FFCP PHASE1:Hg19::chr3:46448921..46448933,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9034 | |EntrezGene=9034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1612 | |HGNC=1612 | ||
|TSSclassifier=strong | |||
|UniProt=O00421 | |UniProt=O00421 | ||
|association_with_transcript=-115bp_to_ENST00000357392,NM_001130910,uc010hjg.2_5end | |association_with_transcript=-115bp_to_ENST00000357392,NM_001130910,uc010hjg.2_5end | ||
|cluster_id=chr3:46448921..46448933,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_4_at_CCRL2_5end | |description=CAGE_peak_4_at_CCRL2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000839!1.68e-49!70;CL:0002057!9.11e-48!42;CL:0002009!2.95e-47!65;CL:0002194!1.12e-46!63;CL:0000576!1.12e-46!63;CL:0000040!1.12e-46!63;CL:0000559!1.12e-46!63;CL:0000557!1.63e-46!71;CL:0000860!2.41e-46!45;CL:0000766!1.91e-44!76;CL:0000763!1.10e-42!112;CL:0000049!1.10e-42!112;CL:0000037!2.95e-26!172;CL:0000566!2.95e-26!172;CL:0000988!5.81e-26!182;CL:0002032!8.86e-26!165;CL:0000837!8.86e-26!165;CL:0002031!1.58e-25!124;CL:0000738!2.69e-24!140;CL:0002087!2.79e-23!119;CL:0000134!1.78e-08!358;CL:0002320!1.82e-08!365;CL:0000115!4.29e-07!35 | |ontology_enrichment_celltype=CL:0000839!1.68e-49!70;CL:0002057!9.11e-48!42;CL:0002009!2.95e-47!65;CL:0002194!1.12e-46!63;CL:0000576!1.12e-46!63;CL:0000040!1.12e-46!63;CL:0000559!1.12e-46!63;CL:0000557!1.63e-46!71;CL:0000860!2.41e-46!45;CL:0000766!1.91e-44!76;CL:0000763!1.10e-42!112;CL:0000049!1.10e-42!112;CL:0000037!2.95e-26!172;CL:0000566!2.95e-26!172;CL:0000988!5.81e-26!182;CL:0002032!8.86e-26!165;CL:0000837!8.86e-26!165;CL:0002031!1.58e-25!124;CL:0000738!2.69e-24!140;CL:0002087!2.79e-23!119;CL:0000134!1.78e-08!358;CL:0002320!1.82e-08!365;CL:0000115!4.29e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-128;33!CL:0002057;2.04e-128;33!CL:0000473;3.89e-102;39!CL:0000234;3.89e-102;39!CL:0000576;4.50e-67;48!CL:0000766;1.05e-41;69!CL:0000763;2.85e-22;100!CL:0002087;7.73e-17;104!CL:0000738;9.56e-13;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.04e-128;33!CL:0002057;2.04e-128;33!CL:0000473;3.89e-102;39!CL:0000234;3.89e-102;39!CL:0000576;4.50e-67;48!CL:0000766;1.05e-41;69!CL:0000763;2.85e-22;100!CL:0002087;7.73e-17;104!CL:0000738;9.56e-13;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.81e-117,42;CL:0002057,4.81e-117,42;CL:0000473,3.10e-115,48;CL:0000234,3.10e-115,48;CL:0002194,1.32e-96,59;CL:0000576,1.32e-96,59;CL:0000040,1.32e-96,59;CL:0000559,1.32e-96,59;CL:0002009,2.75e-93,61;CL:0000839,3.24e-91,66;CL:0000557,8.83e-90,67;CL:0000766,3.40e-83,72;CL:0000763,6.04e-57,108;CL:0000049,6.04e-57,108;CL:0002031,1.23e-47,120;CL:0002087,6.89e-47,115;CL:0000738,2.60e-41,136;CL:0002032,3.61e-36,161;CL:0000837,3.61e-36,161;CL:0000037,2.14e-34,168;CL:0000988,2.54e-32,177;CL:0000134,8.07e-13,354;CL:0002320,1.95e-12,361;CL:0000219,4.32e-11,386;CL:0000048,2.64e-10,427;CL:0000723,4.59e-10,433;CL:0000034,9.38e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.94e-86;42!CL:0000049;1.11e-18;108 | |ontology_enrichment_development_v019=CL:0002057;5.94e-86;42!CL:0000049;1.11e-18;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.79e-44!80;UBERON:0001474!1.04e-39!86;UBERON:0002390!1.92e-39!102;UBERON:0003061!1.92e-39!102;UBERON:0002193!7.54e-38!112;UBERON:0002405!5.74e-35!115;UBERON:0004765!1.16e-31!101;UBERON:0001434!1.16e-31!101;UBERON:0003081!3.83e-22!216;UBERON:0002204!2.96e-16!167;UBERON:0002384!2.81e-08!375;UBERON:0000926!8.91e-08!448;UBERON:0004120!8.91e-08!448;UBERON:0006603!8.91e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!8.79e-44!80;UBERON:0001474!1.04e-39!86;UBERON:0002390!1.92e-39!102;UBERON:0003061!1.92e-39!102;UBERON:0002193!7.54e-38!112;UBERON:0002405!5.74e-35!115;UBERON:0004765!1.16e-31!101;UBERON:0001434!1.16e-31!101;UBERON:0003081!3.83e-22!216;UBERON:0002204!2.96e-16!167;UBERON:0002384!2.81e-08!375;UBERON:0000926!8.91e-08!448;UBERON:0004120!8.91e-08!448;UBERON:0006603!8.91e-08!