FFCP PHASE1:Hg19::chr1:201798277..201798339,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55705 | |EntrezGene=55705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19425 | |HGNC=19425 | ||
|TSSclassifier=strong | |||
|UniProt=Q96P70 | |UniProt=Q96P70 | ||
|association_with_transcript=0bp_to_ENST00000464348,NM_018085,uc001gwz.2_5end | |association_with_transcript=0bp_to_ENST00000464348,NM_018085,uc001gwz.2_5end | ||
|cluster_id=chr1:201798277..201798339,+ | |||
|description=CAGE_peak_1_at_IPO9_5end | |description=CAGE_peak_1_at_IPO9_5end | ||
|id=chr1:201798277..201798339,+ | |id=chr1:201798277..201798339,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.23e-11!59;CL:0000333!2.12e-11!41;CL:0000066!5.52e-11!254;CL:0002319!1.29e-09!25;CL:0000221!1.38e-09!71;CL:0002321!7.48e-09!248;CL:0000220!1.83e-08!246;CL:0002139!3.66e-08!24;CL:0000115!8.04e-08!35;CL:0002078!1.46e-07!44;CL:0000095!2.36e-07!17;CL:0000123!2.36e-07!17 | |ontology_enrichment_celltype=CL:0000133!1.23e-11!59;CL:0000333!2.12e-11!41;CL:0000066!5.52e-11!254;CL:0002319!1.29e-09!25;CL:0000221!1.38e-09!71;CL:0002321!7.48e-09!248;CL:0000220!1.83e-08!246;CL:0002139!3.66e-08!24;CL:0000115!8.04e-08!35;CL:0002078!1.46e-07!44;CL:0000095!2.36e-07!17;CL:0000123!2.36e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.09e-09;25!CL:0002139;4.74e-08;24!CL:0000095;1.98e-07;17!CL:0000115;2.60e-07;36 | |ontology_enrichment_celltype_v019=CL:0002319;1.09e-09;25!CL:0002139;4.74e-08;24!CL:0000095;1.98e-07;17!CL:0000115;2.60e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.23e-11,59;CL:0000333,2.12e-11,41;CL:0000066,5.82e-11,253;CL:0002319,1.29e-09,25;CL:0002321,4.92e-09,250;CL:0000221,5.89e-09,72;CL:0002139,3.66e-08,24;CL:0000115,4.95e-08,36;CL:0002078,9.08e-08,45;CL:0000095,2.36e-07,17;CL:0000123,2.36e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!7.95e-12!235;DOID:14566!5.54e-11!239;DOID:0050687!9.20e-11!143;DOID:305!2.36e-08!106 | |ontology_enrichment_disease=DOID:162!7.95e-12!235;DOID:14566!5.54e-11!239;DOID:0050687!9.20e-11!143;DOID:305!2.36e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,7.95e-12,235;DOID:14566,5.54e-11,239;DOID:0050687,9.20e-11,143;DOID:305,2.36e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.20e-14!94;UBERON:0001016!1.20e-14!94;UBERON:0000924!6.91e-14!173;UBERON:0006601!6.91e-14!173;UBERON:0004121!1.60e-13!169;UBERON:0005743!5.08e-13!86;UBERON:0001017!1.45e-12!82;UBERON:0000119!2.49e-11!312;UBERON:0000955!1.20e-10!69;UBERON:0006238!1.20e-10!69;UBERON:0000483!1.37e-10!309;UBERON:0000064!2.98e-10!219;UBERON:0002346!1.11e-09!90;UBERON:0003075!2.22e-09!86;UBERON:0007284!2.22e-09!86;UBERON:0000033!7.40e-09!123;UBERON:0000477!9.48e-09!286;UBERON:0000153!1.10e-08!129;UBERON:0007811!1.10e-08!129;UBERON:0003056!1.58e-08!61;UBERON:0002616!1.75e-07!59;UBERON:0001893!9.38e-07!34 | |ontology_enrichment_uberon=UBERON:0000073!1.20e-14!94;UBERON:0001016!1.20e-14!94;UBERON:0000924!6.91e-14!173;UBERON:0006601!6.91e-14!173;UBERON:0004121!1.60e-13!169;UBERON:0005743!5.08e-13!86;UBERON:0001017!1.45e-12!82;UBERON:0000119!2.49e-11!312;UBERON:0000955!1.20e-10!69;UBERON:0006238!1.20e-10!69;UBERON:0000483!1.37e-10!309;UBERON:0000064!2.98e-10!219;UBERON:0002346!1.11e-09!90;UBERON:0003075!2.22e-09!86;UBERON:0007284!2.22e-09!86;UBERON:0000033!7.40e-09!123;UBERON:0000477!9.48e-09!286;UBERON:0000153!1.10e-08!129;UBERON:0007811!1.10e-08!129;UBERON:0003056!1.58e-08!61;UBERON:0002616!1.75e-07!59;UBERON:0001893!9.38e-07!34 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.25e-14,89;UBERON:0004121,8.00e-13,171;UBERON:0000924,8.00e-13,171;UBERON:0006601,8.00e-13,171;UBERON:0001017,9.36e-13,81;UBERON:0000955,7.76e-11,68;UBERON:0006238,7.76e-11,68;UBERON:0000119,2.23e-10,309;UBERON:0000483,1.13e-09,306;UBERON:0011216,1.54e-09,223;UBERON:0010371,3.02e-09,104;UBERON:0002346,4.90e-09,86;UBERON:0003056,7.75e-09,61;UBERON:0003075,9.77e-09,82;UBERON:0007284,9.77e-09,82;UBERON:0000073,4.47e-07,53;UBERON:0002616,4.47e-07,53;UBERON:0010314,5.81e-07,132;UBERON:0001893,9.38e-07,34 | |||
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| ||
|short_description=p1@IPO9 | |short_description=p1@IPO9 | ||
}} | }} |
Latest revision as of 19:07, 19 September 2015
Short description: | p1@IPO9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IPO9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464348, NM_018085, uc001gwz.2_5end |
EntrezGene: | IPO9 |
HGNC: | 19425 |
UniProt: | Q96P70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.23e-11 | 59 |
migratory neural crest cell | 2.12e-11 | 41 |
epithelial cell | 5.82e-11 | 253 |
neural cell | 1.29e-09 | 25 |
embryonic cell | 4.92e-09 | 250 |
ectodermal cell | 5.89e-09 | 72 |
endothelial cell of vascular tree | 3.66e-08 | 24 |
endothelial cell | 4.95e-08 | 36 |
meso-epithelial cell | 9.08e-08 | 45 |
neuron associated cell | 2.36e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.36e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.25e-14 | 89 |
ectoderm-derived structure | 8.00e-13 | 171 |
ectoderm | 8.00e-13 | 171 |
presumptive ectoderm | 8.00e-13 | 171 |
central nervous system | 9.36e-13 | 81 |
brain | 7.76e-11 | 68 |
future brain | 7.76e-11 | 68 |
cell layer | 2.23e-10 | 309 |
epithelium | 1.13e-09 | 306 |
organ system subdivision | 1.54e-09 | 223 |
ecto-epithelium | 3.02e-09 | 104 |
neurectoderm | 4.90e-09 | 86 |
pre-chordal neural plate | 7.75e-09 | 61 |
neural plate | 9.77e-09 | 82 |
presumptive neural plate | 9.77e-09 | 82 |
regional part of nervous system | 4.47e-07 | 53 |
regional part of brain | 4.47e-07 | 53 |
structure with developmental contribution from neural crest | 5.81e-07 | 132 |
telencephalon | 9.38e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.95e-12 | 235 |
disease of cellular proliferation | 5.54e-11 | 239 |
cell type cancer | 9.20e-11 | 143 |
carcinoma | 2.36e-08 | 106 |