FFCP PHASE1:Hg19::chr3:151034583..151034678,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53836 | |EntrezGene=53836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4538 | |HGNC=4538 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BY21 | |UniProt=Q9BY21 | ||
|association_with_transcript=0bp_to_NM_023915,uc003eyt.2_5end | |association_with_transcript=0bp_to_NM_023915,uc003eyt.2_5end | ||
|cluster_id=chr3:151034583..151034678,- | |||
|description=CAGE_peak_1_at_GPR87_5end | |description=CAGE_peak_1_at_GPR87_5end | ||
|id=chr3:151034583..151034678,- | |id=chr3:151034583..151034678,- | ||
|ontology_enrichment_celltype=CL:0000066!1.59e-39!254;CL:0002076!1.12e-19!43;CL:0000223!3.11e-13!59;CL:0000076!2.73e-12!62;CL:0002368!2.97e-10!13;CL:0002251!2.31e-09!21;CL:0002159!4.96e-07!13;CL:0000077!8.12e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.59e-39!254;CL:0002076!1.12e-19!43;CL:0000223!3.11e-13!59;CL:0000076!2.73e-12!62;CL:0002368!2.97e-10!13;CL:0002251!2.31e-09!21;CL:0002159!4.96e-07!13;CL:0000077!8.12e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.60e-19;42!CL:0002251;3.30e-15;20!CL:0002368;1.16e-14;13!CL:0002159;1.99e-09;14!CL:0002202;2.44e-09;9!CL:0002632;2.44e-09;9!CL:0000154;1.18e-08;6!CL:0000622;4.09e-08;5!CL:0000150;1.81e-07;9!CL:0000076;4.83e-07;63 | |ontology_enrichment_celltype_v019=CL:0002076;9.60e-19;42!CL:0002251;3.30e-15;20!CL:0002368;1.16e-14;13!CL:0002159;1.99e-09;14!CL:0002202;2.44e-09;9!CL:0002632;2.44e-09;9!CL:0000154;1.18e-08;6!CL:0000622;4.09e-08;5!CL:0000150;1.81e-07;9!CL:0000076;4.83e-07;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.54e-44,253;CL:0002076,1.07e-25,42;CL:0000223,3.53e-18,58;CL:0002251,3.34e-15,20;CL:0002368,1.14e-14,13;CL:0000076,7.59e-14,63;CL:0002159,1.97e-09,14;CL:0002202,2.44e-09,9;CL:0002632,2.44e-09,9;CL:0000154,1.14e-08,6;CL:0000622,4.13e-08,5;CL:0000150,1.88e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;6.71e-10;58!UBERON:0008947;2.59e-07;29 | |ontology_enrichment_development_v019=CL:0000223;6.71e-10;58!UBERON:0008947;2.59e-07;29 | ||
|ontology_enrichment_disease=DOID:305!4.53e-17!106;DOID:1749!1.48e-13!14;DOID:0050687!1.01e-09!143 | |ontology_enrichment_disease=DOID:305!4.53e-17!106;DOID:1749!1.48e-13!14;DOID:0050687!1.01e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.35e-19;14 | |ontology_enrichment_disease_v019=DOID:1749;3.35e-19;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.17e-19,14;DOID:305,1.22e-18,106;DOID:0050687,3.05e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.75e-21!72;UBERON:0004119!5.21e-17!169;UBERON:0000925!5.21e-17!169;UBERON:0006595!5.21e-17!169;UBERON:0000065!1.78e-15!53;UBERON:0000161!3.05e-13!35;UBERON:0000072!2.14e-12!46;UBERON:0000464!3.37e-12!104;UBERON:0000077!6.96e-12!130;UBERON:0001007!4.84e-11!155;UBERON:0001555!4.84e-11!155;UBERON:0007026!4.84e-11!155;UBERON:0004921!1.95e-10!129;UBERON:0004185!1.95e-10!129;UBERON:0008947!3.15e-10!38;UBERON:0003258!3.15e-10!38;UBERON:0001008!6.07e-10!45;UBERON:0003064!7.64e-10!37;UBERON:0000166!8.59e-10!21;UBERON:0006554!1.68e-09!44;UBERON:0001041!5.40e-09!98;UBERON:0001557!9.56e-09!19;UBERON:0000466!1.34e-08!126;UBERON:0005156!1.52e-08!59;UBERON:0000990!1.52e-08!59;UBERON:0003104!1.66e-08!238;UBERON:0009142!1.66e-08!238;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0001737!2.23e-07!9;UBERON:0005157!2.50e-07!51;UBERON:0005181!3.37e-07!35;UBERON:0005153!3.76e-07!37;UBERON:0000165!5.50e-07!28;UBERON:0000930!5.50e-07!28;UBERON:0005178!7.50e-07!34;UBERON:0002224!7.50e-07!34;UBERON:0002553!9.50e-07!70 | |ontology_enrichment_uberon=UBERON:0001004!3.75e-21!72;UBERON:0004119!5.21e-17!169;UBERON:0000925!5.21e-17!169;UBERON:0006595!5.21e-17!169;UBERON:0000065!1.78e-15!53;UBERON:0000161!3.05e-13!35;UBERON:0000072!2.14e-12!46;UBERON:0000464!3.37e-12!104;UBERON:0000077!6.96e-12!130;UBERON:0001007!4.84e-11!155;UBERON:0001555!4.84e-11!155;UBERON:0007026!4.84e-11!155;UBERON:0004921!1.95e-10!129;UBERON:0004185!1.95e-10!129;UBERON:0008947!3.15e-10!38;UBERON:0003258!3.15e-10!38;UBERON:0001008!6.07e-10!45;UBERON:0003064!7.64e-10!37;UBERON:0000166!8.59e-10!21;UBERON:0006554!1.68e-09!44;UBERON:0001041!5.40e-09!98;UBERON:0001557!9.56e-09!19;UBERON:0000466!1.34e-08!126;UBERON:0005156!1.52e-08!59;UBERON:0000990!1.52e-08!59;UBERON:0003104!1.66e-08!238;UBERON:0009142!1.66e-08!238;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0001737!2.23e-07!9;UBERON:0005157!2.50e-07!51;UBERON:0005181!3.37e-07!35;UBERON:0005153!3.76e-07!37;UBERON:0000165!5.50e-07!28;UBERON:0000930!5.50e-07!28;UBERON:0005178!7.50e-07!34;UBERON:0002224!7.50e-07!34;UBERON:0002553!9.50e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.06e-11;44!UBERON:0001004;2.96e-11;65!UBERON:0000072;6.31e-11;37!UBERON:0000161;2.38e-10;19!UBERON:0000166;2.38e-10;19!UBERON:0001737;3.93e-10;9!UBERON:0001557;3.93e-10;9!UBERON:0000165;1.58e-09;28!UBERON:0000344;2.70e-08;20!UBERON:0000365;6.98e-08;5!UBERON:0005631;1.09e-07;10!UBERON:0000158;1.09e-07;10!UBERON:0007196;2.36e-07;15!UBERON:0001558;2.36e-07;15!UBERON:0000486;2.80e-07;12!UBERON:0005911;4.86e-07;36!UBERON:0003343;8.73e-07;4!UBERON:0004785;8.73e-07;4!UBERON:0003729;9.48e-07;13!UBERON:0004807;9.52e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000065;2.06e-11;44!UBERON:0001004;2.96e-11;65!UBERON:0000072;6.31e-11;37!UBERON:0000161;2.38e-10;19!UBERON:0000166;2.38e-10;19!UBERON:0001737;3.93e-10;9!UBERON:0001557;3.93e-10;9!UBERON:0000165;1.58e-09;28!UBERON:0000344;2.70e-08;20!UBERON:0000365;6.98e-08;5!UBERON:0005631;1.09e-07;10!UBERON:0000158;1.09e-07;10!UBERON:0007196;2.36e-07;15!UBERON:0001558;2.36e-07;15!UBERON:0000486;2.80e-07;12!UBERON:0005911;4.86e-07;36!UBERON:0003343;8.73e-07;4!UBERON:0004785;8.73e-07;4!UBERON:0003729;9.48e-07;13!UBERON:0004807;9.52e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.95e-22,74;UBERON:0004119,2.58e-21,160;UBERON:0000925,2.58e-21,160;UBERON:0006595,2.58e-21,160;UBERON:0000065,7.88e-17,54;UBERON:0000161,1.95e-14,36;UBERON:0000072,2.33e-14,47;UBERON:0001007,4.00e-14,145;UBERON:0001555,4.00e-14,145;UBERON:0007026,4.00e-14,145;UBERON:0004921,2.62e-12,118;UBERON:0008947,2.84e-12,38;UBERON:0003258,2.84e-12,38;UBERON:0001041,7.99e-12,87;UBERON:0000166,1.65e-11,22;UBERON:0005631,5.66e-11,14;UBERON:0000158,5.66e-11,14;UBERON:0001557,3.19e-10,19;UBERON:0001737,3.93e-10,9;UBERON:0000165,4.73e-09,29;UBERON:0000930,4.73e-09,29;UBERON:0003102,1.62e-08,99;UBERON:0001008,1.74e-08,48;UBERON:0003124,2.40e-08,7;UBERON:0000344,2.69e-08,20;UBERON:0006554,5.84e-08,47;UBERON:0000365,6.88e-08,5;UBERON:0007196,2.30e-07,15;UBERON:0001558,2.30e-07,15;UBERON:0000153,2.36e-07,62;UBERON:0007811,2.36e-07,62;UBERON:0000033,2.50e-07,56;UBERON:0003343,8.31e-07,