FFCP PHASE1:Hg19::chr11:58940817..58940826,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58940817..58940826,+ | |||
|description=CAGE_peak_at_chr11:58940817..58940826,+ | |description=CAGE_peak_at_chr11:58940817..58940826,+ | ||
|id=chr11:58940817..58940826,+ | |id=chr11:58940817..58940826,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.39e-18!43;CL:0000223!8.95e-13!59;CL:0002251!1.29e-12!21;CL:0002368!6.86e-08!13;CL:0000066!3.70e-07!254;CL:0000622!8.45e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.39e-18!43;CL:0000223!8.95e-13!59;CL:0002251!1.29e-12!21;CL:0002368!6.86e-08!13;CL:0000066!3.70e-07!254;CL:0000622!8.45e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.91e-15;2!CL:1000448;1.91e-15;2!CL:0002308;1.91e-15;2!CL:0002140;1.91e-15;2!CL:0002541;9.43e-11;3!CL:0002166;9.43e-11;3!CL:0000307;9.43e-11;3!CL:0002159;4.56e-09;14!CL:0000622;5.86e-07;5!CL:0000349;6.38e-07;19 | |ontology_enrichment_celltype_v019=CL:0000317;1.91e-15;2!CL:1000448;1.91e-15;2!CL:0002308;1.91e-15;2!CL:0002140;1.91e-15;2!CL:0002541;9.43e-11;3!CL:0002166;9.43e-11;3!CL:0000307;9.43e-11;3!CL:0002159;4.56e-09;14!CL:0000622;5.86e-07;5!CL:0000349;6.38e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.78e-15,2;CL:1000448,1.78e-15,2;CL:0002308,1.78e-15,2;CL:0002140,1.78e-15,2;CL:0002166,7.42e-11,3;CL:0000068,9.90e-11,3;CL:0000069,9.90e-11,3;CL:0000307,9.90e-11,3;CL:0000377,9.90e-11,3;CL:0002541,1.20e-10,3;CL:0002159,4.04e-09,14;CL:0000622,5.70e-07,5;CL:0000349,7.18e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.15e-15;2!UBERON:0010056;1.15e-15;2!CL:0000377;9.43e-11;3 | |ontology_enrichment_development_v019=UBERON:0008814;1.15e-15;2!UBERON:0010056;1.15e-15;2!CL:0000377;9.43e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;3.96e-09;14 | |ontology_enrichment_disease_v019=DOID:1749;3.96e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,3.72e-09,14 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.78e-15,2;UBERON:0007771,1.78e-15,2;UBERON:0003297,1.78e-15,2;UBERON:0001821,1.78e-15,2;UBERON:0003487,1.78e-15,2;UBERON:0001820,1.78e-15,2;UBERON:0005089,1.78e-15,2;UBERON:0005088,1.78e-15,2;UBERON:0001723,6.73e-11,3;UBERON:0001033,6.73e-11,3;UBERON:0010056,6.73e-11,3;UBERON:0000920,1.20e-10,3;UBERON:0003343,1.70e-08,4;UBERON:0004785,1.70e-08,4;UBERON:0001708,1.82e-08,4;UBERON:0008895,1.82e-08,4;UBERON:0008814,2.44e-07,18;UBERON:0011159,5.08e-07,5 | |||
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| ||
|short_description=p@chr11:58940817..58940826,+ | |short_description=p@chr11:58940817..58940826,+ | ||
}} | }} |
Latest revision as of 23:07, 23 July 2015
Short description: | p@chr11:58940817..58940826, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:58940817..58940826, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.78e-15 | 2 |
epithelial cell of sweat gland | 1.78e-15 | 2 |
epithelial cell of skin gland | 1.78e-15 | 2 |
acinar cell of sebaceous gland | 1.78e-15 | 2 |
epithelial cell of Malassez | 7.42e-11 | 3 |
duct epithelial cell | 9.90e-11 | 3 |
branched duct epithelial cell | 9.90e-11 | 3 |
tracheal epithelial cell | 9.90e-11 | 3 |
tracheoblast | 9.90e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
general ecto-epithelial cell | 4.04e-09 | 14 |
acinar cell | 5.70e-07 | 5 |
extraembryonic cell | 7.18e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.78e-15 | 2 |
epidermis gland | 1.78e-15 | 2 |
gland of integumental system | 1.78e-15 | 2 |
sebaceous gland | 1.78e-15 | 2 |
skin sebaceous gland | 1.78e-15 | 2 |
sweat gland | 1.78e-15 | 2 |
sweat gland placode | 1.78e-15 | 2 |
sebaceous gland placode | 1.78e-15 | 2 |
tongue | 6.73e-11 | 3 |
gustatory system | 6.73e-11 | 3 |
future tongue | 6.73e-11 | 3 |
egg chorion | 1.20e-10 | 3 |
mucosa of oral region | 1.70e-08 | 4 |
respiratory system mucosa | 1.70e-08 | 4 |
jaw skeleton | 1.82e-08 | 4 |
splanchnocranium | 1.82e-08 | 4 |
pharyngeal arch system | 2.44e-07 | 18 |
primary subdivision of cranial skeletal system | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.72e-09 | 14 |