FFCP PHASE1:Hg19::chr3:46449788..46449802,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9034 | |EntrezGene=9034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1612 | |HGNC=1612 | ||
|TSSclassifier=strong | |||
|UniProt=O00421 | |UniProt=O00421 | ||
|association_with_transcript=217bp_to_AJ344142,AY337001,DQ892102,DQ895296_5end | |association_with_transcript=217bp_to_AJ344142,AY337001,DQ892102,DQ895296_5end | ||
|cluster_id=chr3:46449788..46449802,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_16_at_CCRL2_5end | |description=CAGE_peak_16_at_CCRL2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!3.26e-99!42;CL:0000860!2.54e-92!45;CL:0002194!1.15e-63!63;CL:0000576!1.15e-63!63;CL:0000040!1.15e-63!63;CL:0000559!1.15e-63!63;CL:0000839!9.98e-62!70;CL:0002009!1.32e-61!65;CL:0000766!3.60e-61!76;CL:0000557!8.25e-61!71;CL:0000763!2.82e-40!112;CL:0000049!2.82e-40!112;CL:0002031!3.66e-33!124;CL:0002087!6.24e-32!119;CL:0000738!2.19e-31!140;CL:0002032!5.67e-26!165;CL:0000837!5.67e-26!165;CL:0000037!9.77e-25!172;CL:0000566!9.77e-25!172;CL:0000988!3.92e-23!182;CL:0000134!1.76e-10!358;CL:0002320!3.47e-10!365;CL:0000219!3.80e-09!390;CL:0000048!6.71e-08!430;CL:0000723!1.01e-07!436;CL:0000034!1.71e-07!444 | |ontology_enrichment_celltype=CL:0002057!3.26e-99!42;CL:0000860!2.54e-92!45;CL:0002194!1.15e-63!63;CL:0000576!1.15e-63!63;CL:0000040!1.15e-63!63;CL:0000559!1.15e-63!63;CL:0000839!9.98e-62!70;CL:0002009!1.32e-61!65;CL:0000766!3.60e-61!76;CL:0000557!8.25e-61!71;CL:0000763!2.82e-40!112;CL:0000049!2.82e-40!112;CL:0002031!3.66e-33!124;CL:0002087!6.24e-32!119;CL:0000738!2.19e-31!140;CL:0002032!5.67e-26!165;CL:0000837!5.67e-26!165;CL:0000037!9.77e-25!172;CL:0000566!9.77e-25!172;CL:0000988!3.92e-23!182;CL:0000134!1.76e-10!358;CL:0002320!3.47e-10!365;CL:0000219!3.80e-09!390;CL:0000048!6.71e-08!430;CL:0000723!1.01e-07!436;CL:0000034!1.71e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.61e-76;33!CL:0002057;3.61e-76;33!CL:0000473;8.40e-53;39!CL:0000234;8.40e-53;39!CL:0000576;1.67e-29;48!CL:0000766;1.88e-21;69!CL:0002087;1.13e-15;104!CL:0000763;1.67e-14;100 | |ontology_enrichment_celltype_v019=CL:0000860;3.61e-76;33!CL:0002057;3.61e-76;33!CL:0000473;8.40e-53;39!CL:0000234;8.40e-53;39!CL:0000576;1.67e-29;48!CL:0000766;1.88e-21;69!CL:0002087;1.13e-15;104!CL:0000763;1.67e-14;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-64,42;CL:0002057,1.47e-64,42;CL:0000473,2.29e-56,48;CL:0000234,2.29e-56,48;CL:0002194,6.85e-45,59;CL:0000576,6.85e-45,59;CL:0000040,6.85e-45,59;CL:0000559,6.85e-45,59;CL:0002009,2.08e-43,61;CL:0000839,4.32e-40,66;CL:0000557,1.74e-39,67;CL:0000766,1.05e-36,72;CL:0000763,3.32e-24,108;CL:0000049,3.32e-24,108;CL:0002087,1.13e-22,115;CL:0002031,1.10e-21,120;CL:0000738,5.24e-19,136;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-44;42!CL:0000049;1.34e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.48e-44;42!CL:0000049;1.34e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.43e-53!80;UBERON:0001474!1.41e-49!86;UBERON:0004765!1.22e-41!101;UBERON:0001434!1.22e-41!101;UBERON:0002390!3.41e-41!102;UBERON:0003061!3.41e-41!102;UBERON:0002193!3.71e-37!112;UBERON:0002405!4.42e-36!115;UBERON:0002204!1.61e-23!167;UBERON:0003081!3.58e-17!216;UBERON:0002384!8.75e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!1.43e-53!80;UBERON:0001474!1.41e-49!86;UBERON:0004765!1.22e-41!101;UBERON:0001434!1.22e-41!101;UBERON:0002390!3.41e-41!102;UBERON:0003061!3.41e-41!102;UBERON:0002193!3.71e-37!112;UBERON:0002405!4.42e-36!115;UBERON:0002204!1.61e-23!167;UBERON:0003081!3.58e-17!216;UBERON:0002384!8.75e-10!