FFCP PHASE1:Hg19::chr4:139163398..139163413,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23657 | |EntrezGene=23657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11059 | |HGNC=11059 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPY5,A8K2U4 | |UniProt=Q9UPY5,A8K2U4 | ||
|association_with_transcript=89bp_to_ENST00000280612,NM_014331,uc011chb.1_5end | |association_with_transcript=89bp_to_ENST00000280612,NM_014331,uc011chb.1_5end | ||
|cluster_id=chr4:139163398..139163413,- | |||
|coexpression_cluster_id=C4372 | |coexpression_cluster_id=C4372 | ||
|description=CAGE_peak_4_at_SLC7A11_5end | |description=CAGE_peak_4_at_SLC7A11_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!2.31e-25!254;CL:0000063!8.75e-16!578;CL:0000548!1.06e-12!679;CL:0000004!1.06e-12!679;CL:0000255!1.06e-12!679;CL:0000012!1.73e-12!682;CL:0000076!1.21e-09!62;CL:0000223!2.42e-09!59;CL:0002076!4.00e-09!43;CL:0000860!4.60e-09!45;CL:0002057!4.58e-08!42;CL:0000003!4.54e-07!722 | |ontology_enrichment_celltype=CL:0000066!2.31e-25!254;CL:0000063!8.75e-16!578;CL:0000548!1.06e-12!679;CL:0000004!1.06e-12!679;CL:0000255!1.06e-12!679;CL:0000012!1.73e-12!682;CL:0000076!1.21e-09!62;CL:0000223!2.42e-09!59;CL:0002076!4.00e-09!43;CL:0000860!4.60e-09!45;CL:0002057!4.58e-08!42;CL:0000003!4.54e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.56e-15;33!CL:0002057;1.56e-15;33!CL:0000473;1.17e-09;39!CL:0000234;1.17e-09;39!CL:0002076;3.11e-08;42!CL:0002251;7.73e-08;20 | |ontology_enrichment_celltype_v019=CL:0000860;1.56e-15;33!CL:0002057;1.56e-15;33!CL:0000473;1.17e-09;39!CL:0000234;1.17e-09;39!CL:0002076;3.11e-08;42!CL:0002251;7.73e-08;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-28,253;CL:0000223,2.66e-11,58;CL:0000860,1.06e-10,42;CL:0002057,1.06e-10,42;CL:0002076,1.82e-10,42;CL:0000076,1.12e-09,63;CL:0000473,2.76e-08,48;CL:0000234,2.76e-08,48;CL:0002251,1.45e-07,20;CL:0002009,3.73e-07,61;CL:0002194,3.83e-07,59;CL:0000576,3.83e-07,59;CL:0000040,3.83e-07,59;CL:0000559,3.83e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.68e-08;42 | ||
|ontology_enrichment_disease=DOID:305!7.10e-22!106;DOID:0050687!1.11e-19!143;DOID:162!5.36e-17!235;DOID:14566!1.73e-16!239;DOID:1749!4.00e-07!14;DOID:299!8.08e-07!25 | |ontology_enrichment_disease=DOID:305!7.10e-22!106;DOID:0050687!1.11e-19!143;DOID:162!5.36e-17!235;DOID:14566!1.73e-16!239;DOID:1749!4.00e-07!14;DOID:299!8.08e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.54e-08;14!DOID:299;4.53e-08;25!DOID:305;8.57e-08;106 | |ontology_enrichment_disease_v019=DOID:1749;3.54e-08;14!DOID:299;4.53e-08;25!DOID:305;8.57e-08;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.45e-26,106;DOID:0050687,6.76e-21,143;DOID:162,1.37e-15,235;DOID:14566,6.45e-15,239;DOID:299,2.77e-08,25;DOID:1749,4.37e-08,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@SLC7A11 | |short_description=p4@SLC7A11 | ||
}} | }} |
Latest revision as of 05:41, 25 September 2015
Short description: | p4@SLC7A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC7A11_5end |
Coexpression cluster: | C4372_CD14_maxillary_smallcell_glioblastoma_Mammary_small_gastric |
Association with transcript: | 89bp_to_ENST00000280612, NM_014331, uc011chb.1_5end |
EntrezGene: | SLC7A11 |
HGNC: | 11059 |
UniProt: | Q9UPY5A8K2U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-28 | 253 |
endodermal cell | 2.66e-11 | 58 |
classical monocyte | 1.06e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-10 | 42 |
endo-epithelial cell | 1.82e-10 | 42 |
squamous epithelial cell | 1.12e-09 | 63 |
defensive cell | 2.76e-08 | 48 |
phagocyte | 2.76e-08 | 48 |
epithelial cell of alimentary canal | 1.45e-07 | 20 |
macrophage dendritic cell progenitor | 3.73e-07 | 61 |
monopoietic cell | 3.83e-07 | 59 |
monocyte | 3.83e-07 | 59 |
monoblast | 3.83e-07 | 59 |
promonocyte | 3.83e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.45e-26 | 106 |
cell type cancer | 6.76e-21 | 143 |
cancer | 1.37e-15 | 235 |
disease of cellular proliferation | 6.45e-15 | 239 |
adenocarcinoma | 2.77e-08 | 25 |
squamous cell carcinoma | 4.37e-08 | 14 |