FFCP PHASE1:Hg19::chr6:10556215..10556227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt=Q06430 | |UniProt=Q06430 | ||
|association_with_transcript=-12bp_to_ENST00000316170_5end | |association_with_transcript=-12bp_to_ENST00000316170_5end | ||
|cluster_id=chr6:10556215..10556227,+ | |||
|description=CAGE_peak_23_at_GCNT2_5end | |description=CAGE_peak_23_at_GCNT2_5end | ||
|id=chr6:10556215..10556227,+ | |id=chr6:10556215..10556227,+ | ||
|ontology_enrichment_celltype=CL:0002322!7.61e-12!5;CL:0002139!4.67e-10!24;CL:0000540!4.91e-10!6;CL:0000031!4.91e-10!6;CL:0000404!4.91e-10!6;CL:0002144!9.93e-09!3;CL:0000047!2.05e-07!8;CL:0000071!2.91e-07!18;CL:0002546!2.91e-07!18 | |ontology_enrichment_celltype=CL:0002322!7.61e-12!5;CL:0002139!4.67e-10!24;CL:0000540!4.91e-10!6;CL:0000031!4.91e-10!6;CL:0000404!4.91e-10!6;CL:0002144!9.93e-09!3;CL:0000047!2.05e-07!8;CL:0000071!2.91e-07!18;CL:0002546!2.91e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002144;2.89e-12;3 | |ontology_enrichment_celltype_v019=CL:0002144;2.89e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002144,2.59e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.25e-45;3!UBERON:0004874;7.05e-34;1 | |ontology_enrichment_development_v019=UBERON:0006215;6.25e-45;3!UBERON:0004874;7.05e-34;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000989;7.05e-34;1!UBERON:0008811;7.05e-34;1!UBERON:0002037;4.34e-23;6!UBERON:0000007;1.07e-17;2!UBERON:0002680;9.04e-16;9!UBERON:0001895;9.04e-16;9!UBERON:0010523;2.89e-12;3!UBERON:0001915;2.89e-12;3!UBERON:0001982;2.89e-12;3!UBERON:0004733;4.30e-12;12!UBERON:0002028;4.30e-12;12!UBERON:0004732;3.05e-11;13!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0001044;7.58e-07;6!UBERON:0003293;7.58e-07;6!UBERON:0003294;7.58e-07;6!UBERON:0010047;7.58e-07;6!UBERON:0003408;7.58e-07;6!UBERON:0000167;7.58e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000989;7.05e-34;1!UBERON:0008811;7.05e-34;1!UBERON:0002037;4.34e-23;6!UBERON:0000007;1.07e-17;2!UBERON:0002680;9.04e-16;9!UBERON:0001895;9.04e-16;9!UBERON:0010523;2.89e-12;3!UBERON:0001915;2.89e-12;3!UBERON:0001982;2.89e-12;3!UBERON:0004733;4.30e-12;12!UBERON:0002028;4.30e-12;12!UBERON:0004732;3.05e-11;13!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0001044;7.58e-07;6!UBERON:0003293;7.58e-07;6!UBERON:0003294;7.58e-07;6!UBERON:0010047;7.58e-07;6!UBERON:0003408;7.58e-07;6!UBERON:0000167;7.58e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,7.06e-34,1;UBERON:0008811,7.06e-34,1;UBERON:0006258,7.06e-34,1;UBERON:0005876,7.06e-34,1;UBERON:0004874,7.06e-34,1;UBERON:0002037,4.34e-23,6;UBERON:0006215,4.34e-23,6;UBERON:0000007,1.27e-17,2;UBERON:0002680,9.04e-16,9;UBERON:0001895,9.04e-16,9;UBERON:0010092,9.04e-16,9;UBERON:0010523,2.59e-12,3;UBERON:0001915,2.59e-12,3;UBERON:0001982,2.59e-12,3;UBERON:0004733,4.30e-12,12;UBERON:0002028,4.30e-12,12;UBERON:0007277,4.30e-12,12;UBERON:0004732,3.05e-11,13;UBERON:0003076,7.09e-10,15;UBERON:0003057,7.09e-10,15;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0007023,1.11e-07,114;UBERON:0001044,7.58e-07,6;UBERON:0003293,7.58e-07,6;UBERON:0003294,7.58e-07,6;UBERON:0010047,7.58e-07,6;UBERON:0000167,7.58e-07,6 | |||
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| ||
|short_description=p23@GCNT2 | |short_description=p23@GCNT2 | ||
}} | }} |
Latest revision as of 14:01, 19 September 2015
Short description: | p23@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000316170_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | Q06430 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 2.59e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
penis | 7.06e-34 | 1 |
intromittent organ | 7.06e-34 | 1 |
lateral plate mesenchyme | 7.06e-34 | 1 |
undifferentiated genital tubercle | 7.06e-34 | 1 |
somatopleure | 7.06e-34 | 1 |
cerebellum | 4.34e-23 | 6 |
rhombic lip | 4.34e-23 | 6 |
pituitary gland | 1.27e-17 | 2 |
regional part of metencephalon | 9.04e-16 | 9 |
metencephalon | 9.04e-16 | 9 |
future metencephalon | 9.04e-16 | 9 |
microcirculatory vessel | 2.59e-12 | 3 |
endothelium of capillary | 2.59e-12 | 3 |
capillary | 2.59e-12 | 3 |
segmental subdivision of hindbrain | 4.30e-12 | 12 |
hindbrain | 4.30e-12 | 12 |
presumptive hindbrain | 4.30e-12 | 12 |
segmental subdivision of nervous system | 3.05e-11 | 13 |
posterior neural tube | 7.09e-10 | 15 |
chordal neural plate | 7.09e-10 | 15 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
adult organism | 1.11e-07 | 114 |
saliva-secreting gland | 7.58e-07 | 6 |
gland of oral region | 7.58e-07 | 6 |
gland of foregut | 7.58e-07 | 6 |
oral gland | 7.58e-07 | 6 |
oral cavity | 7.58e-07 | 6 |