FFCP PHASE1:Hg19::chr2:165860476..165860511,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:165860476..165860511,+ | |||
|coexpression_cluster_id=C542 | |coexpression_cluster_id=C542 | ||
|description=CAGE_peak_at_chr2:165860476..165860511,+ | |description=CAGE_peak_at_chr2:165860476..165860511,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000313!8.49e-07!1 | |ontology_enrichment_celltype=CL:0000313!8.49e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.07e-09;2 | |ontology_enrichment_celltype_v019=CL:0002253;1.07e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.03e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.56e-22;3!UBERON:0006601;1.01e-07;82 | |ontology_enrichment_development_v019=UBERON:0003056;1.56e-22;3!UBERON:0006601;1.01e-07;82 | ||
|ontology_enrichment_disease=DOID:2152!8.49e-07!1 | |ontology_enrichment_disease=DOID:2152!8.49e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4074;1.07e-09;2!DOID:4905;1.07e-09;2!DOID:3498;1.07e-09;2 | |ontology_enrichment_disease_v019=DOID:4074;1.07e-09;2!DOID:4905;1.07e-09;2!DOID:3498;1.07e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4074,1.12e-09,2;DOID:4905,1.12e-09,2;DOID:3498,1.12e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003296!7.80e-24!4;UBERON:0010133!7.80e-24!4;UBERON:0001894!1.69e-20!7;UBERON:0006222!1.69e-20!7;UBERON:0001905!8.36e-13!2;UBERON:0000007!8.36e-13!2;UBERON:0002757!8.36e-13!2;UBERON:0010134!8.36e-13!2;UBERON:0002784!8.36e-13!2;UBERON:0005408!8.36e-13!2;UBERON:0001899!8.36e-13!2;UBERON:0002346!3.67e-09!90;UBERON:0007023!5.00e-09!115;UBERON:0003056!7.50e-09!61;UBERON:0001896!3.25e-08!3;UBERON:0005290!3.25e-08!3;UBERON:0010096!3.25e-08!3;UBERON:0003075!3.35e-08!86;UBERON:0007284!3.35e-08!86;UBERON:0005383!3.63e-08!3;UBERON:0005382!3.63e-08!3;UBERON:0001049!8.02e-08!57;UBERON:0005068!8.02e-08!57;UBERON:0006241!8.02e-08!57;UBERON:0007135!8.02e-08!57;UBERON:0002616!1.67e-07!59;UBERON:0000955!1.89e-07!69;UBERON:0006238!1.89e-07!69;UBERON:0002780!2.29e-07!41;UBERON:0001890!2.29e-07!41;UBERON:0006240!2.29e-07!41;UBERON:0003080!3.62e-07!42;UBERON:0002079!4.78e-07!1;UBERON:0002171!6.76e-07!1;UBERON:0006518!6.76e-07!1;UBERON:0008949!6.76e-07!1;UBERON:0000101!6.76e-07!1;UBERON:0002167!6.76e-07!1;UBERON:0005743!8.02e-07!86;UBERON:0004911!8.49e-07!1;UBERON:0001874!8.98e-07!1 | |ontology_enrichment_uberon=UBERON:0003296!7.80e-24!4;UBERON:0010133!7.80e-24!4;UBERON:0001894!1.69e-20!7;UBERON:0006222!1.69e-20!7;UBERON:0001905!8.36e-13!2;UBERON:0000007!8.36e-13!2;UBERON:0002757!8.36e-13!2;UBERON:0010134!8.36e-13!2;UBERON:0002784!8.36e-13!2;UBERON:0005408!8.36e-13!2;UBERON:0001899!8.36e-13!2;UBERON:0002346!3.67e-09!90;UBERON:0007023!5.00e-09!115;UBERON:0003056!7.50e-09!61;UBERON:0001896!3.25e-08!3;UBERON:0005290!3.25e-08!3;UBERON:0010096!3.25e-08!3;UBERON:0003075!3.35e-08!86;UBERON:0007284!3.35e-08!86;UBERON:0005383!3.63e-08!3;UBERON:0005382!3.63e-08!3;UBERON:0001049!8.02e-08!57;UBERON:0005068!8.02e-08!57;UBERON:0006241!8.02e-08!57;UBERON:0007135!8.02e-08!57;UBERON:0002616!1.67e-07!59;UBERON:0000955!1.