e-09!679;CL:0000236!7.36e-09!14;CL:0000839!1.87e-08!70;CL:0000071!9.13e-08!18;CL:0002546!9.13e-08!18;CL:0002009!2.92e-07!65;CL:0000063!8.92e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.99e-16;13!CL:0000097;4.19e-11;5!CL:0000115;1.47e-09;36!CL:0002139;2.13e-08;24!CL:0000163;6.02e-08;9!CL:0000945;1.74e-07;24!CL:0000623;2.49e-07;3!CL:0002078;2.57e-07;45 | |ontology_enrichment_celltype_v019=CL:0000236;3.99e-16;13!CL:0000097;4.19e-11;5!CL:0000115;1.47e-09;36!CL:0002139;2.13e-08;24!CL:0000163;6.02e-08;9!CL:0000945;1.74e-07;24!CL:0000623;2.49e-07;3!CL:0002078;2.57e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.61e-19,136;CL:0000988,1.18e-17,177;CL:0000037,1.88e-17,168;CL:0000236,1.35e-15,14;CL:0002031,1.33e-14,120;CL:0002032,3.30e-14,161;CL:0000837,3.30e-14,161;CL:0002087,2.09e-11,115;CL:0000097,3.97e-11,5;CL:0002028,3.97e-11,5;CL:0000115,4.78e-11,36;CL:0002078,2.50e-10,45;CL:0000134,1.06e-09,354;CL:0002320,1.10e-09,361;CL:0000766,6.12e-09,72;CL:0000034,9.21e-09,441;CL:0000838,1.16e-08,52;CL:0000048,1.30e-08,427;CL:0002139,1.64e-08,24;CL:0000542,2.10e-08,53;CL:0000051,2.10e-08,53;CL:0000723,3.14e-08,433;CL:0000163,5.07e-08,9;CL:0000557,6.05e-08,67;CL:0000945,6.44e-08,24;CL:0000826,6.44e-08,24;CL:0000213,7.56e-08,58;CL:0000215,7.56e-08,58;CL:0000219,8.09e-08,386;CL:0000623,2.45e-07,3;CL:0000825,2.45e-07,3;CL:0000763,5.75e-07,108;CL:0000049,5.75e-07,108;CL:0000071,6.11e-07,18;CL:0002546,6.11e-07,18 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.02e-11!375;UBERON:0002193!1.97e-10!112;UBERON:0002405!3.53e-09!115;UBERON:0002390!3.71e-08!102;UBERON:0003061!3.71e-08!102;UBERON:0002371!4.46e-08!80;UBERON:0001986!9.13e-08!18;UBERON:0004638!9.13e-08!18;UBERON:0004852!9.13e-08!18;UBERON:0003081!2.06e-07!216;UBERON:0006914!2.73e-07!25;UBERON:0001474!4.03e-07!86 | |ontology_enrichment_uberon=UBERON:0002384!3.02e-11!375;UBERON:0002193!1.97e-10!112;UBERON:0002405!3.53e-09!115;UBERON:0002390!3.71e-08!102;UBERON:0003061!3.71e-08!102;UBERON:0002371!4.46e-08!80;UBERON:0001986!9.13e-08!18;UBERON:0004638!9.13e-08!18;UBERON:0004852!9.13e-08!18;UBERON:0003081!2.06e-07!216;UBERON:0006914!2.73e-07!25;UBERON:0001474!4.03e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p4@LOC100129387 | |short_description=p4@LOC100129387 | ||
}} | }} |
Latest revision as of 23:33, 17 September 2015
Short description: | p4@LOC100129387 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC100129387_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_NR_024490, uc001zyh.3_5end |
EntrezGene: | LOC100129387 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.05e-09 | 371 |
lateral plate mesoderm | 6.24e-08 | 203 |
hemolymphoid system | 1.39e-07 | 108 |
immune system | 1.68e-07 | 93 |
bone marrow | 3.20e-07 | 76 |
blood vessel endothelium | 6.11e-07 | 18 |
endothelium | 6.11e-07 | 18 |
cardiovascular system endothelium | 6.11e-07 | 18 |
squamous epithelium | 6.87e-07 | 25 |