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.63e-35,76;UBERON:0001474,3.76e-32,82;UBERON:0004765,3.18e-29,90;UBERON:0002405,2.96e-28,93;UBERON:0002390,9.06e-27,98;UBERON:0003061,9.06e-27,98;UBERON:0001434,3.24e-26,100;UBERON:0002193,3.32e-24,108;UBERON:0002204,2.91e-15,167;UBERON:0003081,2.49e-12,203;UBERON:0000926,1.94e-07,315;UBERON:0004120,1.94e-07,315;UBERON:0006603,1.94e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.290796477559129,0,0,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,2.30544635876191,1.41889337933151,6.20542225325913,2.5819387343353,6.77132432971709,0,0.272906150057846,0.224723484445085,9.18251677112708,4.49300637906531,7.03270838378945,0,0,0.426224750532694,3.77272010217159,3.40431134814684,1.24564449799115,0.502497330513487,0,0.65156653411535,1.81619850790011,3.68277635987565,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.290796477559129,0,0,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,2.30544635876191,1.41889337933151,6.20542225325913,2.5819387343353,6.77132432971709,0,0.272906150057846,0.224723484445085,9.18251677112708,4.49300637906531,7.03270838378945,0,0,0.426224750532694,3.77272010217159,3.40431134814684,1.24564449799115,0.502497330513487,0,0.65156653411535,1.81619850790011,3.68277635987565,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@CCRL2 | |short_description=p16@CCRL2 | ||
}} | }} |
Latest revision as of 11:10, 18 September 2015
Short description: | p16@CCRL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CCRL2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 217bp_to_AJ344142, AY337001, DQ892102, DQ895296_5end |
EntrezGene: | CCRL2 |
HGNC: | 1612 |
UniProt: | O00421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-64 | 42 |
defensive cell | 2.29e-56 | 48 |
phagocyte | 2.29e-56 | 48 |
monopoietic cell | 6.85e-45 | 59 |
monocyte | 6.85e-45 | 59 |
monoblast | 6.85e-45 | 59 |
promonocyte | 6.85e-45 | 59 |
macrophage dendritic cell progenitor | 2.08e-43 | 61 |
myeloid lineage restricted progenitor cell | 4.32e-40 | 66 |
granulocyte monocyte progenitor cell | 1.74e-39 | 67 |
myeloid leukocyte | 1.05e-36 | 72 |
myeloid cell | 3.32e-24 | 108 |
common myeloid progenitor | 3.32e-24 | 108 |
nongranular leukocyte | 1.13e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.10e-21 | 120 |
leukocyte | 5.24e-19 | 136 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.63e-35 | 76 |
bone element | 3.76e-32 | 82 |
skeletal element | 3.18e-29 | 90 |
immune system | 2.96e-28 | 93 |
hematopoietic system | 9.06e-27 | 98 |
blood island | 9.06e-27 | 98 |
skeletal system | 3.24e-26 | 100 |
hemolymphoid system | 3.32e-24 | 108 |
musculoskeletal system | 2.91e-15 | 167 |
lateral plate mesoderm | 2.49e-12 | 203 |
mesoderm | 1.94e-07 | 315 |
mesoderm-derived structure | 1.94e-07 | 315 |
presumptive mesoderm | 1.94e-07 | 315 |