4;UBERON:0004785,8.31e-07,4;UBERON:0003729,9.23e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.42321085702716,2.09340350391728,8.73765488520689,4.22027165165526,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,30.3409004078046,27.4097386088208,40.3031871081799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0.640456598628376,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.087834785693126,0.196468613246569,9.4716774956061,18.5392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,19.624232346414,0,0,0,0,0,2.24271040056923,0,7.64669400093196,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,63.5828206907247,66.8227995447545,52.1984363607987,0.121973706129595,0,0.116193942869518,1.55491582523056,0.756962552626885,0.72995471815166,0,0,0,0,0,10.8842256036656,8.93498857413939,6.26628677697053,7.72057809126758,9.58669554006587,9.01628352622167,6.20224017536756,8.63374446551523,6.54070166808864,0,0,0,0,0,0,0,0,2.21379189377604,4.97546649865724,36.9858461827068,34.8445435098621,36.0899010957755,74.7188752429334,0,0,0,0,0.821860859650752,0,0,0,7.90204397959275,10.3018339451385,0,0,0,80.6110972286282,96.4217415861454,65.3583198287402,73.4379886163356,63.0675646575297,27.9869355790604,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,1.74306691720059,1.09970290300263,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,1.81876542867756,4.99306318531491,7.25736703991233,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,82.0071463540435,52.8544876492045,0.114814448164607,0,0.262248829918848,2.70719767744447,12.4764846109152,0,1.46139224653261,12.4550922093593,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,4.33289664176565,4.15538004464362,0.223874754722178,0,0,0,0,0,2.7821073144885,0,0,48.2383051916785,61.105663127433,1.6068392984416,0,0.308097234229289,0,0,0,0.145016693914229,0.0852266274161009,0,88.0968598874013,61.1164414221038,91.753540283606,33.8878565866092,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0.274537029736055,0.471249609382746,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,47.4375015736774,30.1636023991104,47.9120333389819,2.44773882019626,24.1083008695889,21.9012918367913,32.3704012081773,102.916083292718,0,0,0,0,0,0,0,0,0.106824071127473,0,17.8879357666153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,10.027268358983,13.3634106374687,28.5659452952286,0,0.140669416410513,0,4.28490072989575,187.479362417658,0.996239941255349,0,0,0.20453736500431,0.123084805461069,0,25.6124800769882,0,0,3.05794557474494,0,0,0,0,0,7.55240507147176,0,2.17499872630438,19.1172993119639,8.64462410995405,2.6002644994473,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,77.1013305860676,4.61701551022782,0,0.922255617552241,6.91133861955245,0,14.0360510282045,10.5337232412142,53.8365123778821,0,0,0,0,0,0,0,0,5.90794580678476,1.79556088975062,0,0,0,0,0,0.296521128680622,0,0,0,0.802577647298789,0,0,19.7621265121411,0.242780379534093,1.18375320854817,0,0.91821828489147,0,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0.569219092059585,0,6.94238953340524,35.5712402614191,31.9507288150077,0.698906672968121,0,0.387025325156341,0.438535902517113,0.328461828212837,16.876088868985,0,2.48578814858586,2.19267079434801,0,0,9.19091498853574,4.40873511383435,0,1.39866726707491,2.88180834308212,0,0,3.31326035372744,0,75.6577851119913