FFCP PHASE1:Hg19::chr1:11751835..11751892,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10459 | |EntrezGene=10459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6764 | |HGNC=6764 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UI95 | |UniProt=Q9UI95 | ||
|association_with_transcript=-128bp_to_ENST00000235310_5end | |association_with_transcript=-128bp_to_ENST00000235310_5end | ||
|cluster_id=chr1:11751835..11751892,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_4_at_MAD2L2_5end | |description=CAGE_peak_4_at_MAD2L2_5end | ||
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|ontology_enrichment_celltype=CL:0000540!6.00e-09!6;CL:0000031!6.00e-09!6;CL:0000404!6.00e-09!6;CL:0002322!1.83e-08!5;CL:0000047!2.90e-08!8;CL:0000066!4.36e-07!254 | |ontology_enrichment_celltype=CL:0000540!6.00e-09!6;CL:0000031!6.00e-09!6;CL:0000404!6.00e-09!6;CL:0002322!1.83e-08!5;CL:0000047!2.90e-08!8;CL:0000066!4.36e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.44e-27;5!CL:0000540;1.51e-14;6!CL:0000404;1.51e-14;6!CL:0000039;1.46e-12;7!CL:0000586;1.46e-12;7!CL:0000123;1.28e-11;2!CL:0000242;1.28e-11;2!CL:0002321;5.23e-09;15!CL:0002231;1.64e-07;3 | |ontology_enrichment_celltype_v019=CL:0002322;1.44e-27;5!CL:0000540;1.51e-14;6!CL:0000404;1.51e-14;6!CL:0000039;1.46e-12;7!CL:0000586;1.46e-12;7!CL:0000123;1.28e-11;2!CL:0000242;1.28e-11;2!CL:0002321;5.23e-09;15!CL:0002231;1.64e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.37e-27,5;CL:0000540,1.59e-14,6;CL:0000031,1.59e-14,6;CL:0000404,1.59e-14,6;CL:0000039,1.48e-12,7;CL:0000586,1.48e-12,7;CL:0000242,1.42e-11,2;CL:0000047,6.41e-11,8;CL:0002231,1.98e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;1.51e-14;6!UBERON:0009117;8.15e-09;10!UBERON:0005564;8.15e-09;10 | |ontology_enrichment_development_v019=CL:0000031;1.51e-14;6!UBERON:0009117;8.15e-09;10!UBERON:0005564;8.15e-09;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.55e-09,106;DOID:0050687,8.28e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.28e-11;8!UBERON:0000922;5.87e-10;49!UBERON:0003101;5.04e-08;22!UBERON:0000079;5.04e-08;22!UBERON:0003135;5.12e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;5.28e-11;8!UBERON:0000922;5.87e-10;49!UBERON:0003101;5.04e-08;22!UBERON:0000079;5.04e-08;22!UBERON:0003135;5.12e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.35e-11,8;UBERON:0003135,5.16e-08,11;UBERON:0003101,5.45e-08,22;UBERON:0000079,5.45e-08,22 | |||
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| ||
|short_description=p4@MAD2L2 | |short_description=p4@MAD2L2 | ||
}} | }} |
Latest revision as of 09:56, 16 September 2015
Short description: | p4@MAD2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAD2L2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -128bp_to_ENST00000235310_5end |
EntrezGene: | MAD2L2 |
HGNC: | 6764 |
UniProt: | Q9UI95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.37e-27 | 5 |
neuron | 1.59e-14 | 6 |
neuroblast | 1.59e-14 | 6 |
electrically signaling cell | 1.59e-14 | 6 |
germ line cell | 1.48e-12 | 7 |
germ cell | 1.48e-12 | 7 |
Merkel cell | 1.42e-11 | 2 |
neuronal stem cell | 6.41e-11 | 8 |
epithelial cell of prostate | 1.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 5.35e-11 | 8 |
male reproductive organ | 5.16e-08 | 11 |
male organism | 5.45e-08 | 22 |
male reproductive system | 5.45e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.55e-09 | 106 |
cell type cancer | 8.28e-07 | 143 |