FFCP PHASE1:Hg19::chrX:74869077..74869082,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:74869077..74869082,- | |||
|coexpression_cluster_id=C4281 | |coexpression_cluster_id=C4281 | ||
|description=CAGE_peak_at_chrX:74869077..74869082,- | |description=CAGE_peak_at_chrX:74869077..74869082,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!5.48e-22!12;CL:0000417!5.48e-22!12;CL:0000668!5.48e-22!12;CL:0000414!5.48e-22!12;CL:0000412!5.48e-22!12;CL:0000182!5.48e-22!12 | |ontology_enrichment_celltype=CL:0000181!5.48e-22!12;CL:0000417!5.48e-22!12;CL:0000668!5.48e-22!12;CL:0000414!5.48e-22!12;CL:0000412!5.48e-22!12;CL:0000182!5.48e-22!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.26e-37;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.26e-37;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-37,12;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.14e-41;11!UBERON:0009497;7.97e-35;13!UBERON:0003104;5.82e-26;31!UBERON:0001041;1.06e-15;30 | |ontology_enrichment_development_v019=UBERON:0004161;6.14e-41;11!UBERON:0009497;7.97e-35;13!UBERON:0003104;5.82e-26;31!UBERON:0001041;1.06e-15;30 | ||
|ontology_enrichment_disease=DOID:225!2.37e-29!1;DOID:7!1.54e-18!39;DOID:74!2.05e-15!2;DOID:4468!2.37e-15!2;DOID:1287!2.26e-08!4;DOID:305!5.20e-07!106 | |ontology_enrichment_disease=DOID:225!2.37e-29!1;DOID:7!1.54e-18!39;DOID:74!2.05e-15!2;DOID:4468!2.37e-15!2;DOID:1287!2.26e-08!4;DOID:305!5.20e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:7;1.34e-20;39 | |ontology_enrichment_disease_v019=DOID:7;1.34e-20;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,4.38e-21,39;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002107!3.46e-14!19;UBERON:0006925!3.46e-14!19;UBERON:0008836!3.46e-14!19;UBERON:0008835!2.35e-12!22;UBERON:0003894!2.35e-12!22;UBERON:0009854!7.52e-12!23;UBERON:0007499!5.84e-11!25;UBERON:0009497!5.84e-11!25;UBERON:0000015!5.84e-11!25;UBERON:0002423!5.84e-11!25;UBERON:0006235!5.84e-11!25;UBERON:0004161!5.84e-11!25;UBERON:0005057!1.45e-10!26;UBERON:0009856!1.45e-10!26;UBERON:0002365!5.69e-09!31;UBERON:0002330!5.69e-09!31;UBERON:0005172!8.78e-09!55;UBERON:0005173!8.78e-09!55;UBERON:0002368!5.08e-08!35;UBERON:0002417!5.83e-08!61;UBERON:0000916!5.83e-08!61 | |ontology_enrichment_uberon=UBERON:0002107!3.46e-14!19;UBERON:0006925!3.46e-14!19;UBERON:0008836!3.46e-14!19;UBERON:0008835!2.35e-12!22;UBERON:0003894!2.35e-12!22;UBERON:0009854!7.52e-12!23;UBERON:0007499!5.84e-11!25;UBERON:0009497!5.84e-11!25;UBERON:0000015!5.84e-11!25;UBERON:0002423!5.84e-11!25;UBERON:0006235!5.84e-11!25;UBERON:0004161!5.84e-11!25;UBERON:0005057!1.45e-10!26;UBERON:0009856!1.45e-10!26;UBERON:0002365!5.69e-09!31;UBERON:0002330!5.69e-09!31;UBERON:0005172!8.78e-09!55;UBERON:0005173!8.78e-09!55;UBERON:0002368!5.08e-08!35;UBERON:0002417!5.83e-08!61;UBERON:0000916!5.83e-08!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;4.31e-14;31!UBERON:0002330;4.31e-14;31!UBERON:0002368;2.78e-13;33!UBERON:0000949;2.20e-10;43!UBERON:0002417;6.73e-10;58!UBERON:0000916;6.73e-10;58!UBERON:0005172;2.61e-08;52!UBERON:0005173;2.61e-08;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;4.31e-14;31!UBERON:0002330;4.31e-14;31!UBERON:0002368;2.78e-13;33!UBERON:0000949;2.20e-10;43!UBERON:0002417;6.73e-10;58!UBERON:0000916;6.73e-10;58!UBERON:0005172;2.61e-08;52!UBERON:0005173;2.61e-08;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.46e-24,19;UBERON:0006925,3.46e-24,19;UBERON:0008836,3.46e-24,19;UBERON:0008835,4.90e-21,22;UBERON:0003894,4.90e-21,22;UBERON:0009854,3.62e-20,23;UBERON:0007499,1.23e-18,25;UBERON:0009497,1.23e-18,25;UBERON:0000015,1.23e-18,25;UBERON:0002423,1.23e-18,25;UBERON:0006235,1.23e-18,25;UBERON:0004161,1.23e-18,25;UBERON:0009856,5.83e-18,26;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002365,3.16e-15,31;UBERON:0002330,3.16e-15,31;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0002368,1.35e-13,35;UBERON:0000949,8.78e-11,45;UBERON:0003929,3.93e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.98e-08,59;UBERON:0009569,6.64e-08,112 | |||
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|short_description=p@chrX:74869077..74869082,- | |short_description=p@chrX:74869077..74869082,- | ||
}} | }} |
Latest revision as of 09:37, 1 August 2015
Short description: | p@chrX:74869077..74869082, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:74869077..74869082, - |
Coexpression cluster: | C4281_renal_hepatocellular_Hepatocyte_liver_mesothelioma_mucinous_signet |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-37 | 12 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.46e-24 | 19 |
digestive gland | 3.46e-24 | 19 |
liver bud | 3.46e-24 | 19 |
hepatic diverticulum | 4.90e-21 | 22 |
liver primordium | 4.90e-21 | 22 |
digestive tract diverticulum | 3.62e-20 | 23 |
epithelial sac | 1.23e-18 | 25 |
epithelium of foregut-midgut junction | 1.23e-18 | 25 |
anatomical boundary | 1.23e-18 | 25 |
hepatobiliary system | 1.23e-18 | 25 |
foregut-midgut junction | 1.23e-18 | 25 |
septum transversum | 1.23e-18 | 25 |
sac | 5.83e-18 | 26 |
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
exocrine gland | 3.16e-15 | 31 |
exocrine system | 3.16e-15 | 31 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
endocrine gland | 1.35e-13 | 35 |
endocrine system | 8.78e-11 | 45 |
gut epithelium | 3.93e-09 | 54 |
trunk region element | 1.11e-08 | 101 |
gland | 1.98e-08 | 59 |
subdivision of trunk | 6.64e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.38e-21 | 39 |
carcinoma | 2.62e-08 | 106 |