FFCP PHASE1:Hg19::chr3:123603137..123603203,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |EntrezGene=4638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7590 | |HGNC=7590 | ||
|TSSclassifier=strong | |||
|UniProt=Q15746,F8WBL7,Q6P2N0 | |UniProt=Q15746,F8WBL7,Q6P2N0 | ||
|association_with_transcript=0bp_to_ENST00000346322,ENST00000359169,ENST00000360304,ENST00000360772,ENST00000464489,NM_053025,NM_053026,NM_053027,NM_053028,uc003ego.2,uc003egp.2,uc003egq.2,uc003egr.2,uc003egs.2_5end | |association_with_transcript=0bp_to_ENST00000346322,ENST00000359169,ENST00000360304,ENST00000360772,ENST00000464489,NM_053025,NM_053026,NM_053027,NM_053028,uc003ego.2,uc003egp.2,uc003egq.2,uc003egr.2,uc003egs.2_5end | ||
|cluster_id=chr3:123603137..123603203,- | |||
|description=CAGE_peak_2_at_MYLK_5end | |description=CAGE_peak_2_at_MYLK_5end | ||
|id=chr3:123603137..123603203,- | |id=chr3:123603137..123603203,- | ||
|ontology_enrichment_celltype=CL:0000055!1.89e-27!180;CL:0000057!2.43e-16!75;CL:0002620!1.89e-08!23;CL:0002321!2.52e-08!248;CL:0000220!3.33e-08!246;CL:0000077!7.88e-08!19;CL:0000680!1.51e-07!57;CL:0000056!1.51e-07!57;CL:0000355!1.51e-07!57;CL:0000183!2.44e-07!59;CL:0000222!3.27e-07!119;CL:0000192!4.27e-07!42;CL:0000514!4.27e-07!42;CL:0000187!6.42e-07!54 | |ontology_enrichment_celltype=CL:0000055!1.89e-27!180;CL:0000057!2.43e-16!75;CL:0002620!1.89e-08!23;CL:0002321!2.52e-08!248;CL:0000220!3.33e-08!246;CL:0000077!7.88e-08!19;CL:0000680!1.51e-07!57;CL:0000056!1.51e-07!57;CL:0000355!1.51e-07!57;CL:0000183!2.44e-07!59;CL:0000222!3.27e-07!119;CL:0000192!4.27e-07!42;CL:0000514!4.27e-07!42;CL:0000187!6.42e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.52e-08;23!CL:0000077;4.85e-08;19!CL:0000057;4.15e-07;73!CL:0002320;7.44e-07;188 | |ontology_enrichment_celltype_v019=CL:0002620;1.52e-08;23!CL:0000077;4.85e-08;19!CL:0000057;4.15e-07;73!CL:0002320;7.44e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.14e-16,76;CL:0002620,1.15e-08,23;CL:0000680,4.61e-08,58;CL:0000056,4.61e-08,58;CL:0000355,4.61e-08,58;CL:0000077,5.01e-08,19;CL:0000192,1.84e-07,43;CL:0000514,1.84e-07,43;CL:0000187,2.08e-07,55;CL:0002321,2.84e-07,250;CL:0000222,3.20e-07,121 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.45e-22!365;UBERON:0005256!3.33e-15!143;UBERON:0002100!1.48e-13!216;UBERON:0000481!2.61e-12!347;UBERON:0000914!3.24e-10!83;UBERON:0002329!3.24e-10!83;UBERON:0003077!3.24e-10!83;UBERON:0003059!3.24e-10!83;UBERON:0007282!3.24e-10!83;UBERON:0009618!3.24e-10!83;UBERON:0007285!3.24e-10!83;UBERON:0000119!7.53e-10!312;UBERON:0000483!7.71e-10!309;UBERON:0000468!1.46e-08!659;UBERON:0000064!1.88e-08!219;UBERON:0003102!2.62e-08!95;UBERON:0003104!4.20e-08!238;UBERON:0009142!4.20e-08!238;UBERON:0004290!4.57e-08!70;UBERON:0000486!3.32e-07!82;UBERON:0001134!7.40e-07!61;UBERON:0002036!7.40e-07!61;UBERON:0003082!7.40e-07!61;UBERON:0000467!8.84e-07!625 | |ontology_enrichment_uberon=UBERON:0000475!1.45e-22!365;UBERON:0005256!3.33e-15!143;UBERON:0002100!1.48e-13!216;UBERON:0000481!2.61e-12!347;UBERON:0000914!3.24e-10!83;UBERON:0002329!3.24e-10!83;UBERON:0003077!3.24e-10!83;UBERON:0003059!3.24e-10!83;UBERON:0007282!3.24e-10!83;UBERON:0009618!3.24e-10!83;UBERON:0007285!3.24e-10!83;UBERON:0000119!7.53e-10!312;UBERON:0000483!7.71e-10!309;UBERON:0000468!1.46e-08!659;UBERON:0000064!1.88e-08!219;UBERON:0003102!2.62e-08!95;UBERON:0003104!4.20e-08!238;UBERON:0009142!4.20e-08!238;UBERON:0004290!4.57e-08!70;UBERON:0000486!3.32e-07!82;UBERON:0001134!7.40e-07!61;UBERON:0002036!7.40e-07!61;UBERON:0003082!7.40e-07!61;UBERON:0000467!8.84e-07!625 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,2.17e-12,160;UBERON:0009142,2.17e-12,160;UBERON:0005256,5.45e-10,122;UBERON:0002100,1.11e-09,199;UBERON:0007503,4.03e-09,78;UBERON:0007524,1.22e-08,73;UBERON:0002329,1.64e-08,71;UBERON:0003059,1.64e-08,71;UBERON:0007282,1.64e-08,71;UBERON:0004290,1.64e-08,71;UBERON:0009618,1.64e-08,71;UBERON:0000119,1.66e-08,309;UBERON:0000483,1.70e-08,306;UBERON:0003077,2.08e-08,72;UBERON:0007285,2.08e-08,72;UBERON:0003102,9.49e-08,99;UBERON:0000486,1.45e-07,83;UBERON:0004923,1.69e-07,66;UBERON:0001134,2.94e-07,62;UBERON:0002036,2.94e-07,62;UBERON:0003082,2.94e-07,62;UBERON:0002385,9.96e-07,64;UBERON:0001015,9.96e-07,64;UBERON:0000383,9.96e-07,64 | |||
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| ||
|short_description=p2@MYLK | |short_description=p2@MYLK | ||
}} | }} |
Latest revision as of 01:58, 20 September 2015
Short description: | p2@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYLK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000346322, ENST00000359169, ENST00000360304, ENST00000360772, ENST00000464489, NM_053025, NM_053026, NM_053027, NM_053028, uc003ego.2, uc003egp.2, uc003egq.2, uc003egr.2, uc003egs.2_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | Q15746F8WBL7Q6P2N0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.14e-16 | 76 |
skin fibroblast | 1.15e-08 | 23 |
muscle precursor cell | 4.61e-08 | 58 |
myoblast | 4.61e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.61e-08 | 58 |
mesothelial cell | 5.01e-08 | 19 |
smooth muscle cell | 1.84e-07 | 43 |
smooth muscle myoblast | 1.84e-07 | 43 |
muscle cell | 2.08e-07 | 55 |
embryonic cell | 2.84e-07 | 250 |
mesodermal cell | 3.20e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 2.17e-12 | 160 |
entire embryonic mesenchyme | 2.17e-12 | 160 |
trunk mesenchyme | 5.45e-10 | 122 |
trunk | 1.11e-09 | 199 |
epithelial vesicle | 4.03e-09 | 78 |
dense mesenchyme tissue | 1.22e-08 | 73 |
somite | 1.64e-08 | 71 |
presomitic mesoderm | 1.64e-08 | 71 |
presumptive segmental plate | 1.64e-08 | 71 |
dermomyotome | 1.64e-08 | 71 |
trunk paraxial mesoderm | 1.64e-08 | 71 |
cell layer | 1.66e-08 | 309 |
epithelium | 1.70e-08 | 306 |
paraxial mesoderm | 2.08e-08 | 72 |
presumptive paraxial mesoderm | 2.08e-08 | 72 |
surface structure | 9.49e-08 | 99 |
multilaminar epithelium | 1.45e-07 | 83 |
organ component layer | 1.69e-07 | 66 |
skeletal muscle tissue | 2.94e-07 | 62 |
striated muscle tissue | 2.94e-07 | 62 |
myotome | 2.94e-07 | 62 |
muscle tissue | 9.96e-07 | 64 |
musculature | 9.96e-07 | 64 |
musculature of body | 9.96e-07 | 64 |