FFCP PHASE1:Hg19::chr5:135378750..135378757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135378750..135378757,+ | |||
|coexpression_cluster_id=C598 | |coexpression_cluster_id=C598 | ||
|description=CAGE_peak_at_chr5:135378750..135378757,+ | |description=CAGE_peak_at_chr5:135378750..135378757,+ | ||
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|ontology_enrichment_celltype=CL:0000054!4.39e-12!2;CL:0000137!4.39e-12!2;CL:0000092!4.39e-12!2;CL:0002573!6.21e-08!2 | |ontology_enrichment_celltype=CL:0000054!4.39e-12!2;CL:0000137!4.39e-12!2;CL:0000092!4.39e-12!2;CL:0002573!6.21e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.81e-21;2!CL:0000137;3.81e-21;2!CL:0000092;3.81e-21;2!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4!CL:0000128;6.04e-07;7!CL:0000126;6.04e-07;7!CL:0000127;6.04e-07;7 | |ontology_enrichment_celltype_v019=CL:0000054;3.81e-21;2!CL:0000137;3.81e-21;2!CL:0000092;3.81e-21;2!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4!CL:0000128;6.04e-07;7!CL:0000126;6.04e-07;7!CL:0000127;6.04e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.81e-21,2;CL:0000137,3.81e-21,2;CL:0000092,3.81e-21,2;CL:0000306,3.10e-11,4;CL:0002222,3.10e-11,4;CL:0002224,3.10e-11,4;CL:0000128,6.04e-07,7;CL:0000126,6.04e-07,7;CL:0000127,6.04e-07,7;CL:0002453,6.04e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:200!4.39e-12!2;DOID:4305!4.39e-12!2;DOID:201!7.57e-09!6;DOID:0060100!7.57e-09!6;DOID:3347!7.35e-07!1;DOID:0060085!8.67e-07!1;DOID:3165!8.67e-07!1;DOID:0060121!8.67e-07!1;DOID:2438!8.67e-07!1;DOID:4418!8.67e-07!1 | |ontology_enrichment_disease=DOID:200!4.39e-12!2;DOID:4305!4.39e-12!2;DOID:201!7.57e-09!6;DOID:0060100!7.57e-09!6;DOID:3347!7.35e-07!1;DOID:0060085!8.67e-07!1;DOID:3165!8.67e-07!1;DOID:0060121!8.67e-07!1;DOID:2438!8.67e-07!1;DOID:4418!8.67e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:200;3.81e-21;2!DOID:4305;3.81e-21;2!DOID:201;5.92e-08;6!DOID:0060100;5.92e-08;6 | |ontology_enrichment_disease_v019=DOID:200;3.81e-21;2!DOID:4305;3.81e-21;2!DOID:201;5.92e-08;6!DOID:0060100;5.92e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:200,3.81e-21,2;DOID:4305,3.81e-21,2;DOID:201,5.92e-08,6;DOID:0060100,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.18e-07!11 | |ontology_enrichment_uberon=UBERON:0007625!1.18e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,3.10e-11,4;UBERON:0005389,3.10e-11,4;UBERON:0000484,3.10e-11,4;UBERON:0002546,3.10e-11,4;UBERON:0000965,3.10e-11,4;UBERON:0001803,3.10e-11,4;UBERON:0003073,3.10e-11,4;UBERON:0005426,3.10e-11,4 | |||
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|short_description=p@chr5:135378750..135378757,+ | |short_description=p@chr5:135378750..135378757,+ | ||
}} | }} |
Latest revision as of 10:01, 30 July 2015
Short description: | p@chr5:135378750..135378757, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:135378750..135378757, + |
Coexpression cluster: | C598_fibrosarcoma_osteoclastoma_fibrous_astrocytoma_large_liposarcoma_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.81e-21 | 2 |
osteocyte | 3.81e-21 | 2 |
osteoclast | 3.81e-21 | 2 |
crystallin accumulating cell | 3.10e-11 | 4 |
vertebrate lens cell | 3.10e-11 | 4 |
lens epithelial cell | 3.10e-11 | 4 |
oligodendrocyte | 6.04e-07 | 7 |
macroglial cell | 6.04e-07 | 7 |
astrocyte | 6.04e-07 | 7 |
oligodendrocyte precursor cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 3.10e-11 | 4 |
transparent eye structure | 3.10e-11 | 4 |
simple cuboidal epithelium | 3.10e-11 | 4 |
cranial placode | 3.10e-11 | 4 |
lens of camera-type eye | 3.10e-11 | 4 |
epithelium of lens | 3.10e-11 | 4 |
lens placode | 3.10e-11 | 4 |
lens vesicle | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 3.81e-21 | 2 |
bone giant cell tumor | 3.81e-21 | 2 |
connective tissue cancer | 5.92e-08 | 6 |
musculoskeletal system cancer | 5.92e-08 | 6 |