FFCP PHASE1:Hg19::chr21:44589339..44589372,-: Difference between revisions
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|id=chr21:44589339..44589372,-
|short_description=p@chr21:44589339..44589372,-
|description=CAGE_peak_at_chr21:44589339..44589372,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:44589339..44589372,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_at_chr21:44589339..44589372,- | |||
|id=chr21:44589339..44589372,- | |||
|ontology_enrichment_celltype=CL:0002322!5.85e-40!5;CL:0000306!9.75e-14!4;CL:0002222!9.75e-14!4;CL:0002224!9.75e-14!4;CL:0000148!6.74e-12!10;CL:0000541!6.74e-12!10;CL:0000075!1.18e-11!27;CL:0000147!1.18e-08!14;CL:0000325!4.84e-08!39 | |||
|ontology_enrichment_celltype_v019=CL:0000306;6.60e-50;4!CL:0002222;6.60e-50;4!CL:0002224;6.60e-50;4!CL:0000075;2.22e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,6.60e-50,4;CL:0002222,6.60e-50,4;CL:0002224,6.60e-50,4;CL:0000075,2.22e-08,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010077!9.75e-14!4;UBERON:0005389!9.75e-14!4;UBERON:0000484!9.75e-14!4;UBERON:0002546!9.75e-14!4;UBERON:0000965!9.75e-14!4;UBERON:0001803!9.75e-14!4;UBERON:0003073!9.75e-14!4;UBERON:0005426!9.75e-14!4;UBERON:0000970!1.88e-10!20;UBERON:0002104!5.79e-10!21;UBERON:0000020!4.09e-09!23;UBERON:0001032!9.62e-09!24;UBERON:0004456!9.62e-09!24;UBERON:0000076!2.61e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;6.60e-50;4!UBERON:0005389;6.60e-50;4!UBERON:0000484;6.60e-50;4!UBERON:0000965;6.60e-50;4!UBERON:0001803;6.60e-50;4!UBERON:0000970;4.26e-23;20!UBERON:0002104;4.76e-22;21!UBERON:0000020;3.18e-20;23!UBERON:0001032;2.00e-19;24!UBERON:0004456;2.00e-19;24!UBERON:0007625;5.63e-19;11!UBERON:0001801;3.66e-15;14!UBERON:0000019;1.81e-11;19!UBERON:0000047;1.81e-11;19!UBERON:0004088;1.81e-11;19!UBERON:0010230;1.81e-11;19!UBERON:0001456;1.77e-10;21!UBERON:0010371;3.69e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,6.60e-50,4;UBERON:0005389,6.60e-50,4;UBERON:0000484,6.60e-50,4;UBERON:0002546,6.60e-50,4;UBERON:0000965,6.60e-50,4;UBERON:0001803,6.60e-50,4;UBERON:0003073,6.60e-50,4;UBERON:0005426,6.60e-50,4;UBERON:0000076,1.26e-25,8;UBERON:0000970,4.76e-22,21;UBERON:0002104,4.76e-22,21;UBERON:0000020,2.00e-19,24;UBERON:0001032,2.00e-19,24;UBERON:0004456,2.00e-19,24;UBERON:0007625,5.63e-19,11;UBERON:0001801,3.66e-15,14;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0001456,4.74e-10,22;UBERON:0005085,1.99e-07,31 | |||
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|short_description=p@chr21:44589339..44589372,- | |||
}} | }} |
Latest revision as of 18:16, 28 July 2015
Short description: | p@chr21:44589339..44589372, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44589339..44589372, - |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 6.60e-50 | 4 |
vertebrate lens cell | 6.60e-50 | 4 |
lens epithelial cell | 6.60e-50 | 4 |
columnar/cuboidal epithelial cell | 2.22e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 6.60e-50 | 4 |
transparent eye structure | 6.60e-50 | 4 |
simple cuboidal epithelium | 6.60e-50 | 4 |
cranial placode | 6.60e-50 | 4 |
lens of camera-type eye | 6.60e-50 | 4 |
epithelium of lens | 6.60e-50 | 4 |
lens placode | 6.60e-50 | 4 |
lens vesicle | 6.60e-50 | 4 |
external ectoderm | 1.26e-25 | 8 |
eye | 4.76e-22 | 21 |
visual system | 4.76e-22 | 21 |
sense organ | 2.00e-19 | 24 |
sensory system | 2.00e-19 | 24 |
entire sense organ system | 2.00e-19 | 24 |
pigment epithelium of eye | 5.63e-19 | 11 |
anterior segment of eyeball | 3.66e-15 | 14 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
face | 4.74e-10 | 22 |
ectodermal placode | 1.99e-07 | 31 |