FFCP PHASE1:Hg19::chr1:161039753..161039765,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=257106 | |EntrezGene=257106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27414 | |HGNC=27414 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPG0,Q7Z6I6,Q6ZTY0 | |UniProt=E7EPG0,Q7Z6I6,Q6ZTY0 | ||
|association_with_transcript=0bp_to_ENST00000368015,ENST00000368017,NM_001025598,NM_181720,uc001fxk.2,uc001fxl.2,uc001fxm.2,uc001fxn.1,uc009wtx.2_5end | |association_with_transcript=0bp_to_ENST00000368015,ENST00000368017,NM_001025598,NM_181720,uc001fxk.2,uc001fxl.2,uc001fxm.2,uc001fxn.1,uc009wtx.2_5end | ||
|cluster_id=chr1:161039753..161039765,- | |||
|description=CAGE_peak_5_at_ARHGAP30_5end | |description=CAGE_peak_5_at_ARHGAP30_5end | ||
|id=chr1:161039753..161039765,- | |id=chr1:161039753..161039765,- | ||
|ontology_enrichment_celltype=CL:0000738!2.66e-86!140;CL:0000037!1.21e-82!172;CL:0000566!1.21e-82!172;CL:0000988!2.76e-80!182;CL:0002032!7.94e-78!165;CL:0000837!7.94e-78!165;CL:0002087!1.40e-71!119;CL:0002031!1.83e-70!124;CL:0000542!3.20e-38!53;CL:0000051!3.20e-38!53;CL:0000838!2.06e-37!52;CL:0000763!5.33e-37!112;CL:0000049!5.33e-37!112;CL:0000766!3.67e-36!76;CL:0000557!7.30e-32!71;CL:0002009!1.28e-30!65;CL:0000839!6.48e-30!70;CL:0002194!2.03e-29!63;CL:0000576!2.03e-29!63;CL:0000040!2.03e-29!63;CL:0000559!2.03e-29!63;CL:0002057!5.22e-26!42;CL:0000860!2.95e-23!45;CL:0000945!2.09e-19!24;CL:0000826!2.09e-19!24;CL:0000084!1.92e-17!25;CL:0000827!1.92e-17!25;CL:0000134!1.82e-16!358;CL:0002320!2.34e-15!365;CL:0000791!4.72e-12!18;CL:0000789!4.72e-12!18;CL:0002420!4.72e-12!18;CL:0002419!4.72e-12!18;CL:0000790!4.72e-12!18;CL:0000219!1.43e-11!390;CL:0000236!2.41e-11!14;CL:0000451!1.60e-09!10;CL:0000990!7.68e-09!8;CL:0000048!6.46e-08!430;CL:0000723!2.41e-07!436;CL:0000625!3.32e-07!11;CL:0000034!6.77e-07!444 | |ontology_enrichment_celltype=CL:0000738!2.66e-86!140;CL:0000037!1.21e-82!172;CL:0000566!1.21e-82!172;CL:0000988!2.76e-80!182;CL:0002032!7.94e-78!165;CL:0000837!7.94e-78!165;CL:0002087!1.40e-71!119;CL:0002031!1.83e-70!124;CL:0000542!3.20e-38!53;CL:0000051!3.20e-38!53;CL:0000838!2.06e-37!52;CL:0000763!5.33e-37!112;CL:0000049!5.33e-37!112;CL:0000766!3.67e-36!76;CL:0000557!7.30e-32!71;CL:0002009!1.28e-30!65;CL:0000839!6.48e-30!70;CL:0002194!2.03e-29!63;CL:0000576!2.03e-29!63;CL:0000040!2.03e-29!63;CL:0000559!2.03e-29!63;CL:0002057!5.22e-26!42;CL:0000860!2.95e-23!45;CL:0000945!2.09e-19!24;CL:0000826!2.09e-19!24;CL:0000084!1.92e-17!25;CL:0000827!1.92e-17!25;CL:0000134!1.82e-16!358;CL:0002320!2.34e-15!365;CL:0000791!4.72e-12!18;CL:0000789!4.72e-12!18;CL:0002420!4.72e-12!18;CL:0002419!4.72e-12!18;CL:0000790!4.72e-12!18;CL:0000219!1.43e-11!390;CL:0000236!2.41e-11!14;CL:0000451!1.60e-09!10;CL:0000990!7.68e-09!8;CL:0000048!6.46e-08!430;CL:0000723!2.41e-07!436;CL:0000625!3.32e-07!11;CL:0000034!6.77e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.53e-28;24!CL:0000542;1.60e-27;53!CL:0000860;7.23e-22;33!CL:0002057;7.23e-22;33!CL:0000084;1.03e-21;25!CL:0002087;1.69e-20;104!CL:0000473;2.97e-19;39!CL:0000234;2.97e-19;39!CL:0000738;1.41e-18;136!CL:0000576;7.49e-18;48!CL:0000236;6.08e-15;13!CL:0000791;8.66e-14;18!CL:0000789;8.66e-14;18!CL:0002419;8.66e-14;18!CL:0000766;8.86e-14;69!CL:0000988;7.98e-11;177!CL:0000990;1.20e-10;8!CL:0000219;5.18e-09;193!CL:0000451;2.27e-08;10!CL:0000624;9.72e-08;6!CL:0000625;9.17e-07;11 | |ontology_enrichment_celltype_v019=CL:0000945;2.53e-28;24!CL:0000542;1.60e-27;53!CL:0000860;7.23e-22;33!CL:0002057;7.23e-22;33!CL:0000084;1.03e-21;25!CL:0002087;1.69e-20;104!CL:0000473;2.97e-19;39!CL:0000234;2.97e-19;39!CL:0000738;1.41e-18;136!CL:0000576;7.49e-18;48!CL:0000236;6.08e-15;13!CL:0000791;8.66e-14;18!CL:0000789;8.66e-14;18!CL:0002419;8.66e-14;18!CL:0000766;8.86e-14;69!CL:0000988;7.98e-11;177!CL:0000990;1.20e-10;8!CL:0000219;5.18e-09;193!CL:0000451;2.27e-08;10!CL:0000624;9.72e-08;6!CL:0000625;9.17e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.55e-90,136;CL:0002087,4.69e-84,115;CL:0002031,1.63e-75,120;CL:0000988,1.25e-70,177;CL:0000037,1.72e-70,168;CL:0002032,7.97e-70,161;CL:0000837,7.97e-70,161;CL:0000542,1.95e-49,53;CL:0000051,1.95e-49,53;CL:0000838,3.05e-48,52;CL:0000766,1.97e-33,72;CL:0002009,5.92e-32,61;CL:0002194,1.37e-31,59;CL:0000576,1.37e-31,59;CL:0000040,1.37e-31,59;CL:0000559,1.37e-31,59;CL:0000473,2.33e-30,48;CL:0000234,2.33e-30,48;CL:0000945,1.42e-28,24;CL:0000826,1.42e-28,24;CL:0000860,2.50e-28,42;CL:0002057,2.50e-28,42;CL:0000557,6.70e-28,67;CL:0000839,7.28e-27,66;CL:0000763,2.58e-24,108;CL:0000049,2.58e-24,108;CL:0000084,3.66e-22,25;CL:0000827,3.66e-22,25;CL:0000134,4.02e-18,354;CL:0002320,3.08e-17,361;CL:0000236,1.76e-16,14;CL:0000791,2.82e-14,18;CL:0000789,2.82e-14,18;CL:0002420,2.82e-14,18;CL:0002419,2.82e-14,18;CL:0000790,2.82e-14,18;CL:0000219,3.70e-14,386;CL:0000990,1.63e-10,8;CL:0000048,1.71e-10,427;CL:0000723,5.34e-10,433;CL:0000034,2.29e-09,441;CL:0000451,2.89e-08,10;CL:0000624,1.36e-07,6;CL:0000625,2.56e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.60e-27;53!CL:0002057;1.19e-20;42!CL:0000790;8.66e-14;18!CL:0000049;1.43e-08;108 | |ontology_enrichment_development_v019=CL:0000051;1.60e-27;53!CL:0002057;1.19e-20;42!CL:0000790;8.66e-14;18!CL:0000049;1.43e-08;108 | ||
|ontology_enrichment_disease=DOID:2531!1.24e-12!51;DOID:0060083!1.24e-12!51;DOID:0060058!7.83e-09!10;DOID:1240!4.29e-07!39 | |ontology_enrichment_disease=DOID:2531!1.24e-12!51;DOID:0060083!1.24e-12!51;DOID:0060058!7.83e-09!10;DOID:1240!4.29e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.16e-12;10 | |ontology_enrichment_disease_v019=DOID:0060058;1.16e-12;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.97e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.09e-46!102;UBERON:0003061!9.09e-46!102;UBERON:0002193!1.61e-41!112;UBERON:0002371!2.33e-28!80;UBERON:0001474!7.77e-25!86;UBERON:0002405!7.51e-23!115;UBERON:0004765!1.49e-19!101;UBERON:0001434!1.49e-19!101;UBERON:0002384!3.03e-14!375;UBERON:0000178!1.19e-13!15;UBERON:0000179!1.19e-13!15;UBERON:0000463!1.19e-13!15;UBERON:0003081!1.02e-09!216;UBERON:0004177!7.43e