FFCP PHASE1:Hg19::chr20:44034804..44034826,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55861 | |EntrezGene=55861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15881 | |HGNC=15881 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQY9 | |UniProt=Q9BQY9 | ||
|association_with_transcript=0bp_to_ENST00000357275,NM_001197140_5end | |association_with_transcript=0bp_to_ENST00000357275,NM_001197140_5end | ||
|cluster_id=chr20:44034804..44034826,+ | |||
|description=CAGE_peak_5_at_DBNDD2_5end | |description=CAGE_peak_5_at_DBNDD2_5end | ||
|id=chr20:44034804..44034826,+ | |id=chr20:44034804..44034826,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.19e-11!254 | |ontology_enrichment_celltype=CL:0000066!5.19e-11!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.77e-11,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.57e-19!106;DOID:0050687!4.14e-18!143;DOID:299!1.39e-08!25;DOID:162!1.43e-08!235;DOID:14566!1.06e-07!239 | |ontology_enrichment_disease=DOID:305!2.57e-19!106;DOID:0050687!4.14e-18!143;DOID:299!1.39e-08!25;DOID:162!1.43e-08!235;DOID:14566!1.06e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:299;1.92e-10;25!DOID:305;8.21e-07;106 | |ontology_enrichment_disease_v019=DOID:299;1.92e-10;25!DOID:305;8.21e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.80e-18,106;DOID:0050687,1.81e-17,143;DOID:299,1.32e-10,25;DOID:162,1.44e-08,235;DOID:14566,7.72e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.09e-17!115;UBERON:0001049!7.86e-11!57;UBERON:0005068!7.86e-11!57;UBERON:0006241!7.86e-11!57;UBERON:0007135!7.86e-11!57;UBERON:0002346!1.61e-10!90;UBERON:0000064!2.68e-10!219;UBERON:0005743!1.12e-09!86;UBERON:0003075!1.85e-09!86;UBERON:0007284!1.85e-09!86;UBERON:0000073!7.08e-09!94;UBERON:0001016!7.08e-09!94;UBERON:0001017!8.43e-09!82;UBERON:0004921!4.50e-08!129;UBERON:0004185!4.50e-08!129;UBERON:0000062!4.80e-08!511;UBERON:0002616!9.78e-08!59;UBERON:0001007!1.13e-07!155;UBERON:0001555!1.13e-07!155;UBERON:0007026!1.13e-07!155;UBERON:0002020!1.32e-07!34;UBERON:0003528!1.32e-07!34;UBERON:0001893!1.41e-07!34;UBERON:0002791!1.62e-07!33;UBERON:0003080!2.93e-07!42;UBERON:0000481!4.07e-07!347;UBERON:0002780!5.61e-07!41;UBERON:0001890!5.61e-07!41;UBERON:0006240!5.61e-07!41;UBERON:0005409!8.89e-07!35;UBERON:0001869!9.99e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!6.09e-17!115;UBERON:0001049!7.86e-11!57;UBERON:0005068!7.86e-11!57;UBERON:0006241!7.86e-11!57;UBERON:0007135!7.86e-11!57;UBERON:0002346!1.61e-10!90;UBERON:0000064!2.68e-10!219;UBERON:0005743!1.12e-09!86;UBERON:0003075!1.85e-09!86;UBERON:0007284!1.85e-09!86;UBERON:0000073!7.08e-09!94;UBERON:0001016!7.08e-09!94;UBERON:0001017!8.43e-09!82;UBERON:0004921!4.50e-08!129;UBERON:0004185!4.50e-08!129;UBERON:0000062!4.80e-08!511;UBERON:0002616!9.78e-08!59;UBERON:0001007!1.13e-07!155;UBERON:0001555!1.13e-07!155;UBERON:0007026!1.13e-07!155;UBERON:0002020!1.32e-07!34;UBERON:0003528!1.32e-07!34;UBERON:0001893!1.41e-07!34;UBERON:0002791!1.62e-07!33;UBERON:0003080!2.93e-07!42;UBERON:0000481!4.07e-07!347;UBERON:0002780!5.61e-07!41;UBERON:0001890!5.61e-07!41;UBERON:0006240!5.61e-07!41;UBERON:0005409!8.89e-07!35;UBERON:0001869!9.99e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000489;6.64e-08;29!UBERON:0005409;6.11e-07;22!UBERON:0001893;6.77e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0000489;6.64e-08;29!UBERON:0005409;6.11e-07;22!UBERON:0001893;6.77e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.78e-17,114;UBERON:0001049,1.59e-10,56;UBERON:0005068,1.59e-10,56;UBERON:0006241,1.59e-10,56;UBERON:0007135,1.59e-10,56;UBERON:0002346,1.67e-10,86;UBERON:0011216,1.52e-09,223;UBERON:0003075,3.36e-09,82;UBERON:0007284,3.36e-09,82;UBERON:0000073,3.83e-09,53;UBERON:0002616,3.83e-09,53;UBERON:0000489,8.96e-09,31;UBERON:0003103,3.72e-08,68;UBERON:0001017,5.32e-08,81;UBERON:0003528,1.43e-07,34;UBERON:0002020,1.43e-07,34;UBERON:0001893,1.55e-07,34;UBERON:0002791,6.21e-07,32;UBERON:0002780,6.27e-07,41;UBERON:0001890,6.27e-07,41;UBERON:0003080,6.27e-07,41;UBERON:0006240,6.27e-07,41;UBERON:0001016,6.31e-07,89;UBERON:0010371,7.89e-07,104 | |||
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|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,1.22866968250754,3.48900583986214,1.31064823278103,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.492484232307152,0.408001382488506,0.940364164434263,2.86235987131057,0.410623275218653,0.753255837568817,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0,2.75826367343678,1.50602959389125,0.369754010166788,0,0,0.587200878669695,0.553995408531877,0.601633342410425,0.217010870715852,0,0.647787332037959,0.77272670290256,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0.316462387440884,1.05627643155971,0.212604299965044,0.419317291016752,0.336985893439485,0.150176892841506,0,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.31692042387539,0.393419540227666,1.17903228824749,0.616804496998528,0.501559486172034,0.977766799900771,1.89379122293893,1.94826728407911,0.668462741311041,0.883817722424512,0.664601683750863,0.541607727530031,0.25618263945135,0.520237390239513,1.15106533222573,0.276350017785848,1.44901542867526,0.593146252648242,0.802622484269139,1.04535523804977,0.453237370790265,0.766440987203842,0.34362744548263,1.26509846009751,1.27426165729639,2.60433381542567,0.950452044448374,0.602300476311091,1.53583933385302,0,0.236777252044017,2.46338399076314,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0,0.724232594804119,0,0,0,0.221729397462564,0.527008714158756,1.30979075497713,2.18577172975525,3.33705998505986,0.649094787309367,0.696518949197069,0.398873881556595,0.238490624305342,0.571994910780128,0.74291500265913,0.39752481473341,0,0,0.56530794192401,0.838998872419812,1.10047216776027,0.417989933073621,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.732806975721629,0,0,0.872188104285069,0.993943903390637,0.25326102332916,0.264818361626438,0,0,1.68203280042692,0,0.74000264525148,0,0.269421344139376,0.163461903113459,0,0.576175924479999,0.70296429550139,0,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0.204154171254893,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0.505008341862199,0.125118519871964,0,0.877955241761676,0.30648779579902,0.600952235626387,0,0,0.427114777637135,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0.168776332241266,0.389748020644795,0.504867548488229,0.184099797284599,0.80823028409406,0,0.201504196455281,0.67824236924195,1.15956511897978,0.272746120590835,0,2.43947412259191,3.71083351300159,4.06678800043314,2.38420426535352,2.27088765788066,1.82488679537915,0,0,0,0,0,1.18306800039844,0.674338760312407,1.44606617930089,0.882351781859152,1.74303555273925,1.89816495288877,1.07865046528132,0.588664395376038,1.15424147083917,0,0,0,0,0,0,0,0,2.21