FFCP PHASE1:Hg19::chr17:41277479..41277510,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=672 | |EntrezGene=672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1100 | |HGNC=1100 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8H7,P38398,E9PFC7,Q3LRJ6,Q6IN79,Q1RMC1 | |UniProt=F8W8H7,P38398,E9PFC7,Q3LRJ6,Q6IN79,Q1RMC1 | ||
|association_with_transcript=0bp_to_ENST00000352993,ENST00000354071,ENST00000412061,ENST00000471181,NM_007294,NM_007300,uc002icq.2,uc002ict.2,uc010cyz.2,uc010cza.2,uc010whn.1,uc010who.1,uc010wht.1_5end | |association_with_transcript=0bp_to_ENST00000352993,ENST00000354071,ENST00000412061,ENST00000471181,NM_007294,NM_007300,uc002icq.2,uc002ict.2,uc010cyz.2,uc010cza.2,uc010whn.1,uc010who.1,uc010wht.1_5end | ||
|cluster_id=chr17:41277479..41277510,- | |||
|description=CAGE_peak_5_at_BRCA1_5end | |description=CAGE_peak_5_at_BRCA1_5end | ||
|id=chr17:41277479..41277510,- | |id=chr17:41277479..41277510,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.65e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;5.65e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-43!115;UBERON:0001049!4.47e-16!57;UBERON:0005068!4.47e-16!57;UBERON:0006241!4.47e-16!57;UBERON:0007135!4.47e-16!57;UBERON:0003080!3.14e-14!42;UBERON:0002780!7.78e-14!41;UBERON:0001890!7.78e-14!41;UBERON:0006240!7.78e-14!41;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0002616!2.25e-12!59;UBERON:0001017!1.18e-11!82;UBERON:0005743!2.25e-11!86;UBERON:0002020!7.92e-11!34;UBERON:0003528!7.92e-11!34;UBERON:0001893!1.18e-10!34;UBERON:0003075!1.70e-10!86;UBERON:0007284!1.70e-10!86;UBERON:0000073!2.11e-10!94;UBERON:0001016!2.11e-10!94;UBERON:0000153!2.14e-10!129;UBERON:0007811!2.14e-10!129;UBERON:0002791!2.71e-10!33;UBERON:0000033!7.03e-10!123;UBERON:0002346!9.94e-10!90;UBERON:0001869!1.60e-09!32;UBERON:0003056!1.77e-08!61;UBERON:0001950!1.39e-07!20;UBERON:0004121!1.70e-07!169;UBERON:0002619!3.08e-07!22;UBERON:0000924!3.97e-07!173;UBERON:0006601!3.97e-07!173;UBERON:0002308!7.58e-07!9;UBERON:0000125!7.58e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.17e-43!115;UBERON:0001049!4.47e-16!57;UBERON:0005068!4.47e-16!57;UBERON:0006241!4.47e-16!57;UBERON:0007135!4.47e-16!57;UBERON:0003080!3.14e-14!42;UBERON:0002780!7.78e-14!41;UBERON:0001890!7.78e-14!41;UBERON:0006240!7.78e-14!41;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0002616!2.25e-12!59;UBERON:0001017!1.18e-11!82;UBERON:0005743!2.25e-11!86;UBERON:0002020!7.92e-11!34;UBERON:0003528!7.92e-11!34;UBERON:0001893!1.18e-10!34;UBERON:0003075!1.70e-10!86;UBERON:0007284!1.70e-10!86;UBERON:0000073!2.11e-10!94;UBERON:0001016!2.11e-10!94;UBERON:0000153!2.14e-10!129;UBERON:0007811!2.14e-10!129;UBERON:0002791!2.71e-10!33;UBERON:0000033!7.03e-10!123;UBERON:0002346!9.94e-10!90;UBERON:0001869!1.60e-09!32;UBERON:0003056!1.77e-08!61;UBERON:0001950!1.39e-07!20;UBERON:0004121!1.70e-07!169;UBERON:0002619!3.08e-07!22;UBERON:0000924!3.97e-07!173;UBERON:0006601!3.97e-07!173;UBERON:0002308!7.58e-07!9;UBERON:0000125!7.58e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.60e-17;41!UBERON:0001890;6.60e-17;41!UBERON:0007023;3.28e-16;114!UBERON:0001893;7.45e-15;34!UBERON:0003528;1.31e-14;34!UBERON:0002020;1.31e-14;34!UBERON:0000073;1.40e-14;53!UBERON:0002616;1.40e-14;53!UBERON:0002791;2.40e-14;32!UBERON:0001869;5.19e-14;32!UBERON:0000125;3.37e-12;9!UBERON:0002308;3.37e-12;9!UBERON:0002619;8.14e-11;22!UBERON:0001950;1.66e-10;20!UBERON:0009663;7.09e-10;7!UBERON:0002420;1.13e-09;9!UBERON:0007245;1.13e-09;9!UBERON:0010009;1.13e-09;9!UBERON:0010011;1.13e-09;9!UBERON:0000454;1.13e-09;9!UBERON:0001017;2.37e-09;75!UBERON:0000955;3.94e-09;68!UBERON:0000956;5.06e-09;25!UBERON:0000203;5.06e-09;25!UBERON:0002298;3.68e-08;6!UBERON:0000200;1.98e-07;6!UBERON:0001016;4.07e-07;83!UBERON:0001894;5.83e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002780;6.60e-17;41!UBERON:0001890;6.60e-17;41!UBERON:0007023;3.28e-16;114!UBERON:0001893;7.45e-15;34!UBERON:0003528;1.31e-14;34!UBERON:0002020;1.31e-14;34!UBERON:0000073;1.40e-14;53!UBERON:0002616;1.40e-14;53!UBERON:0002791;2.40e-14;32!UBERON:0001869;5.19e-14;32!UBERON:0000125;3.37e-12;9!UBERON:0002308;3.37e-12;9!UBERON:0002619;8.14e-11;22!UBERON:0001950;1.66e-10;20!UBERON:0009663;7.09e-10;7!UBERON:0002420;1.13e-09;9!UBERON:0007245;1.13e-09;9!UBERON:0010009;1.13e-09;9!UBERON:0010011;1.13e-09;9!UBERON:0000454;1.13e-09;9!UBERON:0001017;2.37e-09;75!UBERON:0000955;3.94e-09;68!UBERON:0000956;5.06e-09;25!UBERON:0000203;5.06e-09;25!UBERON:0002298;3.68e-08;6!UBERON:0000200;1.98e-07;6!UBERON:0001016;4.07e-07;83!UBERON:0001894;5.83e-07;7 | ||
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| ||
|short_description=p5@BRCA1 | |short_description=p5@BRCA1 | ||
}} | }} |
Latest revision as of 17:29, 24 September 2015
Short description: | p5@BRCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BRCA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000352993, ENST00000354071, ENST00000412061, ENST00000471181, NM_007294, NM_007300, uc002icq.2, uc002ict.2, uc010cyz.2, uc010cza.2, uc010whn.1, uc010who.1, uc010wht.1_5end |
EntrezGene: | BRCA1 |
HGNC: | 1100 |
UniProt: | F8W8H7P38398E9PFC7Q3LRJ6Q6IN79Q1RMC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data