FFCP PHASE1:Hg19::chr10:81967456..81967471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=439990 | |EntrezGene=439990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000422847,NR_038464,uc001kbv.2_5end | |association_with_transcript=0bp_to_ENST00000422847,NR_038464,uc001kbv.2_5end | ||
|cluster_id=chr10:81967456..81967471,+ | |||
|description=CAGE_peak_3_at_LOC439990_5end | |description=CAGE_peak_3_at_LOC439990_5end | ||
|id=chr10:81967456..81967471,+ | |id=chr10:81967456..81967471,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.56e-12!254;CL:0000077!3.81e-07!19 | |ontology_enrichment_celltype=CL:0000066!5.56e-12!254;CL:0000077!3.81e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.81e-07;2!CL:0002535;1.81e-07;2 | |ontology_enrichment_celltype_v019=CL:1000415;1.81e-07;2!CL:0002535;1.81e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.45e-07,2;CL:1000415,1.64e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!7.67e-29!106;DOID:0050687!6.57e-23!143;DOID:14566!4.05e-16!239;DOID:162!1.40e-15!235;DOID:299!1.50e-08!25;DOID:0050615!2.26e-08!16;DOID:1749!4.09e-08!14;DOID:1324!2.26e-07!15 | |ontology_enrichment_disease=DOID:305!7.67e-29!106;DOID:0050687!6.57e-23!143;DOID:14566!4.05e-16!239;DOID:162!1.40e-15!235;DOID:299!1.50e-08!25;DOID:0050615!2.26e-08!16;DOID:1749!4.09e-08!14;DOID:1324!2.26e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.08e-22;14!DOID:1325;4.58e-08;7!DOID:3904;4.58e-08;7!DOID:3910;1.81e-07;2 | |ontology_enrichment_disease_v019=DOID:1749;3.08e-22;14!DOID:1325;4.58e-08;7!DOID:3904;4.58e-08;7!DOID:3910;1.81e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.89e-22,14;DOID:305,6.73e-13,106;DOID:0050687,3.39e-09,143;DOID:1325,5.28e-08,7;DOID:3904,5.28e-08,7;DOID:3910,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005157!3.77e-08!51;UBERON:0001007!5.50e-08!155;UBERON:0001555!5.50e-08!155;UBERON:0007026!5.50e-08!155;UBERON:0000481!9.56e-08!347;UBERON:0000077!1.53e-07!130;UBERON:0004119!1.54e-07!169;UBERON:0000925!1.54e-07!169;UBERON:0006595!1.54e-07!169;UBERON:0005153!3.46e-07!37;UBERON:0004921!5.12e-07!129;UBERON:0004185!5.12e-07!129 | |ontology_enrichment_uberon=UBERON:0005157!3.77e-08!51;UBERON:0001007!5.50e-08!155;UBERON:0001555!5.50e-08!155;UBERON:0007026!5.50e-08!155;UBERON:0000481!9.56e-08!347;UBERON:0000077!1.53e-07!130;UBERON:0004119!1.54e-07!169;UBERON:0000925!1.54e-07!169;UBERON:0006595!1.54e-07!169;UBERON:0005153!3.46e-07!37;UBERON:0004921!5.12e-07!129;UBERON:0004185!5.12e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;9.15e-14;4!UBERON:0004785;9.15e-14;4!UBERON:0001264;1.11e-11;10!UBERON:0002075;3.29e-11;18!UBERON:0000945;6.15e-11;5!UBERON:0010039;6.15e-11;5!UBERON:0000974;1.75e-09;6!UBERON:0004903;1.81e-07;2!UBERON:0006955;1.81e-07;2!UBERON:0004801;1.81e-07;2!UBERON:0002173;1.81e-07;2!UBERON:0002186;1.81e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003343;9.15e-14;4!UBERON:0004785;9.15e-14;4!UBERON:0001264;1.11e-11;10!UBERON:0002075;3.29e-11;18!UBERON:0000945;6.15e-11;5!UBERON:0010039;6.15e-11;5!UBERON:0000974;1.75e-09;6!UBERON:0004903;1.81e-07;2!UBERON:0006955;1.81e-07;2!UBERON:0004801;1.81e-07;2!UBERON:0002173;1.81e-07;2!UBERON:0002186;1.81e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.59e-14,4;UBERON:0004785,8.59e-14,4;UBERON:0001264,9.76e-12,10;UBERON:0002075,2.87e-11,18;UBERON:0006955,1.45e-07,2;UBERON:0004801,1.45e-07,2;UBERON:0004903,2.40e-07,2;UBERON:0002173,2.40e-07,2;UBERON:0002186,2.40e-07,2;UBERON:0000945,3.45e-07,8;UBERON:0010039,3.45e-07,8 | |||
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| ||
|short_description=p3@LOC439990 | |short_description=p3@LOC439990 | ||
}} | }} |
Latest revision as of 15:06, 19 September 2015
Short description: | p3@LOC439990 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC439990_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422847, NR_038464, uc001kbv.2_5end |
EntrezGene: | LOC439990 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.45e-07 | 2 |
epithelial cell of gall bladder | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.59e-14 | 4 |
respiratory system mucosa | 8.59e-14 | 4 |
pancreas | 9.76e-12 | 10 |
viscus | 2.87e-11 | 18 |
uterine epithelium | 1.45e-07 | 2 |
cervix epithelium | 1.45e-07 | 2 |
bronchoalveolar duct junction | 2.40e-07 | 2 |
alveolar duct | 2.40e-07 | 2 |
bronchiole | 2.40e-07 | 2 |
stomach | 3.45e-07 | 8 |
food storage organ | 3.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.89e-22 | 14 |
carcinoma | 6.73e-13 | 106 |
cell type cancer | 3.39e-09 | 143 |
bronchus cancer | 5.28e-08 | 7 |
bronchogenic carcinoma | 5.28e-08 | 7 |
lung adenocarcinoma | 2.40e-07 | 2 |