FFCP PHASE1:Hg19::chr20:5903983..5904030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5903983..5904030,- | |||
|coexpression_cluster_id=C377 | |coexpression_cluster_id=C377 | ||
|description=CAGE_peak_at_chr20:5903983..5904030,- | |description=CAGE_peak_at_chr20:5903983..5904030,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;8.75e-07;1!CL:0000164;8.75e-07;1!CL:0000502;8.75e-07;1!CL:0000172;8.75e-07;1!CL:0000173;8.75e-07;1 | |ontology_enrichment_celltype_v019=CL:0000167;8.75e-07;1!CL:0000164;8.75e-07;1!CL:0000502;8.75e-07;1!CL:0000172;8.75e-07;1!CL:0000173;8.75e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,8.27e-07,1;CL:0000164,8.27e-07,1;CL:0000502,8.27e-07,1;CL:0000172,8.27e-07,1;CL:0000173,8.27e-07,1;CL:0002351,8.27e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.31e-18;3!UBERON:0006601;4.27e-08;82!CL:0002351;8.75e-07;1!UBERON:0010227;8.75e-07;1 | |ontology_enrichment_development_v019=UBERON:0006215;7.31e-18;3!UBERON:0006601;4.27e-08;82!CL:0002351;8.75e-07;1!UBERON:0010227;8.75e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;6.42e-07;1!DOID:1357;6.42e-07;1!DOID:4430;8.75e-07;1 | |ontology_enrichment_disease_v019=DOID:0050619;6.42e-07;1!DOID:1357;6.42e-07;1!DOID:4430;8.75e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.24e-07,1;DOID:1357,6.24e-07,1;DOID:4430,8.27e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.36e-56!57;UBERON:0005068!3.36e-56!57;UBERON:0006241!3.36e-56!57;UBERON:0007135!3.36e-56!57;UBERON:0000073!5.15e-52!94;UBERON:0001016!5.15e-52!94;UBERON:0001017!4.20e-51!82;UBERON:0002616!1.57e-48!59;UBERON:0005743!4.77e-48!86;UBERON:0002780!2.36e-46!41;UBERON:0001890!2.36e-46!41;UBERON:0006240!2.36e-46!41;UBERON:0000955!6.53e-46!69;UBERON:0006238!6.53e-46!69;UBERON:0003080!5.11e-45!42;UBERON:0003075!2.49e-40!86;UBERON:0007284!2.49e-40!86;UBERON:0002346!6.62e-38!90;UBERON:0002020!8.37e-37!34;UBERON:0003528!8.37e-37!34;UBERON:0001893!1.10e-36!34;UBERON:0001869!1.51e-36!32;UBERON:0007023!1.06e-35!115;UBERON:0002791!5.54e-35!33;UBERON:0002619!1.21e-32!22;UBERON:0003056!6.31e-30!61;UBERON:0001950!2.62e-29!20;UBERON:0000956!3.97e-28!25;UBERON:0000203!3.97e-28!25;UBERON:0004121!1.24e-27!169;UBERON:0000924!1.32e-26!173;UBERON:0006601!1.32e-26!173;UBERON:0000033!3.24e-25!123;UBERON:0000153!2.11e-23!129;UBERON:0007811!2.11e-23!129;UBERON:0000025!1.22e-12!194;UBERON:0003076!4.25e-12!15;UBERON:0003057!4.25e-12!15;UBERON:0000200!1.52e-11!6;UBERON:0001871!2.59e-11!7;UBERON:0001894!4.64e-11!7;UBERON:0006222!4.64e-11!7;UBERON:0004733!3.27e-10!12;UBERON:0002028!3.27e-10!12;UBERON:0007277!3.27e-10!12;UBERON:0002308!5.03e-10!9;UBERON:0000125!5.03e-10!9;UBERON:0000349!5.23e-10!5;UBERON:0002420!5.81e-10!9;UBERON:0007245!5.81e-10!9;UBERON:0010009!5.81e-10!9;UBERON:0010011!5.81e-10!9;UBERON:0000454!5.81e-10!9;UBERON:0001872!6.10e-10!5;UBERON:0003296!1.41e-09!4;UBERON:0010133!1.41e-09!4;UBERON:0004111!2.41e-09!241;UBERON:0004732!2.70e-09!13;UBERON:0000369!1.43e-08!4;UBERON:0002435!1.43e-08!4;UBERON:0000204!1.43e-08!4;UBERON:0010082!1.43e-08!4;UBERON:0000064!2