FFCP PHASE1:Hg19::chr6:72970389..72970411,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463023,uc011dyf.1_5end | |association_with_transcript=0bp_to_ENST00000463023,uc011dyf.1_5end | ||
|cluster_id=chr6:72970389..72970411,+ | |||
|coexpression_cluster_id=C1926 | |coexpression_cluster_id=C1926 | ||
|description=CAGE_peak_6_at_RIMS1_5end | |description=CAGE_peak_6_at_RIMS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002543!1.14e-10!6;CL:0000055!1.49e-08!180;CL:0002139!1.55e-08!24;CL:0000057!4.59e-08!75;CL:0002590!2.25e-07!3;CL:0000071!8.52e-07!18;CL:0002546!8.52e-07!18 | |ontology_enrichment_celltype=CL:0002543!1.14e-10!6;CL:0000055!1.49e-08!180;CL:0002139!1.55e-08!24;CL:0000057!4.59e-08!75;CL:0002590!2.25e-07!3;CL:0000071!8.52e-07!18;CL:0002546!8.52e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002590;4.48e-20;3!CL:0002549;5.33e-14;2!CL:0002556;1.01e-09;6!CL:0000708;4.35e-09;3!CL:0000222;4.88e-08;1 | |ontology_enrichment_celltype_v019=CL:0002590;4.48e-20;3!CL:0002549;5.33e-14;2!CL:0002556;1.01e-09;6!CL:0000708;4.35e-09;3!CL:0000222;4.88e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002590,2.77e-20,3;CL:0002549,4.85e-14,2;CL:0002556,1.43e-09,6;CL:0000708,7.72e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.74e-08;1!UBERON:0003852;9.74e-08;1 | |ontology_enrichment_development_v019=UBERON:0003099;9.74e-08;1!UBERON:0003852;9.74e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2513;6.58e-08;1!DOID:3112;7.50e-08;1 | |ontology_enrichment_disease_v019=DOID:2513;6.58e-08;1!DOID:3112;7.50e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,6.37e-08,1;DOID:3112,7.26e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005284!3.62e-11!5;UBERON:0002049!1.21e-10!79;UBERON:0007798!1.21e-10!79;UBERON:0001638!6.69e-09!9;UBERON:0003920!6.69e-09!9;UBERON:0004582!6.69e-09!9;UBERON:0004535!3.10e-08!110;UBERON:0001009!8.27e-08!113;UBERON:0000055!6.96e-07!69;UBERON:0001986!8.52e-07!18;UBERON:0004638!8.52e-07!18;UBERON:0004852!8.52e-07!18 | |ontology_enrichment_uberon=UBERON:0005284!3.62e-11!5;UBERON:0002049!1.21e-10!79;UBERON:0007798!1.21e-10!79;UBERON:0001638!6.69e-09!9;UBERON:0003920!6.69e-09!9;UBERON:0004582!6.69e-09!9;UBERON:0004535!3.10e-08!110;UBERON:0001009!8.27e-08!113;UBERON:0000055!6.96e-07!69;UBERON:0001986!8.52e-07!18;UBERON:0004638!8.52e-07!18;UBERON:0004852!8.52e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0005284;2.82e-32;5!UBERON:0006876;1.37e-14;11!UBERON:0005629;5.33e-14;2!UBERON:0005358;5.33e-14;2!UBERON:0001886;5.33e-14;2!UBERON:0004086;5.33e-14;2!UBERON:0005282;5.33e-14;2!UBERON:0005281;5.33e-14;2!UBERON:0001758;1.01e-09;6!UBERON:0003672;1.01e-09;6!UBERON:0011137;3.59e-09;11!UBERON:0010323;3.59e-09;11!UBERON:0003210;4.35e-09;3!UBERON:0003104;9.48e-09;7!UBERON:0009142;9.48e-09;7!UBERON:0003129;2.11e-08;7!UBERON:0007195;9.74e-08;1!UBERON:0005705;9.74e-08;1!UBERON:0008193;9.74e-08;1!UBERON:0010912;9.74e-08;1!UBERON:0002514;9.74e-08;1!UBERON:0003457;9.74e-08;1!UBERON:0008907;9.74e-08;1!UBERON:0008001;9.74e-08;1!UBERON:0007213;9.74e-08;1!UBERON:0009891;9.74e-08;1!UBERON:0007914;9.74e-08;1!UBERON:0007375;9.74e-08;1!UBERON:0003323;9.74e-08;1!UBERON:0010258;9.74e-08;1!UBERON:0005253;9.74e-08;1!UBERON:0007842;9.74e-08;1!UBERON:0002397;9.74e-08;1!UBERON:0003113;9.74e-08;1!UBERON:0003277;9.74e-08;1!UBERON:0001709;9.74e-08;1!UBERON:0002244;9.74e-08;1!UBERON:0005620;9.74e-08;1!UBERON:0010364;9.74e-08;1!UBERON:0004288;9.74e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0005284;2.82e-32;5!UBERON:0006876;1.37e-14;11!UBERON:0005629;5.33e-14;2!UBERON:0005358;5.33e-14;2!UBERON:0001886;5.33e-14;2!UBERON:0004086;5.33e-14;2!UBERON:0005282;5.33e-14;2!UBERON:0005281;5.33e-14;2!UBERON:0001758;1.01e-09;6!UBERON:0003672;1.01e-09;6!UBERON:0011137;3.59e-09;11!UBERON:0010323;3.59e-09;11!UBERON:0003210;4.35e-09;3!UBERON:0003104;9.48e-09;7!UBERON:0009142;9.48e-09;7!UBERON:0003129;2.11e-08;7!UBERON:0007195;9.74e-08;1!UBERON:0005705;9.74e-08;1!UBERON:0008193;9.74e-08;1!UBERON:0010912;9.74e-08;1!UBERON:0002514;9.74e-08;1!UBERON:0003457;9.74e-08;1!UBERON:0008907;9.74e-08;1!UBERON:0008001;9.74e-08;1!UBERON:0007213;9.74e-08;1!UBERON:0009891;9.74e-08;1!UBERON:0007914;9.74e-08;1!UBERON:0007375;9.74e-08;1!UBERON:0003323;9.74e-08;1!UBERON:0010258;9.74e-08;1!UBERON:0005253;9.74e-08;1!UBERON:0007842;9.74e-08;1!UBERON:0002397;9.74e-08;1!UBERON:0003113;9.74e-08;1!UBERON:0003277;9.74e-08;1!UBERON:0001709;9.74e-08;1!UBERON:0002244;9.74e-08;1!UBERON:0005620;9.74e-08;1!UBERON:0010364;9.74e-08;1!UBERON:0004288;9.74e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,1.59e-32,5;UBERON:0006876,1.06e-14,11;UBERON:0005629,4.85e-14,2;UBERON:0005358,4.85e-14,2;UBERON:0001886,4.85e-14,2;UBERON:0004086,4.85e-14,2;UBERON:0005282,4.85e-14,2;UBERON:0005281,4.85e-14,2;UBERON:0001758,1.43e-09,6;UBERON:0003672,1.43e-09,6;UBERON:0010323,4.37e-09,11;UBERON:0003210,7.72e-09,3;UBERON:0003129,2.84e-08,7;UBERON:0005705,8.28e-08,1;UBERON:0008193,8.28e-08,1;UBERON:0010912,8.28e-08,1;UBERON:0002514,8.28e-08,1;UBERON:0003457,8.28e-08,1;UBERON:0008907,8.28e-08,1;UBERON:0008001,8.28e-08,1;UBERON:0007213,8.28e-08,1;UBERON:0009891,8.28e-08,1;UBERON:0007914,8.28e-08,1;UBERON:0009292,8.28e-08,1;UBERON:0003099,8.28e-08,1;UBERON:0007375,8.28e-08,1;UBERON:0003323,8.28e-08,1;UBERON:0010258,8.28e-08,1;UBERON:0007842,8.28e-08,1;UBERON:0009494,8.28e-08,1;UBERON:0010042,8.28e-08,1;UBERON:0010045,8.28e-08,1;UBERON:0010259,8.28e-08,1;UBERON:0010359,8.28e-08,1;UBERON:0009526,8.28e-08,1;UBERON:0002397,8.28e-08,1;UBERON:0003113,8.28e-08,1;UBERON:0003277,8.28e-08,1;UBERON:0001709,8.28e-08,1;UBERON:0004066,8.28e-08,1;UBERON:0002244,8.28e-08,1;UBERON:0005620,8.28e-08,1;UBERON:0004362,8.28e-08,1;UBERON:0010364,8.28e-08,1;UBERON:0010046,8.28e-08,1;UBERON:0005868,8.28e-08,1;UBERON:0007238,8.28e-08,1;UBERON:0004288,8.28e-08,1;UBERON:0004068,8.28e-08,1;UBERON:0010334,8.28e-08,1;UBERON:0003852,8.28e-08,1;UBERON:0010253,8.28e-08,1;UBERON:0007195,1.01e-07,1;UBERON:0011137,3.66e-07,14;UBERON:0000165,4.48e-07,29;UBERON:0000930,4.48e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,0,0,0,0,0.246242116153576,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0.805658634218294,1.52054421143703,0,0,0,0.357198913136319,0.44905874525234,0.225222960966644,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,2.4666754841716,0,0.134710672069688,0.163461903113459,2.72443369760877,6.33793516927999,0,0,0,0,0.117434498643765,0,0,1.22492502752936,0.368502951935304,0.103325781175765,1.18800285728205,0,0,0,1.17835279767846,1.12606667884768,1.10825646193673,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0.323292113637624,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505754070234305,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0,1.0