FFCP PHASE1:Hg19::chr1:20204974..20204981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:20204974..20204981,+ | |||
|description=CAGE_peak_at_chr1:20204974..20204981,+ | |description=CAGE_peak_at_chr1:20204974..20204981,+ | ||
|id=chr1:20204974..20204981,+ | |id=chr1:20204974..20204981,+ | ||
|ontology_enrichment_celltype=CL:0002327!1.49e-08!4 | |ontology_enrichment_celltype=CL:0002327!1.49e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.49e-14;4 | |ontology_enrichment_celltype_v019=CL:0002327;2.49e-14;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.26e-14,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.57e-08;2!UBERON:0010056;6.57e-08;2 | |ontology_enrichment_development_v019=UBERON:0008814;6.57e-08;2!UBERON:0010056;6.57e-08;2 | ||
|ontology_enrichment_disease=DOID:162!1.72e-24!235;DOID:14566!1.82e-24!239;DOID:0050687!2.93e-16!143;DOID:1749!1.78e-15!14;DOID:1036!6.25e-12!8;DOID:305!3.69e-10!106;DOID:0050686!2.09e-07!137;DOID:7!2.57e-07!39;DOID:171!7.96e-07!10 | |ontology_enrichment_disease=DOID:162!1.72e-24!235;DOID:14566!1.82e-24!239;DOID:0050687!2.93e-16!143;DOID:1749!1.78e-15!14;DOID:1036!6.25e-12!8;DOID:305!3.69e-10!106;DOID:0050686!2.09e-07!137;DOID:7!2.57e-07!39;DOID:171!7.96e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.27e-15;8!DOID:1749;3.79e-09;14!DOID:3193;6.57e-08;2!DOID:962;6.57e-08;2 | |ontology_enrichment_disease_v019=DOID:1036;1.27e-15;8!DOID:1749;3.79e-09;14!DOID:3193;6.57e-08;2!DOID:962;6.57e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.41e-15,8;DOID:1749,2.99e-09,14;DOID:3193,5.74e-08,2;DOID:962,5.74e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!7.47e-09!4;UBERON:0004785!7.47e-09!4;UBERON:0001911!1.49e-08!4;UBERON:0005333!1.49e-08!4;UBERON:0008425!1.49e-08!4;UBERON:0005311!1.49e-08!4;UBERON:0003729!4.81e-07!5 | |ontology_enrichment_uberon=UBERON:0003343!7.47e-09!4;UBERON:0004785!7.47e-09!4;UBERON:0001911!1.49e-08!4;UBERON:0005333!1.49e-08!4;UBERON:0008425!1.49e-08!4;UBERON:0005311!1.49e-08!4;UBERON:0003729!4.81e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.49e-14;4!UBERON:0003343;3.85e-14;4!UBERON:0004785;3.85e-14;4!UBERON:0000974;9.67e-10;6!UBERON:0003714;6.57e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0001911;2.49e-14;4!UBERON:0003343;3.85e-14;4!UBERON:0004785;3.85e-14;4!UBERON:0000974;9.67e-10;6!UBERON:0003714;6.57e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,2.11e-14,4;UBERON:0004785,2.11e-14,4;UBERON:0001911,2.26e-14,4;UBERON:0005333,2.26e-14,4;UBERON:0008425,2.26e-14,4;UBERON:0005311,2.26e-14,4;UBERON:0003714,5.74e-08,2;UBERON:0000076,1.23e-07,8 | |||
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| ||
|short_description=p@chr1:20204974..20204981,+ | |short_description=p@chr1:20204974..20204981,+ | ||
}} | }} |
Latest revision as of 02:15, 28 July 2015
Short description: | p@chr1:20204974..20204981, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20204974..20204981, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.26e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 2.11e-14 | 4 |
respiratory system mucosa | 2.11e-14 | 4 |
mammary gland | 2.26e-14 | 4 |
mammary bud | 2.26e-14 | 4 |
mammary ridge | 2.26e-14 | 4 |
mammary placode | 2.26e-14 | 4 |
neural tissue | 5.74e-08 | 2 |
external ectoderm | 1.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.41e-15 | 8 |
squamous cell carcinoma | 2.99e-09 | 14 |
peripheral nerve sheath neoplasm | 5.74e-08 | 2 |
neurofibroma | 5.74e-08 | 2 |