FFCP PHASE1:Hg19::chr18:61442726..61442743,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8710 | |EntrezGene=8710 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13902 | |HGNC=13902 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZC0 | |UniProt=F5GZC0 | ||
|association_with_transcript=71bp_to_ENST00000540675_5end | |association_with_transcript=71bp_to_ENST00000540675_5end | ||
|cluster_id=chr18:61442726..61442743,+ | |||
|description=CAGE_peak_4_at_SERPINB7_5end | |description=CAGE_peak_4_at_SERPINB7_5end | ||
|id=chr18:61442726..61442743,+ | |id=chr18:61442726..61442743,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.20e-15!180;CL:0000057!1.08e-14!75;CL:0002620!1.75e-14!23;CL:0002334!2.94e-11!12;CL:0000548!7.15e-09!679;CL:0000004!7.15e-09!679;CL:0000255!7.15e-09!679;CL:0000012!1.13e-08!682;CL:0002371!1.74e-08!591;CL:0000144!3.77e-08!625;CL:0000188!4.27e-08!9;CL:0002537!6.75e-08!5;CL:0002077!5.73e-07!33 | |ontology_enrichment_celltype=CL:0000055!4.20e-15!180;CL:0000057!1.08e-14!75;CL:0002620!1.75e-14!23;CL:0002334!2.94e-11!12;CL:0000548!7.15e-09!679;CL:0000004!7.15e-09!679;CL:0000255!7.15e-09!679;CL:0000012!1.13e-08!682;CL:0002371!1.74e-08!591;CL:0000144!3.77e-08!625;CL:0000188!4.27e-08!9;CL:0002537!6.75e-08!5;CL:0002077!5.73e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.97e-22;23!CL:0002579;2.88e-12;3!CL:0002334;6.74e-11;12!CL:0002617;1.47e-08;2!CL:0002537;9.95e-08;5 | |ontology_enrichment_celltype_v019=CL:0002620;6.97e-22;23!CL:0002579;2.88e-12;3!CL:0002334;6.74e-11;12!CL:0002617;1.47e-08;2!CL:0002537;9.95e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.10e-22,23;CL:0000057,1.79e-15,76;CL:0002579,3.37e-12,3;CL:0002334,7.14e-11,12;CL:0002617,2.24e-08,2;CL:0002537,1.25e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.42e-07;5!DOID:450;3.42e-07;5!DOID:66;3.42e-07;5!DOID:423;3.42e-07;5!DOID:0080000;3.42e-07;5!DOID:11722;3.42e-07;5 | |ontology_enrichment_disease_v019=DOID:17;3.42e-07;5!DOID:450;3.42e-07;5!DOID:66;3.42e-07;5!DOID:423;3.42e-07;5!DOID:0080000;3.42e-07;5!DOID:11722;3.42e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.97e-07,5;DOID:450,2.97e-07,5;DOID:66,2.97e-07,5;DOID:423,2.97e-07,5;DOID:0080000,2.97e-07,5;DOID:11722,2.97e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.28e-16!95;UBERON:0002097!2.21e-16!40;UBERON:0002199!3.38e-15!45;UBERON:0002416!3.38e-15!45;UBERON:0000486!6.44e-08!82;UBERON:0000305!2.41e-07!7;UBERON:0000475!6.83e-07!365;UBERON:0003688!9.66e-07!6;UBERON:0002358!9.66e-07!6;UBERON:0003684!9.66e-07!6;UBERON:0001178!9.66e-07!6 | |ontology_enrichment_uberon=UBERON:0003102!1.28e-16!95;UBERON:0002097!2.21e-16!40;UBERON:0002199!3.38e-15!45;UBERON:0002416!3.38e-15!45;UBERON:0000486!6.44e-08!82;UBERON:0000305!2.41e-07!7;UBERON:0000475!6.83e-07!365;UBERON:0003688!9.66e-07!6;UBERON:0002358!9.66e-07!6;UBERON:0003684!9.66e-07!6;UBERON:0001178!9.66e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.59e-15;41!UBERON:0002199;3.09e-12;46!UBERON:0002416;3.09e-12;46!UBERON:0003102;2.99e-11;50!UBERON:0003688;2.36e-10;6!UBERON:0002358;2.36e-10;6!UBERON:0003684;2.36e-10;6!UBERON:0001178;2.36e-10;6!UBERON:0004457;6.55e-07;9!UBERON:0000042;6.55e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002097;1.59e-15;41!UBERON:0002199;3.09e-12;46!UBERON:0002416;3.09e-12;46!UBERON:0003102;2.99e-11;50!UBERON:0003688;2.36e-10;6!UBERON:0002358;2.36e-10;6!UBERON:0003684;2.36e-10;6!UBERON:0001178;2.36e-10;6!UBERON:0004457;6.55e-07;9!UBERON:0000042;6.55e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.77e-20,41;UBERON:0002199,7.08e-20,46;UBERON:0002416,7.08e-20,46;UBERON:0003688,2.02e-10,6;UBERON:0002358,2.02e-10,6;UBERON:0003684,2.02e-10,6;UBERON:0001178,2.02e-10,6;UBERON:0003102,3.42e-09,99 | |||
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| ||
|short_description=p4@SERPINB7 | |short_description=p4@SERPINB7 | ||
}} | }} |
Latest revision as of 04:23, 20 September 2015
Short description: | p4@SERPINB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SERPINB7_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000540675_5end |
EntrezGene: | SERPINB7 |
HGNC: | 13902 |
UniProt: | F5GZC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.10e-22 | 23 |
fibroblast | 1.79e-15 | 76 |
omentum preadipocyte | 3.37e-12 | 3 |
preadipocyte | 7.14e-11 | 12 |
adipocyte of breast | 2.24e-08 | 2 |
amnion mesenchymal stem cell | 1.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.77e-20 | 41 |
integument | 7.08e-20 | 46 |
integumental system | 7.08e-20 | 46 |
omentum | 2.02e-10 | 6 |
peritoneum | 2.02e-10 | 6 |
abdominal cavity | 2.02e-10 | 6 |
visceral peritoneum | 2.02e-10 | 6 |
surface structure | 3.42e-09 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.97e-07 | 5 |
myotonic disease | 2.97e-07 | 5 |
muscle tissue disease | 2.97e-07 | 5 |
myopathy | 2.97e-07 | 5 |
muscular disease | 2.97e-07 | 5 |
myotonic dystrophy | 2.97e-07 | 5 |