267360014933,0,0,0,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,13.4189919075286,1.14861935834114,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,0,0,0,0.819989904948992,4.8151375956435,0,2.0694614258501,0.664225598535437,0.737476674166813,0.347534457872331,1.56640925970192,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12922412126809,0,0,0.286249773483982,14.8863347743867,34.8017367190598,1.90630193923825,0,0,0,0,0,0,0,1.41527737101321,0,0,0,0.243713489631284,0,0,0,0,0,0,1.75380354101505,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97663340258892,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,29.0225265925897,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,46.5363081924805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82140754952547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,3.93052602024232,0,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,0,0,0,0,0.246242116153576,0,0,0,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0.805658634218294,1.52054421143703,0,0,0,0.357198913136319,0.44905874525234,0.225222960966644,3.06633274931766,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,2.4666754841716,0,0.134710672069688,0.163461903113459,2.72443369760877,6.33793516927999,0,0,0,0,0.117434498643765,0,0,1.22492502752936,0.368502951935304,0.103325781175765,1.18800285728205,0,0,0,1.17835279767846,1.12606667884768,1.10825646193673,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0.323292113637624,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505754070234305,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0,1.0267360014933,0,0,0,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,13.4189919075286,1.14861935834114,0,0.723906533337896,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,0,0,0,0.819989904948992,4.8151375956435,0,2.0694614258501,0.664225598535437,0.737476674166813,0.347534457872331,1.56640925970192,0.686286847621712,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12922412126809,0,0,0.286249773483982,14.8863347743867,34.8017367190598,1.90630193923825,0,0,0,0,0,0,0,1.41527737101321,0,0,0,0.243713489631284,0,0,0,0,0,0,1.75380354101505,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97663340258892,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.50313580350515,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60011105865261,0,0,29.0225265925897,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,46.5363081924805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82140754952547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,3.93052602024232,0,0,0,0,0,0,0.548257766857182,0,0,0.255524855279191,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@RIMS1 | |short_description=p6@RIMS1 | ||
}} | }} |
Latest revision as of 16:50, 19 September 2015
Short description: | p6@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RIMS1_5end |
Coexpression cluster: | C1926_myxofibrosarcoma_Smooth_mesodermal_Multipotent_Fibroblast_basal_papillary |
Association with transcript: | 0bp_to_ENST00000463023, uc011dyf.1_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 2.77e-20 | 3 |
fibroblast of choroid plexus | 4.85e-14 | 2 |
fibroblast of periodontium | 1.43e-09 | 6 |
leptomeningeal cell | 7.72e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.37e-08 | 1 |
papillary adenocarcinoma | 7.26e-08 | 1 |