FFCP PHASE1:Hg19::chr4:38057720..38057727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:38057720..38057727,- | |||
|coexpression_cluster_id=C514 | |coexpression_cluster_id=C514 | ||
|description=CAGE_peak_at_chr4:38057720..38057727,- | |description=CAGE_peak_at_chr4:38057720..38057727,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0005020!2.17e-44!6;CL:0002138!2.17e-44!6;CL:0005022!2.17e-44!6;CL:0000115!6.12e-29!35;CL:0002139!2.03e-27!24;CL:0002078!9.32e-23!44;CL:0000213!2.90e-17!57;CL:0000215!2.90e-17!57;CL:0002144!2.80e-15!3;CL:1000612!3.97e-14!7;CL:1000746!3.97e-14!7;CL:0000666!1.40e-11!4;CL:0002188!1.40e-11!4;CL:0002681!7.46e-08!13;CL:0002584!7.46e-08!13;CL:0000222!1.54e-07!119 | |ontology_enrichment_celltype=CL:0005020!2.17e-44!6;CL:0002138!2.17e-44!6;CL:0005022!2.17e-44!6;CL:0000115!6.12e-29!35;CL:0002139!2.03e-27!24;CL:0002078!9.32e-23!44;CL:0000213!2.90e-17!57;CL:0000215!2.90e-17!57;CL:0002144!2.80e-15!3;CL:1000612!3.97e-14!7;CL:1000746!3.97e-14!7;CL:0000666!1.40e-11!4;CL:0002188!1.40e-11!4;CL:0002681!7.46e-08!13;CL:0002584!7.46e-08!13;CL:0000222!1.54e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002138;4.21e-43;6!CL:0002139;2.11e-19;24!CL:0000115;1.81e-17;36!CL:0002078;3.51e-13;45!CL:0002144;9.90e-11;3!CL:0000213;1.39e-07;58!CL:0000215;1.39e-07;58!CL:0002188;6.04e-07;5 | |ontology_enrichment_celltype_v019=CL:0002138;4.21e-43;6!CL:0002139;2.11e-19;24!CL:0000115;1.81e-17;36!CL:0002078;3.51e-13;45!CL:0002144;9.90e-11;3!CL:0000213;1.39e-07;58!CL:0000215;1.39e-07;58!CL:0002188;6.04e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.21e-43,6;CL:0002138,4.21e-43,6;CL:0005022,4.21e-43,6;CL:0000115,4.78e-20,36;CL:0002139,1.92e-19,24;CL:0002078,3.99e-16,45;CL:0000213,1.35e-12,58;CL:0000215,1.35e-12,58;CL:0002144,8.17e-11,3;CL:0002188,5.70e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;4.21e-43;6 | |ontology_enrichment_development_v019=CL:0005022;4.21e-43;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!2.55e-33!8;UBERON:0004536!2.55e-33!8;UBERON:0006558!2.55e-33!8;UBERON:0002465!1.15e-26!10;UBERON:0001915!2.80e-15!3;UBERON:0001982!2.80e-15!3;UBERON:0000074!3.97e-14!7;UBERON:0001229!3.97e-14!7;UBERON:0001230!3.97e-14!7;UBERON:0005749!3.97e-14!7;UBERON:0004199!3.97e-14!7;UBERON:0004209!3.97e-14!7;UBERON:0004198!3.97e-14!7;UBERON:0004535!4.29e-12!110;UBERON:0001009!1.00e-11!113;UBERON:0000055!6.00e-09!69;UBERON:0003887!3.59e-08!21;UBERON:0001225!7.46e-08!13;UBERON:0008987!7.46e-08!13;UBERON:0002049!1.08e-07!79;UBERON:0007798!1.08e-07!79;UBERON:0000178!6.24e-07!15;UBERON:0000179!6.24e-07!15;UBERON:0000463!6.24e-07!15 | |ontology_enrichment_uberon=UBERON:0001473!2.55e-33!8;UBERON:0004536!2.55e-33!8;UBERON:0006558!2.55e-33!8;UBERON:0002465!1.15e-26!10;UBERON:0001915!2.80e-15!3;UBERON:0001982!2.80e-15!3;UBERON:0000074!3.97e-14!7;UBERON:0001229!3.97e-14!7;UBERON:0001230!3.97e-14!7;UBERON:0005749!3.97e-14!7;UBERON:0004199!3.97e-14!7;UBERON:0004209!3.97e-14!7;UBERON:0004198!3.97e-14!7;UBERON:0004535!4.29e-12!110;UBERON:0001009!1.00e-11!113;UBERON:0000055!6.00e-09!69;UBERON:0003887!3.59e-08!21;UBERON:0001225!7.46e-08!13;UBERON:0008987!7.46e-08!13;UBERON:0002049!1.08e-07!79;UBERON:0007798!1.08e-07!79;UBERON:0000178!6.24e-07!15;UBERON:0000179!6.24e-07!15;UBERON:0000463!6.24e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.42e-32;8!UBERON:0004536;1.42e-32;8!UBERON:0006558;1.42e-32;8!UBERON:0002465;3.03e-26;10!UBERON:0002193;2.71e-18;42!UBERON:0010523;9.90e-11;3!UBERON:0001915;9.90e-11;3!UBERON:0001982;9.90e-11;3!UBERON:0002405;3.26e-10;27!UBERON:0000178;1.65e-08;15!UBERON:0000179;1.65e-08;15!UBERON:0000463;1.65e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0001473;1.42e-32;8!UBERON:0004536;1.42e-32;8!UBERON:0006558;1.42e-32;8!UBERON:0002465;3.03e-26;10!UBERON:0002193;2.71e-18;42!UBERON:0010523;9.90e-11;3!UBERON:0001915;9.90e-11;3!UBERON:0001982;9.90e-11;3!UBERON:0002405;3.26e-10;27!UBERON:0000178;1.65e-08;15!UBERON:0000179;1.65e-08;15!UBERON:0000463;1.65e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.42e-32,8;UBERON:0004536,1.42e-32,8;UBERON:0006558,1.42e-32,8;UBERON:0002465,3.03e-26,10;UBERON:0010523,8.17e-11,3;UBERON:0001915,8.17e-11,3;UBERON:0001982,8.17e-11,3;UBERON:0004535,1.39e-09,109;UBERON:0001009,2.49e-09,112;UBERON:0000178,1.85e-08,15;UBERON:0000179,1.85e-08,15;UBERON:0000463,1.85e-08,15;UBERON:0000055,3.56e-07,68;UBERON:0002193,8.55e-07,108 | |||
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|short_description=p@chr4:38057720..38057727,- | |short_description=p@chr4:38057720..38057727,- | ||
}} | }} |
Latest revision as of 04:56, 30 July 2015
Short description: | p@chr4:38057720..38057727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:38057720..38057727, - |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.21e-43 | 6 |
endothelial cell of lymphatic vessel | 4.21e-43 | 6 |
vascular lymphangioblast | 4.21e-43 | 6 |
endothelial cell | 4.78e-20 | 36 |
endothelial cell of vascular tree | 1.92e-19 | 24 |
meso-epithelial cell | 3.99e-16 | 45 |
lining cell | 1.35e-12 | 58 |
barrier cell | 1.35e-12 | 58 |
capillary endothelial cell | 8.17e-11 | 3 |
glomerular endothelial cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.42e-32 | 8 |
lymph vasculature | 1.42e-32 | 8 |
lymphatic part of lymphoid system | 1.42e-32 | 8 |
lymphoid system | 3.03e-26 | 10 |
microcirculatory vessel | 8.17e-11 | 3 |
endothelium of capillary | 8.17e-11 | 3 |
capillary | 8.17e-11 | 3 |
cardiovascular system | 1.39e-09 | 109 |
circulatory system | 2.49e-09 | 112 |
blood | 1.85e-08 | 15 |
haemolymphatic fluid | 1.85e-08 | 15 |
organism substance | 1.85e-08 | 15 |
vessel | 3.56e-07 | 68 |
hemolymphoid system | 8.55e-07 | 108 |