,0,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0,0,0,8.18683902045863,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,1.5748172408605,3.86900977278975,0,61.0491131430664,0.236417121897595,0.0524545881349981,0,0,56.6149832092364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.16259529011673,0.427149650270779,0.628817220398664,0,0,0,0,52.3439831371549,0,0,0,0,0,0,0,0.250381861413,4.0138643698305,0,0,0,29.1204350551708,0,0,0,0,0,0,0,0,0,0,0,0,0.604923695052956,0.310874401165561,0,0.318593534327405,0,0.465788870628778,0,0,0,0,0.761610424337591,0.813741466409323,0,2.36303225493475,0,0,0,0,0,0,6.16383457303371,18.0130936754938,0,0.680117776536817,30.5609666107461,3.42631386309055,0,21.3072998541071,7.89422578483346,0.353378291891762,0.771656153083659,0.168942440653073,0,0.345430341731199,3.64631947412859,0,0,0.132864840313363,0,0,6.3900956275967,14.5805365117453,1.59989916683944,0,0,0,0,48.8179481940861,31.1038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,7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| ||
|short_description=p1@GPR87 | |short_description=p1@GPR87 | ||
}} | }} |
Latest revision as of 00:52, 16 September 2015
Short description: | p1@GPR87 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR87_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_023915, uc003eyt.2_5end |
EntrezGene: | GPR87 |
HGNC: | 4538 |
UniProt: | Q9BY21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.54e-44 | 253 |
endo-epithelial cell | 1.07e-25 | 42 |
endodermal cell | 3.53e-18 | 58 |
epithelial cell of alimentary canal | 3.34e-15 | 20 |
respiratory epithelial cell | 1.14e-14 | 13 |
squamous epithelial cell | 7.59e-14 | 63 |
general ecto-epithelial cell | 1.97e-09 | 14 |
epithelial cell of tracheobronchial tree | 2.44e-09 | 9 |
epithelial cell of lower respiratory tract | 2.44e-09 | 9 |
protein secreting cell | 1.14e-08 | 6 |
acinar cell | 4.13e-08 | 5 |
glandular epithelial cell | 1.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.95e-22 | 74 |
endoderm-derived structure | 2.58e-21 | 160 |
endoderm | 2.58e-21 | 160 |
presumptive endoderm | 2.58e-21 | 160 |
respiratory tract | 7.88e-17 | 54 |
orifice | 1.95e-14 | 36 |
segment of respiratory tract | 2.33e-14 | 47 |
digestive system | 4.00e-14 | 145 |
digestive tract | 4.00e-14 | 145 |
primitive gut | 4.00e-14 | 145 |
subdivision of digestive tract | 2.62e-12 | 118 |
respiratory primordium | 2.84e-12 | 38 |
endoderm of foregut | 2.84e-12 | 38 |
foregut | 7.99e-12 | 87 |
oral opening | 1.65e-11 | 22 |
extraembryonic membrane | 5.66e-11 | 14 |
membranous layer | 5.66e-11 | 14 |
upper respiratory tract | 3.19e-10 | 19 |
larynx | 3.93e-10 | 9 |
mouth | 4.73e-09 | 29 |
stomodeum | 4.73e-09 | 29 |
surface structure | 1.62e-08 | 99 |
renal system | 1.74e-08 | 48 |
chorion | 2.40e-08 | 7 |
mucosa | 2.69e-08 | 20 |
urinary system structure | 5.84e-08 | 47 |
urothelium | 6.88e-08 | 5 |
tracheobronchial tree | 2.30e-07 | 15 |
lower respiratory tract | 2.30e-07 | 15 |
anterior region of body | 2.36e-07 | 62 |
craniocervical region | 2.36e-07 | 62 |
head | 2.50e-07 | 56 |
mucosa of oral region | 8.31e-07 | 4 |
respiratory system mucosa | 8.31e-07 | 4 |
mouth mucosa | 9.23e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.17e-19 | 14 |
carcinoma | 1.22e-18 | 106 |
cell type cancer | 3.05e-11 | 143 |