FFCP PHASE1:Hg19::chr17:4852243..4852319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5216 | |EntrezGene=5216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8881 | |HGNC=8881 | ||
|TSSclassifier=strong | |||
|UniProt=P07737 | |UniProt=P07737 | ||
|association_with_transcript=0bp_to_ENST00000225655_5end | |association_with_transcript=0bp_to_ENST00000225655_5end | ||
|cluster_id=chr17:4852243..4852319,- | |||
|description=CAGE_peak_4_at_PFN1_5end | |description=CAGE_peak_4_at_PFN1_5end | ||
|id=chr17:4852243..4852319,- | |id=chr17:4852243..4852319,- | ||
|ontology_enrichment_celltype=CL:0002321!1.90e-15!248;CL:0000220!9.89e-15!246;CL:0000548!1.92e-11!679;CL:0000004!1.92e-11!679;CL:0000255!1.92e-11!679;CL:0000012!3.40e-11!682;CL:0000066!5.64e-11!254;CL:0000055!7.03e-11!180;CL:0000222!1.09e-09!119;CL:0000183!1.24e-08!59;CL:0000095!3.64e-08!17;CL:0000123!3.64e-08!17;CL:0002319!4.17e-08!25;CL:0000133!4.34e-08!59;CL:0000243!3.48e-07!15;CL:0000125!3.48e-07!15;CL:0000030!3.48e-07!15;CL:0000339!3.48e-07!15;CL:0000333!3.70e-07!41;CL:0000221!3.84e-07!71;CL:0000393!4.14e-07!60;CL:0000211!4.14e-07!60;CL:1000449!9.74e-07!16 | |ontology_enrichment_celltype=CL:0002321!1.90e-15!248;CL:0000220!9.89e-15!246;CL:0000548!1.92e-11!679;CL:0000004!1.92e-11!679;CL:0000255!1.92e-11!679;CL:0000012!3.40e-11!682;CL:0000066!5.64e-11!254;CL:0000055!7.03e-11!180;CL:0000222!1.09e-09!119;CL:0000183!1.24e-08!59;CL:0000095!3.64e-08!17;CL:0000123!3.64e-08!17;CL:0002319!4.17e-08!25;CL:0000133!4.34e-08!59;CL:0000243!3.48e-07!15;CL:0000125!3.48e-07!15;CL:0000030!3.48e-07!15;CL:0000339!3.48e-07!15;CL:0000333!3.70e-07!41;CL:0000221!3.84e-07!71;CL:0000393!4.14e-07!60;CL:0000211!4.14e-07!60;CL:1000449!9.74e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000095;3.10e-08;17!CL:0002319;4.60e-08;25!CL:0000243;2.97e-07;15!CL:0000125;2.97e-07;15!CL:1000449;4.79e-07;15 | |ontology_enrichment_celltype_v019=CL:0000095;3.10e-08;17!CL:0002319;4.60e-08;25!CL:0000243;2.97e-07;15!CL:0000125;2.97e-07;15!CL:1000449;4.79e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.04e-16,250;CL:0000066,5.64e-11,253;CL:0000222,5.38e-10,121;CL:0000095,3.60e-08,17;CL:0000123,3.60e-08,17;CL:0002319,4.13e-08,25;CL:0000133,4.29e-08,59;CL:0000243,3.45e-07,15;CL:0000125,3.45e-07,15;CL:0000030,3.45e-07,15;CL:0000339,3.45e-07,15;CL:0000333,3.67e-07,41;CL:0000393,4.56e-07,61;CL:0000211,4.56e-07,61;CL:0000221,4.98e-07,72;CL:1000449,6.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;2.97e-07;15 | |ontology_enrichment_development_v019=CL:0000339;2.97e-07;15 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.53e-14,235;DOID:14566,2.99e-14,239;DOID:0050686,1.50e-08,137;DOID:0050687,3.50e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000119!6.88e-09!312;UBERON:0000483!2.33e-08!309;UBERON:0003914!2.93e-08!118;UBERON:0000490!6.22e-08!138;UBERON:0003104!1.00e-07!238;UBERON:0009142!1.00e-07!238;UBERON:0000063!1.14e-07!97;UBERON:0002100!3.05e-07!216;UBERON:0005177!5.13e-07!107;UBERON:0002049!8.09e-07!79;UBERON:0007798!8.09e-07!79;UBERON:0004211!9.74e-07!16;UBERON:0001285!9.74e-07!16;UBERON:0007684!9.74e-07!16;UBERON:0003220!9.74e-07!16;UBERON:0004208!9.74e-07!16 | |ontology_enrichment_uberon=UBERON:0000119!6.88e-09!312;UBERON:0000483!2.33e-08!309;UBERON:0003914!2.93e-08!118;UBERON:0000490!6.22e-08!138;UBERON:0003104!1.00e-07!238;UBERON:0009142!1.00e-07!238;UBERON:0000063!1.14e-07!97;UBERON:0002100!3.05e-07!216;UBERON:0005177!5.13e-07!107;UBERON:0002049!8.09e-07!79;UBERON:0007798!8.09e-07!79;UBERON:0004211!9.74e-07!16;UBERON:0001285!9.74e-07!16;UBERON:0007684!9.74e-07!16;UBERON:0003220!9.74e-07!16;UBERON:0004208!9.74e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.79e-07;15!UBERON:0004819;4.79e-07;15!UBERON:0001285;4.79e-07;15!UBERON:0007684;4.79e-07;15!UBERON:0001851;8.43e-07;15!UBERON:0000353;8.84e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0006555;4.79e-07;15!UBERON:0004819;4.79e-07;15!UBERON:0001285;4.79e-07;15!UBERON:0007684;4.79e-07;15!UBERON:0001851;8.43e-07;15!UBERON:0000353;8.84e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,8.62e-09,309;UBERON:0000483,2.91e-08,306;UBERON:0003914,3.43e-08,117;UBERON:0000490,1.26e-07,148;UBERON:0007503,1.58e-07,78;UBERON:0002100,4.65e-07,199;UBERON:0004211,6.31e-07,15;UBERON:0009773,6.31e-07,15;UBERON:0001231,6.31e-07,15;UBERON:0001285,6.31e-07,15;UBERON:0007684,6.31e-07,15;UBERON:0004208,6.31e-07,15;UBERON:0002049,7.22e-07,78;UBERON:0007798,7.22e-07,78;UBERON:0003104,7.55e-07,160;UBERON:0009142,7.55e-07,160;UBERON:0005177,8.90e-07,101 | |||
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| ||
|short_description=p4@PFN1 | |short_description=p4@PFN1 | ||
}} | }} |
Latest revision as of 02:29, 16 September 2015
Short description: | p4@PFN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PFN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000225655_5end |
EntrezGene: | PFN1 |
HGNC: | 8881 |
UniProt: | P07737 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.04e-16 | 250 |
epithelial cell | 5.64e-11 | 253 |
mesodermal cell | 5.38e-10 | 121 |
neuron associated cell | 3.60e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 3.60e-08 | 17 |
neural cell | 4.13e-08 | 25 |
neurectodermal cell | 4.29e-08 | 59 |
glial cell (sensu Vertebrata) | 3.45e-07 | 15 |
glial cell | 3.45e-07 | 15 |
glioblast | 3.45e-07 | 15 |
glioblast (sensu Vertebrata) | 3.45e-07 | 15 |
migratory neural crest cell | 3.67e-07 | 41 |
electrically responsive cell | 4.56e-07 | 61 |
electrically active cell | 4.56e-07 | 61 |
ectodermal cell | 4.98e-07 | 72 |
epithelial cell of nephron | 6.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell layer | 8.62e-09 | 309 |
epithelium | 2.91e-08 | 306 |
epithelial tube | 3.43e-08 | 117 |
unilaminar epithelium | 1.26e-07 | 148 |
epithelial vesicle | 1.58e-07 | 78 |
trunk | 4.65e-07 | 199 |
nephron epithelium | 6.31e-07 | 15 |
renal tubule | 6.31e-07 | 15 |
nephron tubule | 6.31e-07 | 15 |
nephron | 6.31e-07 | 15 |
uriniferous tubule | 6.31e-07 | 15 |
nephrogenic mesenchyme | 6.31e-07 | 15 |
vasculature | 7.22e-07 | 78 |
vascular system | 7.22e-07 | 78 |
mesenchyme | 7.55e-07 | 160 |
entire embryonic mesenchyme | 7.55e-07 | 160 |
trunk region element | 8.90e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.53e-14 | 235 |
disease of cellular proliferation | 2.99e-14 | 239 |
organ system cancer | 1.50e-08 | 137 |
cell type cancer | 3.50e-07 | 143 |