.16e-08!219;UBERON:0002680!2.17e-08!9;UBERON:0001895!2.17e-08!9;UBERON:0010092!2.17e-08!9;UBERON:0000481!2.09e-07!347;UBERON:0000483!3.61e-07!309;UBERON:0000988!4.89e-07!3;UBERON:0000119!5.68e-07!312;UBERON:0009663!6.40e-07!7;UBERON:0000477!7.37e-07!286;UBERON:0005383!8.06e-07!3;UBERON:0005382!8.06e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!3.36e-56!57;UBERON:0005068!3.36e-56!57;UBERON:0006241!3.36e-56!57;UBERON:0007135!3.36e-56!57;UBERON:0000073!5.15e-52!94;UBERON:0001016!5.15e-52!94;UBERON:0001017!4.20e-51!82;UBERON:0002616!1.57e-48!59;UBERON:0005743!4.77e-48!86;UBERON:0002780!2.36e-46!41;UBERON:0001890!2.36e-46!41;UBERON:0006240!2.36e-46!41;UBERON:0000955!6.53e-46!69;UBERON:0006238!6.53e-46!69;UBERON:0003080!5.11e-45!42;UBERON:0003075!2.49e-40!86;UBERON:0007284!2.49e-40!86;UBERON:0002346!6.62e-38!90;UBERON:0002020!8.37e-37!34;UBERON:0003528!8.37e-37!34;UBERON:0001893!1.10e-36!34;UBERON:0001869!1.51e-36!32;UBERON:0007023!1.06e-35!115;UBERON:0002791!5.54e-35!33;UBERON:0002619!1.21e-32!22;UBERON:0003056!6.31e-30!61;UBERON:0001950!2.62e-29!20;UBERON:0000956!3.97e-28!25;UBERON:0000203!3.97e-28!25;UBERON:0004121!1.24e-27!169;UBERON:0000924!1.32e-26!173;UBERON:0006601!1.32e-26!173;UBERON:0000033!3.24e-25!123;UBERON:0000153!2.11e-23!129;UBERON:0007811!2.11e-23!129;UBERON:0000025!1.22e-12!194;UBERON:0003076!4.25e-12!15;UBERON:0003057!4.25e-12!15;UBERON:0000200!1.52e-11!6;UBERON:0001871!2.59e-11!7;UBERON:0001894!4.64e-11!7;UBERON:0006222!4.64e-11!7;UBERON:0004733!3.27e-10!12;UBERON:0002028!3.27e-10!12;UBERON:0007277!3.27e-10!12;UBERON:0002308!5.03e-10!9;UBERON:0000125!5.03e-10!9;UBERON:0000349!5.23e-10!5;UBERON:0002420!5.81e-10!9;UBERON:0007245!5.81e-10!9;UBERON:0010009!5.81e-10!9;UBERON:0010011!5.81e-10!9;UBERON:0000454!5.81e-10!9;UBERON:0001872!6.10e-10!5;UBERON:0003296!1.41e-09!4;UBERON:0010133!1.41e-09!4;UBERON:0004111!2.41e-09!241;UBERON:0004732!2.70e-09!13;UBERON:0000369!1.43e-08!4;UBERON:0002435!1.43e-08!4;UBERON:0000204!1.43e-08!4;UBERON:0010082!1.43e-08!4;UBERON:0000064!2.16e-08!219;UBERON:0002680!2.17e-08!9;UBERON:0001895!2.17e-08!9;UBERON:0010092!2.17e-08!9;UBERON:0000481!2.09e-07!347;UBERON:0000483!3.61e-07!309;UBERON:0000988!4.89e-07!3;UBERON:0000119!5.68e-07!312;UBERON:0009663!6.40e-07!7;UBERON:0000477!7.37e-07!286;UBERON:0005383!8.06e-07!3;UBERON:0005382!8.06e-07!3 | ||
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|short_description=p@chr20:5903983..5904030,- | |short_description=p@chr20:5903983..5904030,- | ||
}} | }} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903983..5904030, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903983..5904030, - |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 8.27e-07 | 1 |
enteroendocrine cell | 8.27e-07 | 1 |
type D enteroendocrine cell | 8.27e-07 | 1 |
somatostatin secreting cell | 8.27e-07 | 1 |
pancreatic D cell | 8.27e-07 | 1 |
progenitor cell of endocrine pancreas | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.24e-07 | 1 |
maxillary sinus cancer | 6.24e-07 | 1 |
somatostatinoma | 8.27e-07 | 1 |