89e-07!69;UBERON:0006238!1.89e-07!69;UBERON:0002780!2.29e-07!41;UBERON:0001890!2.29e-07!41;UBERON:0006240!2.29e-07!41;UBERON:0003080!3.62e-07!42;UBERON:0002079!4.78e-07!1;UBERON:0002171!6.76e-07!1;UBERON:0006518!6.76e-07!1;UBERON:0008949!6.76e-07!1;UBERON:0000101!6.76e-07!1;UBERON:0002167!6.76e-07!1;UBERON:0005743!8.02e-07!86;UBERON:0004911!8.49e-07!1;UBERON:0001874!8.98e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.01e-65;4!UBERON:0010133;1.01e-65;4!UBERON:0001894;8.01e-38;7!UBERON:0001905;8.39e-34;2!UBERON:0000007;8.39e-34;2!UBERON:0002757;8.39e-34;2!UBERON:0010134;8.39e-34;2!UBERON:0005408;8.39e-34;2!UBERON:0001899;8.39e-34;2!UBERON:0002784;1.86e-17;4!UBERON:0000966;6.11e-14;5!UBERON:0005388;6.11e-14;5!UBERON:0001802;6.11e-14;5!UBERON:0000949;2.18e-08;43!UBERON:0002368;2.52e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0003296;1.01e-65;4!UBERON:0010133;1.01e-65;4!UBERON:0001894;8.01e-38;7!UBERON:0001905;8.39e-34;2!UBERON:0000007;8.39e-34;2!UBERON:0002757;8.39e-34;2!UBERON:0010134;8.39e-34;2!UBERON:0005408;8.39e-34;2!UBERON:0001899;8.39e-34;2!UBERON:0002784;1.86e-17;4!UBERON:0000966;6.11e-14;5!UBERON:0005388;6.11e-14;5!UBERON:0001802;6.11e-14;5!UBERON:0000949;2.18e-08;43!UBERON:0002368;2.52e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.01e-65,4;UBERON:0010133,1.01e-65,4;UBERON:0001894,8.01e-38,7;UBERON:0006222,8.01e-38,7;UBERON:0001905,8.39e-34,2;UBERON:0000007,8.39e-34,2;UBERON:0002757,8.39e-34,2;UBERON:0010134,8.39e-34,2;UBERON:0005408,8.39e-34,2;UBERON:0001899,8.39e-34,2;UBERON:0002784,1.86e-17,4;UBERON:0000966,8.82e-12,6;UBERON:0005388,8.82e-12,6;UBERON:0001802,8.82e-12,6;UBERON:0003056,2.45e-09,61;UBERON:0000949,3.10e-09,45;UBERON:0002346,7.01e-09,86;UBERON:0002368,7.45e-08,35;UBERON:0003075,6.52e-07,82;UBERON:0007284,6.52e-07,82 | |||
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|short_description=p@chr2:165860476..165860511,+ | |short_description=p@chr2:165860476..165860511,+ | ||
}} | }} |
Latest revision as of 02:04, 29 July 2015
Short description: | p@chr2:165860476..165860511, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:165860476..165860511, + |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.01e-65 | 4 |
neuroendocrine gland | 1.01e-65 | 4 |
diencephalon | 8.01e-38 | 7 |
future diencephalon | 8.01e-38 | 7 |
pineal body | 8.39e-34 | 2 |
pituitary gland | 8.39e-34 | 2 |
regional part of epithalamus | 8.39e-34 | 2 |
secretory circumventricular organ | 8.39e-34 | 2 |
circumventricular organ | 8.39e-34 | 2 |
epithalamus | 8.39e-34 | 2 |
regional part of diencephalon | 1.86e-17 | 4 |
retina | 8.82e-12 | 6 |
photoreceptor array | 8.82e-12 | 6 |
posterior segment of eyeball | 8.82e-12 | 6 |
pre-chordal neural plate | 2.45e-09 | 61 |
endocrine system | 3.10e-09 | 45 |
neurectoderm | 7.01e-09 | 86 |
endocrine gland | 7.45e-08 | 35 |
neural plate | 6.52e-07 | 82 |
presumptive neural plate | 6.52e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.12e-09 | 2 |
pancreatic carcinoma | 1.12e-09 | 2 |
pancreatic ductal adenocarcinoma | 1.12e-09 | 2 |