FFCP PHASE1:Hg19::chr10:75519586..75519599,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:75519586..75519599,+ | |||
|description=CAGE_peak_at_chr10:75519586..75519599,+ | |description=CAGE_peak_at_chr10:75519586..75519599,+ | ||
|id=chr10:75519586..75519599,+ | |id=chr10:75519586..75519599,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.20e-16!18;CL:0000789!7.20e-16!18;CL:0002420!7.20e-16!18;CL:0002419!7.20e-16!18;CL:0000790!7.20e-16!18;CL:0000625!1.69e-13!11;CL:0000084!5.08e-13!25;CL:0000827!5.08e-13!25;CL:0000623!6.01e-11!3;CL:0000825!6.01e-11!3;CL:0000842!2.61e-10!3;CL:0000767!4.03e-10!3;CL:0000838!4.19e-10!52;CL:0000542!7.59e-10!53;CL:0000051!7.59e-10!53;CL:0000224!8.01e-08!4;CL:0000738!1.69e-07!140;CL:0002087!4.47e-07!119 | |ontology_enrichment_celltype=CL:0000791!7.20e-16!18;CL:0000789!7.20e-16!18;CL:0002420!7.20e-16!18;CL:0002419!7.20e-16!18;CL:0000790!7.20e-16!18;CL:0000625!1.69e-13!11;CL:0000084!5.08e-13!25;CL:0000827!5.08e-13!25;CL:0000623!6.01e-11!3;CL:0000825!6.01e-11!3;CL:0000842!2.61e-10!3;CL:0000767!4.03e-10!3;CL:0000838!4.19e-10!52;CL:0000542!7.59e-10!53;CL:0000051!7.59e-10!53;CL:0000224!8.01e-08!4;CL:0000738!1.69e-07!140;CL:0002087!4.47e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.18e-25;3!CL:0000625;2.74e-15;11!CL:0000791;1.36e-09;18!CL:0000789;1.36e-09;18!CL:0002419;1.36e-09;18!CL:0000767;2.32e-07;3!CL:0000226;3.06e-07;3!CL:0000842;3.06e-07;3!CL:0000084;4.60e-07;25 | |ontology_enrichment_celltype_v019=CL:0000623;5.18e-25;3!CL:0000625;2.74e-15;11!CL:0000791;1.36e-09;18!CL:0000789;1.36e-09;18!CL:0002419;1.36e-09;18!CL:0000767;2.32e-07;3!CL:0000226;3.06e-07;3!CL:0000842;3.06e-07;3!CL:0000084;4.60e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.22e-25,3;CL:0000825,6.22e-25,3;CL:0000625,3.02e-15,11;CL:0000791,1.44e-09,18;CL:0000789,1.44e-09,18;CL:0002420,1.44e-09,18;CL:0002419,1.44e-09,18;CL:0000790,1.44e-09,18;CL:0000838,1.06e-08,52;CL:0000542,1.55e-08,53;CL:0000051,1.55e-08,53;CL:0000767,2.19e-07,3;CL:0000226,2.79e-07,3;CL:0000842,2.79e-07,3;CL:0000084,4.79e-07,25;CL:0000827,4.79e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-19;1!CL:0000790;1.36e-09;18 | |ontology_enrichment_development_v019=UBERON:0009143;1.88e-19;1!CL:0000790;1.36e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.95e-20;1!UBERON:0001961;8.95e-20;1!UBERON:0001744;8.95e-20;1!UBERON:0001042;8.95e-20;1!UBERON:0001735;8.95e-20;1!UBERON:0006562;1.43e-10;2!UBERON:0000341;2.07e-10;2!UBERON:0001043;2.32e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002372;8.95e-20;1!UBERON:0001961;8.95e-20;1!UBERON:0001744;8.95e-20;1!UBERON:0001042;8.95e-20;1!UBERON:0001735;8.95e-20;1!UBERON:0006562;1.43e-10;2!UBERON:0000341;2.07e-10;2!UBERON:0001043;2.32e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,8.95e-20,1;UBERON:0001961,8.95e-20,1;UBERON:0001744,8.95e-20,1;UBERON:0001735,8.95e-20,1;UBERON:0000341,1.72e-10,2;UBERON:0001043,2.32e-07,3;UBERON:0009143,2.32e-07,3 | |||
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| ||
|short_description=p@chr10:75519586..75519599,+ | |short_description=p@chr10:75519586..75519599,+ | ||
}} | }} |
Latest revision as of 15:36, 23 July 2015
Short description: | p@chr10:75519586..75519599, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:75519586..75519599, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.22e-25 | 3 |
pro-NK cell | 6.22e-25 | 3 |
CD8-positive, alpha-beta T cell | 3.02e-15 | 11 |
mature alpha-beta T cell | 1.44e-09 | 18 |
alpha-beta T cell | 1.44e-09 | 18 |
immature T cell | 1.44e-09 | 18 |
mature T cell | 1.44e-09 | 18 |
immature alpha-beta T cell | 1.44e-09 | 18 |
lymphoid lineage restricted progenitor cell | 1.06e-08 | 52 |
lymphocyte | 1.55e-08 | 53 |
common lymphoid progenitor | 1.55e-08 | 53 |
basophil | 2.19e-07 | 3 |
single nucleate cell | 2.79e-07 | 3 |
mononuclear cell | 2.79e-07 | 3 |
T cell | 4.79e-07 | 25 |
pro-T cell | 4.79e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
tonsil | 8.95e-20 | 1 |
mucosa-associated lymphoid tissue | 8.95e-20 | 1 |
lymphoid tissue | 8.95e-20 | 1 |
tonsillar ring | 8.95e-20 | 1 |
throat | 1.72e-10 | 2 |
esophagus | 2.32e-07 | 3 |
esophageal region | 2.32e-07 | 3 |