FFCP PHASE1:Hg19::chr5:175838453..175838465,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:175838453..175838465,- | |||
|coexpression_cluster_id=C629 | |coexpression_cluster_id=C629 | ||
|description=CAGE_peak_at_chr5:175838453..175838465,- | |description=CAGE_peak_at_chr5:175838453..175838465,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002076!2.38e-09!43;CL:0000240!3.68e-08!6;CL:0000311!3.68e-08!6;CL:0000079!3.68e-08!6;CL:0000237!3.68e-08!6;CL:0000036!3.68e-08!6;CL:0000357!3.68e-08!6;CL:0000114!3.68e-08!6;CL:0000575!1.77e-07!2 | |ontology_enrichment_celltype=CL:0002076!2.38e-09!43;CL:0000240!3.68e-08!6;CL:0000311!3.68e-08!6;CL:0000079!3.68e-08!6;CL:0000237!3.68e-08!6;CL:0000036!3.68e-08!6;CL:0000357!3.68e-08!6;CL:0000114!3.68e-08!6;CL:0000575!1.77e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.95e-15;5!CL:0002623;2.55e-07;3 | |ontology_enrichment_celltype_v019=CL:0002537;1.95e-15;5!CL:0002623;2.55e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.88e-15,5;CL:0002623,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.82e-20;1!UBERON:0008814;2.37e-10;2!UBERON:0010056;2.37e-10;2 | |ontology_enrichment_development_v019=UBERON:0009143;9.82e-20;1!UBERON:0008814;2.37e-10;2!UBERON:0010056;2.37e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!5.08e-11!21;UBERON:0000161!1.45e-10!35;UBERON:0000165!1.52e-09!28;UBERON:0000930!1.52e-09!28;UBERON:0001004!1.33e-08!72;UBERON:0001444!2.50e-08!48;UBERON:0003102!3.02e-08!95 | |ontology_enrichment_uberon=UBERON:0000166!5.08e-11!21;UBERON:0000161!1.45e-10!35;UBERON:0000165!1.52e-09!28;UBERON:0000930!1.52e-09!28;UBERON:0001004!1.33e-08!72;UBERON:0001444!2.50e-08!48;UBERON:0003102!3.02e-08!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;4.58e-25;3!UBERON:0001033;4.58e-25;3!UBERON:0005795;1.30e-19;1!UBERON:0002372;2.47e-19;1!UBERON:0001961;2.47e-19;1!UBERON:0001744;2.47e-19;1!UBERON:0001042;2.47e-19;1!UBERON:0001735;2.47e-19;1!UBERON:0007029;4.69e-19;1!UBERON:0000305;2.62e-11;7!UBERON:0000165;1.13e-10;28!UBERON:0006562;2.37e-10;2!UBERON:0005631;3.44e-08;10!UBERON:0000158;3.44e-08;10!UBERON:0001043;1.87e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001723;4.58e-25;3!UBERON:0001033;4.58e-25;3!UBERON:0005795;1.30e-19;1!UBERON:0002372;2.47e-19;1!UBERON:0001961;2.47e-19;1!UBERON:0001744;2.47e-19;1!UBERON:0001042;2.47e-19;1!UBERON:0001735;2.47e-19;1!UBERON:0007029;4.69e-19;1!UBERON:0000305;2.62e-11;7!UBERON:0000165;1.13e-10;28!UBERON:0006562;2.37e-10;2!UBERON:0005631;3.44e-08;10!UBERON:0000158;3.44e-08;10!UBERON:0001043;1.87e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,5.50e-25,3;UBERON:0001033,5.50e-25,3;UBERON:0010056,5.50e-25,3;UBERON:0002372,2.71e-19,1;UBERON:0001961,2.71e-19,1;UBERON:0001744,2.71e-19,1;UBERON:0001735,2.71e-19,1;UBERON:0007029,4.69e-19,1;UBERON:0001042,7.29e-17,10;UBERON:0009145,7.29e-17,10;UBERON:0006562,2.15e-15,11;UBERON:0000166,1.75e-13,22;UBERON:0000305,2.55e-11,7;UBERON:0000165,2.60e-10,29;UBERON:0000930,2.60e-10,29;UBERON:0004871,5.06e-10,8;UBERON:0001557,3.52e-09,19;UBERON:0000161,2.30e-08,36;UBERON:0001043,1.82e-07,3;UBERON:0009143,1.82e-07,3 | |||
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| ||
|short_description=p@chr5:175838453..175838465,- | |short_description=p@chr5:175838453..175838465,- | ||
}} | }} |
Latest revision as of 13:27, 30 July 2015
Short description: | p@chr5:175838453..175838465, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:175838453..175838465, - |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.88e-15 | 5 |
acinar cell of salivary gland | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 5.50e-25 | 3 |
gustatory system | 5.50e-25 | 3 |
future tongue | 5.50e-25 | 3 |
tonsil | 2.71e-19 | 1 |
mucosa-associated lymphoid tissue | 2.71e-19 | 1 |
lymphoid tissue | 2.71e-19 | 1 |
tonsillar ring | 2.71e-19 | 1 |
surface | 4.69e-19 | 1 |
chordate pharynx | 7.29e-17 | 10 |
pharyngeal region of foregut | 7.29e-17 | 10 |
pharynx | 2.15e-15 | 11 |
oral opening | 1.75e-13 | 22 |
amnion | 2.55e-11 | 7 |
mouth | 2.60e-10 | 29 |
stomodeum | 2.60e-10 | 29 |
somatic layer of lateral plate mesoderm | 5.06e-10 | 8 |
upper respiratory tract | 3.52e-09 | 19 |
orifice | 2.30e-08 | 36 |
esophagus | 1.82e-07 | 3 |
esophageal region | 1.82e-07 | 3 |