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!9.09e-46!102;UBERON:0003061!9.09e-46!102;UBERON:0002193!1.61e-41!112;UBERON:0002371!2.33e-28!80;UBERON:0001474!7.77e-25!86;UBERON:0002405!7.51e-23!115;UBERON:0004765!1.49e-19!101;UBERON:0001434!1.49e-19!101;UBERON:0002384!3.03e-14!375;UBERON:0000178!1.19e-13!15;UBERON:0000179!1.19e-13!15;UBERON:0000463!1.19e-13!15;UBERON:0003081!1.02e-09!216;UBERON:0004177!7.43e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-17;15!UBERON:0000179;3.28e-17;15!UBERON:0000463;3.28e-17;15!UBERON:0002390;1.71e-12;32!UBERON:0004177;4.18e-07;5!UBERON:0005057;4.18e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.28e-17;15!UBERON:0000179;3.28e-17;15!UBERON:0000463;3.28e-17;15!UBERON:0002390;1.71e-12;32!UBERON:0004177;4.18e-07;5!UBERON:0005057;4.18e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.22e-46,98;UBERON:0003061,4.22e-46,98;UBERON:0002193,1.36e-41,108;UBERON:0002405,1.47e-27,93;UBERON:0002371,1.50e-24,76;UBERON:0001474,8.78e-22,82;UBERON:0004765,1.09e-18,90;UBERON:0000178,1.40e-17,15;UBERON:0000179,1.40e-17,15;UBERON:0000463,1.40e-17,15;UBERON:0002384,4.87e-16,371;UBERON:0001434,1.49e-15,100;UBERON:0003081,4.27e-13,203;UBERON:0004177,1.74e-09,7;UBERON:0005057,1.74e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,3.03772180964799,2.20390187678302,1.96682138424452,1.53531759238885,0.619264493264304,0,0,0,1.54934401160603,1.27952309238679,0.880801318004542,1.10799081706375,0,0.868043482863407,0.895661896959697,0.971680998056939,0.77272670290256,1.74477886535478,3.77875943688809,3.88134497900506,3.0215774797739,5.34518254428373,1.23882548358041,2.01384674625505,1.2808035326455,1.18241114944293,1.03423704220986,0,1.35426486594342,6.02375486536335,4.36649840092553,3.82029923556644,4.59125838556354,3.85114832491312,3.83602275479425,1.31940520074686,2.59302754908121,2.55734850319616,0.870627715885752,2.26954089876456,0,1.25624332628372,1.0429658368404,1.08594422352558,0.605399502633369,1.47311054395026,0.949387162322653,1.05627643155971,2.12604299965044,1.25795187305026,0.786300418025466,1.50176892841506,0.803627933485401,3.42015292489498,1.79025009479181,2.73996230646951,3.51992488922645,3.82297027883492,3.55803701545422,3.41384178053206,2.80277190925209,2.29900975981793,5.94940385506376,5.72432252721218,1.70763890732835,1.76171156811282,1.91136614062614,0,0,0.526768169550154,2.16380747125216,1.57204305099666,1.23360899399706,3.00935691703221,2.28145586643513,2.8406868344084,0,1.78256731016278,1.76763544484902,0.886135578334485,1.35401931882508,2.17755243533648,2.73124629875744,4.60426132890293,3.03985019564433,2.89803085735052,2.81744470007915,1.33770414044857,4.18142095219907,2.03956816855619,1.14966148080576,2.40539211837841,1.01207876807801,1.91139248594458,0,1.90090408889675,1.95747654801105,2.17577238962511,2.49861453104692,1.89421801635213,2.46338399076314,1.81446068902259,0.267440195783507,0.579297615531196,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.327447688744282,0,0,3.24547393654683,2.26368658489047,3.32394901297163,1.19245