FFCP PHASE1:Hg19::chr2:72374948..72374967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56603 | |EntrezGene=56603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20581 | |HGNC=20581 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2K6,Q9NR63 | |UniProt=B7Z2K6,Q9NR63 | ||
|association_with_transcript=0bp_to_ENST00000546307,NM_019885,uc002sih.1,uc010yrb.1_5end | |association_with_transcript=0bp_to_ENST00000546307,NM_019885,uc002sih.1,uc010yrb.1_5end | ||
|cluster_id=chr2:72374948..72374967,- | |||
|description=CAGE_peak_4_at_CYP26B1_5end | |description=CAGE_peak_4_at_CYP26B1_5end | ||
|id=chr2:72374948..72374967,- | |id=chr2:72374948..72374967,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.48e-14;5!CL:0000349;9.09e-14;19!CL:0002577;1.08e-10;3 | |ontology_enrichment_celltype_v019=CL:0002537;1.48e-14;5!CL:0000349;9.09e-14;19!CL:0002577;1.08e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.49e-14,5;CL:0000349,9.11e-14,19;CL:0002577,1.03e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.65e-11;3 | |ontology_enrichment_development_v019=UBERON:0006215;4.65e-11;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.50e-29!115;UBERON:0001049!1.01e-14!57;UBERON:0005068!1.01e-14!57;UBERON:0006241!1.01e-14!57;UBERON:0007135!1.01e-14!57;UBERON:0002616!8.90e-13!59;UBERON:0002346!1.49e-12!90;UBERON:0000064!1.69e-12!219;UBERON:0000955!2.91e-12!69;UBERON:0006238!2.91e-12!69;UBERON:0001017!1.39e-11!82;UBERON:0000924!2.63e-11!173;UBERON:0006601!2.63e-11!173;UBERON:0005743!2.64e-11!86;UBERON:0002020!8.20e-11!34;UBERON:0003528!8.20e-11!34;UBERON:0001893!1.08e-10!34;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0000073!3.87e-10!94;UBERON:0001016!3.87e-10!94;UBERON:0000153!6.08e-10!129;UBERON:0007811!6.08e-10!129;UBERON:0004121!8.36e-10!169;UBERON:0002791!8.70e-10!33;UBERON:0005631!1.70e-09!14;UBERON:0000158!1.70e-09!14;UBERON:0001869!1.92e-09!32;UBERON:0002619!2.95e-09!22;UBERON:0002780!5.71e-09!41;UBERON:0001890!5.71e-09!41;UBERON:0006240!5.71e-09!41;UBERON:0001950!7.05e-09!20;UBERON:0004733!9.41e-09!12;UBERON:0002028!9.41e-09!12;UBERON:0007277!9.41e-09!12;UBERON:0003080!1.25e-08!42;UBERON:0004923!1.42e-08!57;UBERON:0000033!3.20e-08!123;UBERON:0003076!3.73e-08!15;UBERON:0003057!3.73e-08!15;UBERON:0002298!4.00e-08!8;UBERON:0004732!6.51e-08!13;UBERON:0000956!9.31e-08!25;UBERON:0000203!9.31e-08!25;UBERON:0000062!6.04e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!7.50e-29!115;UBERON:0001049!1.01e-14!57;UBERON:0005068!1.01e-14!57;UBERON:0006241!1.01e-14!57;UBERON:0007135!1.01e-14!57;UBERON:0002616!8.90e-13!59;UBERON:0002346!1.49e-12!90;UBERON:0000064!1.69e-12!219;UBERON:0000955!2.91e-12!69;UBERON:0006238!2.91e-12!69;UBERON:0001017!1.39e-11!82;UBERON:0000924!2.63e-11!173;UBERON:0006601!2.63e-11!173;UBERON:0005743!2.64e-11!86;UBERON:0002020!8.20e-11!34;UBERON:0003528!8.20e-11!34;UBERON:0001893!1.08e-10!34;UBERON:0003075!1.23e-10!86;UBERON:0007284!1.23e-10!86;UBERON:0000073!3.87e-10!94;UBERON:0001016!