FFCP PHASE1:Hg19::chr15:56395351..56395354,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:56395351..56395354,+ | |||
|coexpression_cluster_id=C3500 | |coexpression_cluster_id=C3500 | ||
|description=CAGE_peak_at_chr15:56395351..56395354,+ | |description=CAGE_peak_at_chr15:56395351..56395354,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002251!2.18e-08!21;CL:0002076!2.38e-08!43;CL:0000223!4.00e-08!59;CL:0000066!7.34e-08!254 | |ontology_enrichment_celltype=CL:0002251!2.18e-08!21;CL:0002076!2.38e-08!43;CL:0000223!4.00e-08!59;CL:0000066!7.34e-08!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!6.55e-19!143;DOID:305!1.83e-18!106;DOID:1749!2.26e-17!14;DOID:14566!2.63e-14!239;DOID:162!3.28e-13!235 | |ontology_enrichment_disease=DOID:0050687!6.55e-19!143;DOID:305!1.83e-18!106;DOID:1749!2.26e-17!14;DOID:14566!2.63e-14!239;DOID:162!3.28e-13!235 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.45e-26;1!DOID:3149;2.45e-26;1!DOID:3111;7.62e-26;1!DOID:6193;7.62e-26;1!DOID:3603;7.62e-26;1!DOID:1749;1.30e-16;14!DOID:3451;6.85e-14;2!DOID:4159;6.85e-14;2!DOID:0060122;6.85e-14;2!DOID:3350;1.21e-13;2 | |ontology_enrichment_disease_v019=DOID:3151;2.45e-26;1!DOID:3149;2.45e-26;1!DOID:3111;7.62e-26;1!DOID:6193;7.62e-26;1!DOID:3603;7.62e-26;1!DOID:1749;1.30e-16;14!DOID:3451;6.85e-14;2!DOID:4159;6.85e-14;2!DOID:0060122;6.85e-14;2!DOID:3350;1.21e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,2.78e-26,1;DOID:3149,2.78e-26,1;DOID:3111,5.93e-26,1;DOID:3603,5.93e-26,1;DOID:6193,9.79e-26,1;DOID:1749,1.14e-16,14;DOID:3451,7.30e-14,2;DOID:4159,7.30e-14,2;DOID:0060122,7.30e-14,2;DOID:3350,1.37e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!4.63e-11!4;UBERON:0004785!4.63e-11!4;UBERON:0000344!9.53e-10!12;UBERON:0003729!7.83e-09!5 | |ontology_enrichment_uberon=UBERON:0003343!4.63e-11!4;UBERON:0004785!4.63e-11!4;UBERON:0000344!9.53e-10!12;UBERON:0003729!7.83e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;1.36e-07;4!UBERON:0003343;1.80e-07;4!UBERON:0004785;1.80e-07;4!UBERON:0003134;6.29e-07;33!UBERON:0000995;8.59e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0000014;1.36e-07;4!UBERON:0003343;1.80e-07;4!UBERON:0004785;1.80e-07;4!UBERON:0003134;6.29e-07;33!UBERON:0000995;8.59e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.40e-07,4;UBERON:0003343,1.80e-07,4;UBERON:0004785,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0.445773537109913,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0.063186579628488,0.901940516486955,0,0,0,0,0,0.569219092059585,1.10939738410511,0,0.489961987071888,0,0,1.20390222730132,0.0967563312890851,0.0730893170861856,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,3.01891218839339,0,0.0524545881349981,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.964570191354574,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,1.47918486351039,0,0,0,0,0.184105950251841,0.419638523158333,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,1.27592034051333,0.707818340086442,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0.894336993477167,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74963271071881,0.705789743431384,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0.320182037633146,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0.445773537109913,0,0.47748896947538,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64905114129346,0,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0,0.782658475728359,0,0,0,0,0.063186579628488,0.901940516486955,0,0,0,0,0,0.569219092059585,1.10939738410511,0,0.489961987071888,0,0,1.20390222730132,0.0967563312890851,0.0730893170861856,0,0,0,0,0.274083849293502,0.19871461170299,0,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,3.01891218839339,0,0.0524545881349981,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.964570191354574,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,1.47918486351039,0,0,0,0,0.184105950251841,0.419638523158333,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,1.27592034051333,0.707818340086442,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0.894336993477167,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74963271071881,0.705789743431384,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0.320182037633146,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr15:56395351..56395354,+ | |short_description=p@chr15:56395351..56395354,+ | ||
}} | }} |
Latest revision as of 02:43, 25 July 2015
Short description: | p@chr15:56395351..56395354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56395351..56395354, + |
Coexpression cluster: | C3500_cervical_malignant_squamous_amniotic_endometrial_ductal_epithelioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.40e-07 | 4 |
mucosa of oral region | 1.80e-07 | 4 |
respiratory system mucosa | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.78e-26 | 1 |
keratoacanthoma | 2.78e-26 | 1 |
cystadenocarcinoma | 5.93e-26 | 1 |
mucinous cystadenocarcinoma | 5.93e-26 | 1 |
epithelioid sarcoma | 9.79e-26 | 1 |
squamous cell carcinoma | 1.14e-16 | 14 |
skin carcinoma | 7.30e-14 | 2 |
skin cancer | 7.30e-14 | 2 |
integumentary system cancer | 7.30e-14 | 2 |
mesenchymal cell neoplasm | 1.37e-13 | 2 |