FFCP PHASE1:Hg19::chr3:145051912..145051917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:145051912..145051917,+ | |||
|coexpression_cluster_id=C312 | |coexpression_cluster_id=C312 | ||
|description=CAGE_peak_at_chr3:145051912..145051917,+ | |description=CAGE_peak_at_chr3:145051912..145051917,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!3.67e-15!7;CL:0000586!3.67e-15!7;CL:0002322!9.80e-14!5 | |ontology_enrichment_celltype=CL:0000039!3.67e-15!7;CL:0000586!3.67e-15!7;CL:0002322!9.80e-14!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.37e-07;7!CL:0000586;8.37e-07;7 | |ontology_enrichment_celltype_v019=CL:0000039;8.37e-07;7!CL:0000586;8.37e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.37e-07,7;CL:0000586,8.37e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.80e-14!235;DOID:14566!8.07e-14!239;DOID:0050687!1.59e-12!143;DOID:305!1.77e-12!106;DOID:1036!4.92e-09!8;DOID:299!2.40e-07!25 | |ontology_enrichment_disease=DOID:162!2.80e-14!235;DOID:14566!8.07e-14!239;DOID:0050687!1.59e-12!143;DOID:305!1.77e-12!106;DOID:1036!4.92e-09!8;DOID:299!2.40e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.02e-19;8!DOID:0060085;2.07e-11;1!DOID:3165;2.07e-11;1!DOID:0060121;2.07e-11;1!DOID:2438;2.07e-11;1!DOID:4418;2.07e-11;1!DOID:4960;4.22e-11;1!DOID:0070004;4.22e-11;1!DOID:2531;9.43e-09;51!DOID:0060083;9.43e-09;51!DOID:1240;3.43e-08;39!DOID:8692;4.36e-08;31 | |ontology_enrichment_disease_v019=DOID:1036;1.02e-19;8!DOID:0060085;2.07e-11;1!DOID:3165;2.07e-11;1!DOID:0060121;2.07e-11;1!DOID:2438;2.07e-11;1!DOID:4418;2.07e-11;1!DOID:4960;4.22e-11;1!DOID:0070004;4.22e-11;1!DOID:2531;9.43e-09;51!DOID:0060083;9.43e-09;51!DOID:1240;3.43e-08;39!DOID:8692;4.36e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,7.61e-20,8;DOID:0060085,1.97e-11,1;DOID:3165,1.97e-11,1;DOID:0060121,1.97e-11,1;DOID:2438,1.97e-11,1;DOID:4418,1.97e-11,1;DOID:2531,2.02e-11,51;DOID:0060083,2.02e-11,51;DOID:162,3.88e-11,235;DOID:4960,4.44e-11,1;DOID:0070004,4.44e-11,1;DOID:14566,7.51e-11,239;DOID:1240,1.07e-08,39;DOID:8692,7.34e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.95e-13!8;UBERON:0003135!2.11e-09!11;UBERON:0000991!9.90e-07!21;UBERON:0009196!9.90e-07!21;UBERON:0009117!9.90e-07!21;UBERON:0005564!9.90e-07!21 | |ontology_enrichment_uberon=UBERON:0000473!4.95e-13!8;UBERON:0003135!2.11e-09!11;UBERON:0000991!9.90e-07!21;UBERON:0009196!9.90e-07!21;UBERON:0009117!9.90e-07!21;UBERON:0005564!9.90e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.60e-11;1!UBERON:0009842;1.60e-11;1!UBERON:0003704;1.60e-11;1!UBERON:0001171;1.60e-11;1!UBERON:0001172;1.60e-11;1!UBERON:0002294;8.61e-07;7!UBERON:0001173;8.61e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001282;1.60e-11;1!UBERON:0009842;1.60e-11;1!UBERON:0003704;1.60e-11;1!UBERON:0001171;1.60e-11;1!UBERON:0001172;1.60e-11;1!UBERON:0002294;8.61e-07;7!UBERON:0001173;8.61e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.60e-11,1;UBERON:0009842,1.60e-11,1;UBERON:0003704,1.60e-11,1;UBERON:0001171,1.60e-11,1;UBERON:0001172,1.60e-11,1 | |||
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| ||
|short_description=p@chr3:145051912..145051917,+ | |short_description=p@chr3:145051912..145051917,+ | ||
}} | }} |
Latest revision as of 16:36, 29 July 2015
Short description: | p@chr3:145051912..145051917, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:145051912..145051917, + |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.37e-07 | 7 |
germ cell | 8.37e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.60e-11 | 1 |
acinus | 1.60e-11 | 1 |
intrahepatic bile duct | 1.60e-11 | 1 |
portal lobule | 1.60e-11 | 1 |
hepatic acinus | 1.60e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.61e-20 | 8 |
organ system benign neoplasm | 1.97e-11 | 1 |
skin benign neoplasm | 1.97e-11 | 1 |
integumentary system benign neoplasm | 1.97e-11 | 1 |
dermis tumor | 1.97e-11 | 1 |
cutaneous fibrous histiocytoma | 1.97e-11 | 1 |
hematologic cancer | 2.02e-11 | 51 |
immune system cancer | 2.02e-11 | 51 |
cancer | 3.88e-11 | 235 |
bone marrow cancer | 4.44e-11 | 1 |
myeloma | 4.44e-11 | 1 |
disease of cellular proliferation | 7.51e-11 | 239 |
leukemia | 1.07e-08 | 39 |
myeloid leukemia | 7.34e-08 | 31 |