FFCP PHASE1:Hg19::chr1:109784420..109784424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:109784420..109784424,+ | |||
|description=CAGE_peak_at_chr1:109784420..109784424,+ | |description=CAGE_peak_at_chr1:109784420..109784424,+ | ||
|id=chr1:109784420..109784424,+ | |id=chr1:109784420..109784424,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000167;9.34e-09;1!CL:0000164;9.34e-09;1!CL:0000502;9.34e-09;1!CL:0000172;9.34e-09;1!CL:0000173;9.34e-09;1!CL:0000333;7.68e-07;5 | |ontology_enrichment_celltype_v019=CL:0000167;9.34e-09;1!CL:0000164;9.34e-09;1!CL:0000502;9.34e-09;1!CL:0000172;9.34e-09;1!CL:0000173;9.34e-09;1!CL:0000333;7.68e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.18e-09,1;CL:0000164,7.18e-09,1;CL:0000502,7.18e-09,1;CL:0000172,7.18e-09,1;CL:0000173,7.18e-09,1;CL:0002351,7.18e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;9.34e-09;1 | |ontology_enrichment_development_v019=CL:0002351;9.34e-09;1 | ||
|ontology_enrichment_disease=DOID:162!1.53e-28!235;DOID:14566!1.73e-28!239;DOID:0050687!6.01e-24!143;DOID:305!4.74e-16!106;DOID:0050686!2.39e-11!137;DOID:3095!9.47e-11!22;DOID:2994!9.47e-11!22;DOID:171!3.36e-08!10 | |ontology_enrichment_disease=DOID:162!1.53e-28!235;DOID:14566!1.73e-28!239;DOID:0050687!6.01e-24!143;DOID:305!4.74e-16!106;DOID:0050686!2.39e-11!137;DOID:3095!9.47e-11!22;DOID:2994!9.47e-11!22;DOID:171!3.36e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:171;1.41e-18;10!DOID:3095;8.16e-16;22!DOID:2994;8.16e-16;22!DOID:169;1.08e-11;6!DOID:4960;9.34e-09;1!DOID:0070004;9.34e-09;1!DOID:4430;9.34e-09;1 | |ontology_enrichment_disease_v019=DOID:171;1.41e-18;10!DOID:3095;8.16e-16;22!DOID:2994;8.16e-16;22!DOID:169;1.08e-11;6!DOID:4960;9.34e-09;1!DOID:0070004;9.34e-09;1!DOID:4430;9.34e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.56e-18,10;DOID:3095,5.89e-16,22;DOID:2994,5.89e-16,22;DOID:169,1.10e-11,6;DOID:162,2.79e-11,235;DOID:14566,5.80e-11,239;DOID:0050687,2.45e-10,143;DOID:4430,7.18e-09,1;DOID:4960,8.36e-09,1;DOID:0070004,8.36e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.47e-08;4!UBERON:0000923;1.47e-08;4!UBERON:0010316;1.47e-08;4!UBERON:0005291;1.47e-08;4!UBERON:0002050;5.23e-07;5!UBERON:0005423;5.23e-07;5!UBERON:0000013;7.68e-07;5!UBERON:0002410;7.68e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002346;1.47e-08;4!UBERON:0000923;1.47e-08;4!UBERON:0010316;1.47e-08;4!UBERON:0005291;1.47e-08;4!UBERON:0002050;5.23e-07;5!UBERON:0005423;5.23e-07;5!UBERON:0000013;7.68e-07;5!UBERON:0002410;7.68e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,8.66e-07,5;UBERON:0002410,8.66e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0,0.369754010166788,0.309868802321207,0.995184627411951,0,0,0,0,0,0,0,0.290796477559129,0,0,0.464858073811369,0.411167888021826,0.619412741790207,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,1.86846674698672,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.328875809207352,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,1.90090408889675,0.150575119077773,0,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,0,0.215627574859517,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0.542530047399471,0,0,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.192190067365106,0.510450849978337,0.2023155617111,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,1.23408681925858,0,0.540031437238115,0,0.106824071127473,0.962479855263359,0.490080431962063,0,0.144269212976445,0.355709216742071,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0.321176150207399,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0.307160702099232,0,0.422008249231538,1.11308705022906,0.16480387422676,0.844501632511974,0,0,0,0,0,0,0,0.895105873378046,1.02314474045374,0,0,0,0,0,0,0.520855522170466,0.61221999997337,0,0.341380344856499,0.508507300585533,0,1.72371686620732,0.583209226766509,1.90987494426621,0,0.241192877250816,0,0.110579259931225,0.591095237907095,0,0.32681539055697,4.0432885840795,0,0,0.69169171316418,0.987334088507493,0.325942115766024,0,0,0,1.02193298195737,0,0,0,0,0,1.13852239634511,0.317873157960757,0.421996129056054,0,0,0.649165919226273,0,0,0,0.593042257361244,0.123563938946503,0.522109747527277,0,0,0,0.729819156862664,0.391329237864179,0.485560759068186,0,0,0.30607276163049,0,0.450970258243478,0,0,0.661983911750998,0.313932918407225,1.19472429772959,0.853828638089378,0.693373365065693,0.173559738335131,0.195984794828755,0.261177619741208,0,0.171986032471617,0.0967563312890851,0.511625219603299,0.0821154570532092,0.0969890164884194,0.441280633457501,0.225980740780532,0.137041924646751,0.19871461170299,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0.599428828746391,0,0.343609788497747,1.71594997861965,2.88109595976299,0.49701014226173,0.707082103850386,0,0.523014231561666,1.01998217636322,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0.360299883542404,1.16495949527454,0.157566364614447,0,0.0674035438541849,0.393709926058995,0.254019996197353,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0.211200673038813,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0.106787412567695,0,0,0,0.592834895693833,0,0,0,0,0,0,0.471162288750703,0,0,0,0.573409195690071,0.110929051536852,0,0.553394539744923,0,0.454947352624943,0,0.235265819698172,0,0.434763085832475,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.385239660814607,0.214441591374926,0.521988583930423,0,0.231522474323834,0.244736704506468,0.179088841081487,0.617602894321944,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0.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| ||
|short_description=p@chr1:109784420..109784424,+ | |short_description=p@chr1:109784420..109784424,+ | ||
}} | }} |
Latest revision as of 19:18, 27 July 2015
Short description: | p@chr1:109784420..109784424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:109784420..109784424, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.18e-09 | 1 |
enteroendocrine cell | 7.18e-09 | 1 |
type D enteroendocrine cell | 7.18e-09 | 1 |
somatostatin secreting cell | 7.18e-09 | 1 |
pancreatic D cell | 7.18e-09 | 1 |
progenitor cell of endocrine pancreas | 7.18e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 8.66e-07 | 5 |
autonomic nervous system | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.56e-18 | 10 |
germ cell and embryonal cancer | 5.89e-16 | 22 |
germ cell cancer | 5.89e-16 | 22 |
neuroendocrine tumor | 1.10e-11 | 6 |
cancer | 2.79e-11 | 235 |
disease of cellular proliferation | 5.80e-11 | 239 |
cell type cancer | 2.45e-10 | 143 |
somatostatinoma | 7.18e-09 | 1 |
bone marrow cancer | 8.36e-09 | 1 |
myeloma | 8.36e-09 | 1 |