379189377604,0.343135620597051,1.31700342490351,0,0.502644862058154,0.740707561268237,0.325808305310325,0,0,0.695582429850461,0.352226082707465,0,0,0.761016608938393,3.1608175918371,4.29243081047436,0.984868024349589,0.468008530278475,0.743155811443641,0,0.503946384596579,1.13420077793909,0.447792613514241,0,1.15014803749563,0,0.352193736052904,0,0.720599767084807,0.37872730027914,0.063497894292169,0,0,0,0.411309970813294,0.600686115687835,0,0.224262168690721,0.43596006883328,0,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,1.4377491329495,1.14861935834114,0,0.144781306667579,0,0,1.34502172792233,0.197030760201927,0,0.256686072559497,0.254094624222463,0,1.54657762555539,0.670065061337395,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,2.9115920614313,1.42743191037729,0.473107245101804,1.28855556491985,0.601892199455438,0,3.10419213877515,0,0.184369168541703,0.434418072340414,0.391602314925481,0,0,0.431428401637234,0.213455115606889,0.606255142892519,0,0.30239029332968,0.992431231275107,0,0.841980283299221,0.384417447767103,0,0.160853921143607,5.93672265779964,0,0,0.0821271560138091,0,0.116210378459959,3.50492403815704,0.200506470303285,1.01289087829486,0.574072240823034,0.364182336013434,0,6.31679458070376,1.61732207919271,3.13739907670742,0,1.58327443339314,1.13733384070897,0.170093705276516,0,0,2.98041081298238,2.50844886927427,5.60727800699084,3.3243040357149,2.23874754722178,0,0,1.53870075069834,5.24823433119529,1.62689197332152,0.412164046590889,1.73981983154852,1.89771849817352,1.14853107599234,1.95018073810956,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0,0,0.6069466851333,0.464845549297286,0,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0.18532421910392,0.286249773483982,0,0.316379424718726,0,1.02359116524534,0,0,0,0,0,0,1.01091240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| ||
|short_description=p5@DBNDD2 | |short_description=p5@DBNDD2 | ||
}} | }} |
Latest revision as of 11:27, 16 September 2015
Short description: | p5@DBNDD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DBNDD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357275, NM_001197140_5end |
EntrezGene: | DBNDD2 |
HGNC: | 15881 |
UniProt: | Q9BQY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.77e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.78e-17 | 114 |
neural tube | 1.59e-10 | 56 |
neural rod | 1.59e-10 | 56 |
future spinal cord | 1.59e-10 | 56 |
neural keel | 1.59e-10 | 56 |
neurectoderm | 1.67e-10 | 86 |
organ system subdivision | 1.52e-09 | 223 |
neural plate | 3.36e-09 | 82 |
presumptive neural plate | 3.36e-09 | 82 |
regional part of nervous system | 3.83e-09 | 53 |
regional part of brain | 3.83e-09 | 53 |
cavitated compound organ | 8.96e-09 | 31 |
compound organ | 3.72e-08 | 68 |
central nervous system | 5.32e-08 | 81 |
brain grey matter | 1.43e-07 | 34 |
gray matter | 1.43e-07 | 34 |
telencephalon | 1.55e-07 | 34 |
regional part of telencephalon | 6.21e-07 | 32 |
regional part of forebrain | 6.27e-07 | 41 |
forebrain | 6.27e-07 | 41 |
anterior neural tube | 6.27e-07 | 41 |
future forebrain | 6.27e-07 | 41 |
nervous system | 6.31e-07 | 89 |
ecto-epithelium | 7.89e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.80e-18 | 106 |
cell type cancer | 1.81e-17 | 143 |
adenocarcinoma | 1.32e-10 | 25 |
cancer | 1.44e-08 | 235 |
disease of cellular proliferation | 7.72e-08 | 239 |