FFCP PHASE1:Hg19::chr2:200298219..200298241,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:200298219..200298241,- | |||
|coexpression_cluster_id=C101 | |coexpression_cluster_id=C101 | ||
|description=CAGE_peak_at_chr2:200298219..200298241,- | |description=CAGE_peak_at_chr2:200298219..200298241,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.74e-12;3 | |ontology_enrichment_celltype_v019=CL:0000322;2.74e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;9.87e-18;2!DOID:3908;6.78e-08;5 | |ontology_enrichment_disease_v019=DOID:3910;9.87e-18;2!DOID:3908;6.78e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.07e-17,2;DOID:3908,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001950!9.68e-25!20;UBERON:0000956!1.15e-22!25;UBERON:0000203!1.15e-22!25;UBERON:0001869!2.05e-22!32;UBERON:0002619!2.57e-22!22;UBERON:0001893!6.64e-21!34;UBERON:0002020!6.74e-21!34;UBERON:0003528!6.74e-21!34;UBERON:0002791!6.00e-19!33;UBERON:0002780!9.34e-17!41;UBERON:0001890!9.34e-17!41;UBERON:0006240!9.34e-17!41;UBERON:0003080!2.83e-16!42;UBERON:0001049!2.93e-14!57;UBERON:0005068!2.93e-14!57;UBERON:0006241!2.93e-14!57;UBERON:0007135!2.93e-14!57;UBERON:0000200!8.20e-14!6;UBERON:0002616!1.23e-13!59;UBERON:0001017!1.95e-12!82;UBERON:0000955!2.49e-12!69;UBERON:0006238!2.49e-12!69;UBERON:0005743!1.22e-11!86;UBERON:0001872!3.07e-11!5;UBERON:0000073!3.18e-11!94;UBERON:0001016!3.18e-11!94;UBERON:0002771!4.97e-11!3;UBERON:0003056!4.09e-10!61;UBERON:0003075!4.26e-08!86;UBERON:0007284!4.26e-08!86;UBERON:0002346!1.45e-07!90;UBERON:0001871!3.36e-07!7;UBERON:0000153!5.16e-07!129;UBERON:0007811!5.16e-07!129;UBERON:0002021!6.23e-07!5 | |ontology_enrichment_uberon=UBERON:0001950!9.68e-25!20;UBERON:0000956!1.15e-22!25;UBERON:0000203!1.15e-22!25;UBERON:0001869!2.05e-22!32;UBERON:0002619!2.57e-22!22;UBERON:0001893!6.64e-21!34;UBERON:0002020!6.74e-21!34;UBERON:0003528!6.74e-21!34;UBERON:0002791!6.00e-19!33;UBERON:0002780!9.34e-17!41;UBERON:0001890!9.34e-17!41;UBERON:0006240!9.34e-17!41;UBERON:0003080!2.83e-16!42;UBERON:0001049!2.93e-14!57;UBERON:0005068!2.93e-14!57;UBERON:0006241!2.93e-14!57;UBERON:0007135!2.93e-14!57;UBERON:0000200!8.20e-14!6;UBERON:0002616!1.23e-13!59;UBERON:0001017!1.95e-12!82;UBERON:0000955!2.49e-12!69;UBERON:0006238!2.49e-12!69;UBERON:0005743!1.22e-11!86;UBERON:0001872!3.07e-11!5;UBERON:0000073!3.18e-11!94;UBERON:0001016!3.18e-11!94;UBERON:0002771!4.97e-11!3;UBERON:0003056!4.09e-10!61;UBERON:0003075!4.26e-08!86;UBERON:0007284!4.26e-08!86;UBERON:0002346!1.45e-07!90;UBERON:0001871!3.36e-07!7;UBERON:0000153!5.16e-07!129;UBERON:0007811!5.16e-07!129;UBERON:0002021!6.23e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.87e-18;2!UBERON:0002173;9.87e-18;2!UBERON:0002186;9.87e-18;2!UBERON:0002114;2.07e-12;2!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0000922;2.41e-10;49!UBERON:0009856;1.50e-09;4!UBERON:0002108;5.73e-08;4!UBERON:0001872;6.13e-08;5!UBERON:0002021;6.78e-08;5!UBERON:0001950;2.82e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0004903;9.87e-18;2!UBERON:0002173;9.87e-18;2!UBERON:0002186;9.87e-18;2!UBERON:0002114;2.07e-12;2!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0000922;2.41e-10;49!UBERON:0009856;1.50e-09;4!UBERON:0002108;5.73e-08;4!UBERON:0001872;6.13e-08;5!UBERON:0002021;6.78e-08;5!UBERON:0001950;2.82e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.07e-17,2;UBERON:0002173,1.07e-17,2;UBERON:0002186,1.07e-17,2;UBERON:0002114,2.07e-12,2;UBERON:0004821,2.89e-12,3;UBERON:0003215,2.89e-12,3;UBERON:0010368,2.89e-12,3;UBERON:0009911,2.89e-12,3;UBERON:0002299,2.89e-12,3;UBERON:0006524,2.89e-12,3;UBERON:0008874,2.89e-12,3;UBERON:0002169,2.89e-12,3;UBERON:0004894,2.89e-12,3;UBERON:0002108,5.73e-08,4;UBERON:0001872,6.13e-08,5;UBERON:0002021,6.55e-08,5;UBERON:0001950,2.77e-07,20;UBERON:0002619,9.95e-07,22 | |||
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| ||
|short_description=p@chr2:200298219..200298241,- | |short_description=p@chr2:200298219..200298241,- | ||
}} | }} |
Latest revision as of 04:46, 29 July 2015
Short description: | p@chr2:200298219..200298241, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:200298219..200298241, - |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.07e-17 | 2 |
alveolar duct | 1.07e-17 | 2 |
bronchiole | 1.07e-17 | 2 |
duodenum | 2.07e-12 | 2 |
pulmonary alveolus epithelium | 2.89e-12 | 3 |
alveolus | 2.89e-12 | 3 |
pulmonary lobule | 2.89e-12 | 3 |
lobule | 2.89e-12 | 3 |
alveolus of lung | 2.89e-12 | 3 |
alveolar system | 2.89e-12 | 3 |
pulmonary acinus | 2.89e-12 | 3 |
alveolar sac | 2.89e-12 | 3 |
alveolar wall | 2.89e-12 | 3 |
small intestine | 5.73e-08 | 4 |
parietal lobe | 6.13e-08 | 5 |
occipital lobe | 6.55e-08 | 5 |
neocortex | 2.77e-07 | 20 |
regional part of cerebral cortex | 9.95e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.07e-17 | 2 |
non-small cell lung carcinoma | 7.01e-08 | 5 |