3.87e-10!94;UBERON:0000153!6.08e-10!129;UBERON:0007811!6.08e-10!129;UBERON:0004121!8.36e-10!169;UBERON:0002791!8.70e-10!33;UBERON:0005631!1.70e-09!14;UBERON:0000158!1.70e-09!14;UBERON:0001869!1.92e-09!32;UBERON:0002619!2.95e-09!22;UBERON:0002780!5.71e-09!41;UBERON:0001890!5.71e-09!41;UBERON:0006240!5.71e-09!41;UBERON:0001950!7.05e-09!20;UBERON:0004733!9.41e-09!12;UBERON:0002028!9.41e-09!12;UBERON:0007277!9.41e-09!12;UBERON:0003080!1.25e-08!42;UBERON:0004923!1.42e-08!57;UBERON:0000033!3.20e-08!123;UBERON:0003076!3.73e-08!15;UBERON:0003057!3.73e-08!15;UBERON:0002298!4.00e-08!8;UBERON:0004732!6.51e-08!13;UBERON:0000956!9.31e-08!25;UBERON:0000203!9.31e-08!25;UBERON:0000062!6.04e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.97e-12;10!UBERON:0000158;1.97e-12;10!UBERON:0000478;8.52e-11;24!UBERON:0000305;1.53e-10;7!UBERON:0002581;1.22e-08;1!UBERON:0007029;1.22e-08;1!UBERON:0002346;1.92e-08;4!UBERON:0000923;1.92e-08;4!UBERON:0010316;1.92e-08;4!UBERON:0005291;1.92e-08;4!UBERON:0001987;3.10e-08;4!UBERON:0002680;3.48e-08;9!UBERON:0001895;3.48e-08;9!UBERON:0002050;6.45e-07;5!UBERON:0005423;6.45e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.97e-12;10!UBERON:0000158;1.97e-12;10!UBERON:0000478;8.52e-11;24!UBERON:0000305;1.53e-10;7!UBERON:0002581;1.22e-08;1!UBERON:0007029;1.22e-08;1!UBERON:0002346;1.92e-08;4!UBERON:0000923;1.92e-08;4!UBERON:0010316;1.92e-08;4!UBERON:0005291;1.92e-08;4!UBERON:0001987;3.10e-08;4!UBERON:0002680;3.48e-08;9!UBERON:0001895;3.48e-08;9!UBERON:0002050;6.45e-07;5!UBERON:0005423;6.45e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.53e-19,14;UBERON:0000158,7.53e-19,14;UBERON:0000478,8.54e-11,24;UBERON:0000305,1.53e-10,7;UBERON:0003124,5.93e-10,7;UBERON:0004871,2.78e-09,8;UBERON:0007029,7.75e-09,1;UBERON:0002581,1.91e-08,1;UBERON:0001987,2.99e-08,4;UBERON:0004340,2.99e-08,4;UBERON:0002680,3.16e-08,9;UBERON:0001895,3.16e-08,9;UBERON:0010092,3.16e-08,9 | |||
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| ||
|short_description=p4@CYP26B1 | |short_description=p4@CYP26B1 | ||
}} | }} |
Latest revision as of 08:25, 18 September 2015
Short description: | p4@CYP26B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYP26B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546307, NM_019885, uc002sih.1, uc010yrb.1_5end |
EntrezGene: | CYP26B1 |
HGNC: | 20581 |
UniProt: | B7Z2K6Q9NR63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.49e-14 | 5 |
extraembryonic cell | 9.11e-14 | 19 |
placental epithelial cell | 1.03e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.53e-19 | 14 |
membranous layer | 7.53e-19 | 14 |
extraembryonic structure | 8.54e-11 | 24 |
amnion | 1.53e-10 | 7 |
chorion | 5.93e-10 | 7 |
somatic layer of lateral plate mesoderm | 2.78e-09 | 8 |
surface | 7.75e-09 | 1 |
postcentral gyrus | 1.91e-08 | 1 |
placenta | 2.99e-08 | 4 |
allantois | 2.99e-08 | 4 |
regional part of metencephalon | 3.16e-08 | 9 |
metencephalon | 3.16e-08 | 9 |
future metencephalon | 3.16e-08 | 9 |