FFCP PHASE1:Hg19::chr9:127563885..127563899,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:127563885..127563899,+ | |||
|coexpression_cluster_id=C2018 | |coexpression_cluster_id=C2018 | ||
|description=CAGE_peak_at_chr9:127563885..127563899,+ | |description=CAGE_peak_at_chr9:127563885..127563899,+ | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;2.73e-07;4!CL:0000128;3.78e-07;7!CL:0000126;3.78e-07;7!CL:0000127;3.78e-07;7 | |ontology_enrichment_celltype_v019=CL:0000669;2.73e-07;4!CL:0000128;3.78e-07;7!CL:0000126;3.78e-07;7!CL:0000127;3.78e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000669,2.46e-07,4;CL:0000128,3.84e-07,7;CL:0000126,3.84e-07,7;CL:0000127,3.84e-07,7;CL:0002453,3.84e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.02e-13!347;UBERON:0000468!9.01e-09!659;UBERON:0000475!4.08e-08!365;UBERON:0000922!5.28e-08!612;UBERON:0000064!5.42e-08!219;UBERON:0000062!4.34e-07!511 | |ontology_enrichment_uberon=UBERON:0000481!3.02e-13!347;UBERON:0000468!9.01e-09!659;UBERON:0000475!4.08e-08!365;UBERON:0000922!5.28e-08!612;UBERON:0000064!5.42e-08!219;UBERON:0000062!4.34e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.93e-08;5!UBERON:0002216;4.93e-08;5!UBERON:0011134;4.93e-08;5!UBERON:0002209;4.93e-08;5!UBERON:0002213;4.93e-08;5!UBERON:0007844;4.93e-08;5!UBERON:0011138;4.93e-08;5!UBERON:0001130;4.93e-08;5!UBERON:0001066;4.93e-08;5!UBERON:0001468;4.93e-08;5!UBERON:0006876;1.23e-07;11!UBERON:0000020;3.02e-07;23!UBERON:0001032;8.22e-07;24!UBERON:0004456;8.22e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0011135;4.93e-08;5!UBERON:0002216;4.93e-08;5!UBERON:0011134;4.93e-08;5!UBERON:0002209;4.93e-08;5!UBERON:0002213;4.93e-08;5!UBERON:0007844;4.93e-08;5!UBERON:0011138;4.93e-08;5!UBERON:0001130;4.93e-08;5!UBERON:0001066;4.93e-08;5!UBERON:0001468;4.93e-08;5!UBERON:0006876;1.23e-07;11!UBERON:0000020;3.02e-07;23!UBERON:0001032;8.22e-07;24!UBERON:0004456;8.22e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.84e-08,5;UBERON:0002216,2.84e-08,5;UBERON:0011134,2.84e-08,5;UBERON:0002209,2.84e-08,5;UBERON:0002213,2.84e-08,5;UBERON:0005856,2.84e-08,5;UBERON:0005866,2.84e-08,5;UBERON:0005863,2.84e-08,5;UBERON:0007844,2.84e-08,5;UBERON:0011138,2.84e-08,5;UBERON:0001130,2.84e-08,5;UBERON:0001066,2.84e-08,5;UBERON:0001468,2.84e-08,5;UBERON:0006876,1.30e-07,11;UBERON:0000020,6.44e-07,24;UBERON:0001032,6.44e-07,24;UBERON:0004456,6.44e-07,24;UBERON:0004905,8.19e-07,8;UBERON:0000982,8.19e-07,8;UBERON:0004770,8.19e-07,8 | |||
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| ||
|short_description=p@chr9:127563885..127563899,+ | |short_description=p@chr9:127563885..127563899,+ | ||
}} | }} |
Latest revision as of 22:39, 31 July 2015
Short description: | p@chr9:127563885..127563899, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:127563885..127563899, + |
Coexpression cluster: | C2018_Pericytes_Mesenchymal_large_cervical_skeletal_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 2.46e-07 | 4 |
oligodendrocyte | 3.84e-07 | 7 |
macroglial cell | 3.84e-07 | 7 |
astrocyte | 3.84e-07 | 7 |
oligodendrocyte precursor cell | 3.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.84e-08 | 5 |
symphysis | 2.84e-08 | 5 |
nonsynovial joint | 2.84e-08 | 5 |
fibrous joint | 2.84e-08 | 5 |
cartilaginous joint | 2.84e-08 | 5 |
developing mesenchymal condensation | 2.84e-08 | 5 |
pre-cartilage condensation | 2.84e-08 | 5 |
cartilaginous condensation | 2.84e-08 | 5 |
cartilage element | 2.84e-08 | 5 |
post-cranial axial skeletal system | 2.84e-08 | 5 |
vertebral column | 2.84e-08 | 5 |
intervertebral disk | 2.84e-08 | 5 |
intervertebral joint | 2.84e-08 | 5 |
vasculature of organ | 1.30e-07 | 11 |
sense organ | 6.44e-07 | 24 |
sensory system | 6.44e-07 | 24 |
entire sense organ system | 6.44e-07 | 24 |
articulation | 8.19e-07 | 8 |
skeletal joint | 8.19e-07 | 8 |
articular system | 8.19e-07 | 8 |