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.53e-78,76;UBERON:0001474,2.11e-72,82;UBERON:0004765,1.79e-65,90;UBERON:0002405,3.53e-63,93;UBERON:0002390,1.16e-59,98;UBERON:0003061,1.16e-59,98;UBERON:0001434,2.36e-58,100;UBERON:0002193,1.35e-53,108;UBERON:0002204,1.26e-34,167;UBERON:0003081,3.54e-29,203;UBERON:0000926,1.99e-16,315;UBERON:0004120,1.99e-16,315;UBERON:0006603,1.99e-16,315;UBERON:0002384,6.46e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.434021741431704,1.11957737119962,0,0.515151135268373,2.4717700592526,2.64513160582167,1.4555043671269,22.3131875429457,32.4822631537242,43.6685982962096,48.9077066947656,31.5077669030794,55.3368417939289,143.069457505697,110.377880892834,138.135016326229,10.1650863353007,22.3783043047434,18.4273257244969,146.002016660921,172.017958512786,194.997823368708,2.96866170168044,8.17800996248691,4.26224750532694,103.314488951776,98.1576438715672,80.3440701204292,17.587406567972,25.5526630025899,36.7049147551647,81.1235333528714,178.982931089956,145.889160610248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0.596287222100115,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0.71153252537342,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,1.18904929830983,0,0,0,0,0,0,5.41929561685538,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72394293573612,0,0,0,0,0,0,0,0.704815022316672,0.533937062838473,0,0,0,0,0,0,0,0.7520696820681,0.612691153526923,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.709036767709349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0.434021741431704,1.11957737119962,0,0.515151135268373,2.4717700592526,2.64513160582167,1.4555043671269,22.3131875429457,32.4822631537242,43.6685982962096,48.9077066947656,31.5077669030794,55.3368417939289,143.069457505697,110.377880892834,138.135016326229,10.1650863353007,22.3783043047434,18.4273257244969,146.002016660921,172.017958512786,194.997823368708,2.96866170168044,8.17800996248691,4.26224750532694,103.314488951776,98.1576438715672,80.3440701204292,17.587406567972,25.5526630025899,36.7049147551647,81.1235333528714,178.982931089956,145.889160610248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0.596287222100115,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0.71153252537342,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.702012795417713,1.18904929830983,0,0,0,0,0,0,5.41929561685538,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0.33307196799782,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0,0,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72394293573612,0,0,0,0,0,0,0,0.704815022316672,0.533937062838473,0,0,0,0,0,0,0,0.7520696820681,0.612691153526923,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.966695013382396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.709036767709349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p4@CCRL2 | |short_description=p4@CCRL2 | ||
}} | }} |
Latest revision as of 11:04, 18 September 2015
Short description: | p4@CCRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCRL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -115bp_to_ENST00000357392, NM_001130910, uc010hjg.2_5end |
EntrezGene: | CCRL2 |
HGNC: | 1612 |
UniProt: | O00421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.81e-117 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.81e-117 | 42 |
defensive cell | 3.10e-115 | 48 |
phagocyte | 3.10e-115 | 48 |
monopoietic cell | 1.32e-96 | 59 |
monocyte | 1.32e-96 | 59 |
monoblast | 1.32e-96 | 59 |
promonocyte | 1.32e-96 | 59 |
macrophage dendritic cell progenitor | 2.75e-93 | 61 |
myeloid lineage restricted progenitor cell | 3.24e-91 | 66 |
granulocyte monocyte progenitor cell | 8.83e-90 | 67 |
myeloid leukocyte | 3.40e-83 | 72 |
myeloid cell | 6.04e-57 | 108 |
common myeloid progenitor | 6.04e-57 | 108 |
hematopoietic lineage restricted progenitor cell | 1.23e-47 | 120 |
nongranular leukocyte | 6.89e-47 | 115 |
leukocyte | 2.60e-41 | 136 |
hematopoietic oligopotent progenitor cell | 3.61e-36 | 161 |
hematopoietic multipotent progenitor cell | 3.61e-36 | 161 |
hematopoietic stem cell | 2.14e-34 | 168 |
hematopoietic cell | 2.54e-32 | 177 |
mesenchymal cell | 8.07e-13 | 354 |
connective tissue cell | 1.95e-12 | 361 |
motile cell | 4.32e-11 | 386 |
multi fate stem cell | 2.64e-10 | 427 |
somatic stem cell | 4.59e-10 | 433 |
stem cell | 9.38e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.53e-78 | 76 |
bone element | 2.11e-72 | 82 |
skeletal element | 1.79e-65 | 90 |
immune system | 3.53e-63 | 93 |
hematopoietic system | 1.16e-59 | 98 |
blood island | 1.16e-59 | 98 |
skeletal system | 2.36e-58 | 100 |
hemolymphoid system | 1.35e-53 | 108 |
musculoskeletal system | 1.26e-34 | 167 |
lateral plate mesoderm | 3.54e-29 | 203 |
mesoderm | 1.99e-16 | 315 |
mesoderm-derived structure | 1.99e-16 | 315 |
presumptive mesoderm | 1.99e-16 | 315 |
connective tissue | 6.46e-12 | 371 |