312152671,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,1.8720341211139,1.63494278517601,0.93733833986777,0,0,0,0,0,0.985326475791887,0.792435906119034,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,3.13838403181876,1.37921532141349,0.862510299438069,0.77005821767849,0,0,0,0,0,2.24702107184155,2.99161459204025,5.38740167466846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.72571360654893,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,1.52234282769651,5.35246044999663,3.98753031021914,4.04994018278241,3.29089818468955,2.59389324477087,1.62009431171434,6.34500141035416,0,0,0,2.04383492638291,0,2.20539714380084,1.75368900001705,0.399158742865633,0.383010740264733,0.423347165447766,0,0,0.684704037099577,0.47003968731907,0,0.169291777801603,1.2847046008296,0.605399121573143,0.425846237690326,0.687010689511529,0.921722292925374,1.11838053946208,1.16794399198336,0.976940477010201,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,3.34330152832435,0,0,0,0,0.994147647766298,0,0,3.13127361030843,0,0.19924798825107,1.65770349318689,0,0,3.69254416383208,0,0,0,1.02314474045374,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,1.22206028986725,1.77912677208373,3.21266241260907,2.50612678813093,0.134802265961354,0,0,1.27718352450966,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,3.15464825135177,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,2.11683330164461,0,0,0,0.137539436597234,0,0.449947783103001,2.32140586367385,0,0,0.236417121897595,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,0.320362237703084,0,0.828478110694391,0.992332043623902,4.74267916555066,1.21792598380896,0,0,0,0,0,0,0,0,0.500763722825999,0,0.332787154610557,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,3.70234586794838,5.84605297378798,3.59843867362857,0,0,0,1.79988656269437,0.640150378164845,3.09986963389468,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236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| ||
|short_description=p5@ARHGAP30 | |short_description=p5@ARHGAP30 | ||
}} | }} |
Latest revision as of 04:33, 18 September 2015
Short description: | p5@ARHGAP30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARHGAP30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368015, ENST00000368017, NM_001025598, NM_181720, uc001fxk.2, uc001fxl.2, uc001fxm.2, uc001fxn.1, uc009wtx.2_5end |
EntrezGene: | ARHGAP30 |
HGNC: | 27414 |
UniProt: | E7EPG0Q7Z6I6Q6ZTY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.22e-46 | 98 |
blood island | 4.22e-46 | 98 |
hemolymphoid system | 1.36e-41 | 108 |
immune system | 1.47e-27 | 93 |
bone marrow | 1.50e-24 | 76 |
bone element | 8.78e-22 | 82 |
skeletal element | 1.09e-18 | 90 |
blood | 1.40e-17 | 15 |
haemolymphatic fluid | 1.40e-17 | 15 |
organism substance | 1.40e-17 | 15 |
connective tissue | 4.87e-16 | 371 |
skeletal system | 1.49e-15 | 100 |
lateral plate mesoderm | 4.27e-13 | 203 |
hemopoietic organ | 1.74e-09 | 7 |
immune organ | 1.74e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.97e-12 | 10 |