FFCP PHASE1:Hg19::chr13:111805940..111805950,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_BC041861_5end | |association_with_transcript=-16bp_to_BC041861_5end | ||
|cluster_id=chr13:111805940..111805950,- | |||
|description=CAGE_peak_1_at_BC041861_5end | |description=CAGE_peak_1_at_BC041861_5end | ||
|id=chr13:111805940..111805950,- | |id=chr13:111805940..111805950,- | ||
|ontology_enrichment_celltype=CL:0000037!3.38e-09!172;CL:0000566!3.38e-09!172;CL:0000738!4.84e-09!140;CL:0000988!7.60e-09!182;CL:0002031!1.54e-08!124;CL:0002087!4.88e-08!119;CL:0002032!1.34e-07!165;CL:0000837!1.34e-07!165 | |ontology_enrichment_celltype=CL:0000037!3.38e-09!172;CL:0000566!3.38e-09!172;CL:0000738!4.84e-09!140;CL:0000988!7.60e-09!182;CL:0002031!1.54e-08!124;CL:0002087!4.88e-08!119;CL:0002032!1.34e-07!165;CL:0000837!1.34e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000623;4.70e-12;3!CL:0000511;1.15e-09;1!CL:0002625;1.15e-09;1!CL:0000216;1.15e-09;1!CL:0002188;1.40e-07;5 | |ontology_enrichment_celltype_v019=CL:0000623;4.70e-12;3!CL:0000511;1.15e-09;1!CL:0002625;1.15e-09;1!CL:0000216;1.15e-09;1!CL:0002188;1.40e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.90e-12,3;CL:0000825,5.90e-12,3;CL:0000511,5.31e-10,1;CL:0002625,5.31e-10,1;CL:0000216,5.31e-10,1;CL:0002188,1.23e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.90e-10;8!UBERON:0001136;1.15e-09;1!UBERON:0001343;1.15e-09;1!UBERON:0004910;1.15e-09;1!UBERON:0004813;1.15e-09;1!UBERON:0003135;1.37e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.90e-10;8!UBERON:0001136;1.15e-09;1!UBERON:0001343;1.15e-09;1!UBERON:0004910;1.15e-09;1!UBERON:0004813;1.15e-09;1!UBERON:0003135;1.37e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.20e-10,8;UBERON:0001136,5.31e-10,1;UBERON:0001343,5.31e-10,1;UBERON:0004910,5.31e-10,1;UBERON:0005154,5.31e-10,1;UBERON:0005295,5.31e-10,1;UBERON:0004813,5.31e-10,1;UBERON:0005297,5.31e-10,1;UBERON:0005294,5.31e-10,1;UBERON:0010141,5.31e-10,1;UBERON:0005891,5.31e-10,1;UBERON:0003135,1.12e-07,11;UBERON:0004876,1.79e-07,11 | |||
|phase1_expression=0,0,0,0,0.893922188854576,0.872338524100369,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0.626909442956176,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.246301768349837,0.157421562627358,0.393364276848904,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0.0774672005803016,0,0.880801318004542,0.553995408531877,1.00272223735071,0.868043482863407,0,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0.47296445977717,1.03423704220986,0,1.35426486594342,0.376484679085209,0,0.449446968890169,0.918251677112708,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0.736555271975129,0.632924774881769,0,0.212604299965044,0.419317291016752,0.44931452458598,0.300353785683013,0.48217676009124,1.14005097496499,0.59675003159727,0.730656615058536,0,1.09227722252426,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,1.05353633910031,0,0,0,0,0.32592226663359,0.473447805734733,1.94826728407911,0.111410456885174,0.294605907474837,0.886135578334485,0.541607727530031,0.384273959177026,0.130059347559878,0.328875809207352,0,0.289803085735052,0.889719378972363,1.60524496853828,0,0.113309342697566,0.766440987203842,0.68725489096526,0,0,0,0.950452044448374,0.752875595388864,0.255973222308837,0,0.236777252044017,2.46338399076314,0.604820229674197,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,1.57174890597255,0,0.370784442784429,0,0,0,0.715471872916026,1.14398982156026,0,0,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0,0,0,0,0.485618833104395,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0,0,0,0.257640540045629,0.18611685633159,0.675105328965065,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.435758888184812,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,1.1240175325762,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.6312121671319,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,1.07813787429759,1.28343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0.413536052245775,0.431428401637234,0.320182673410333,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0.784349769176855,0,0,1.13733384070897,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0.831076008928724,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,1.6068392984416,0.193341436584244,0,0.460511024178389,0,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0,0.699869440489966,0.0962221127255121,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0.577076851905779,0.0711418433484141,0.478278818186467,0.199579371432817,0.191505370132367,0.211673582723883,0,0.561594356226918,0,0.156679895773023,0,0,0.1605880751037,0.605399121573143,0,0,0.614481528616916,0,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0.659215496907038,0,0.597743964753209,0,0,0.102268682502155,0.369254416383208,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.689486746482929,0,0,0,0.120596438625408,0,0.884634079449797,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.470940769185074,0.332423363800313,0,0.588187602953219,0,0,0.158936578980379,0.210998064528027,0,0,0.432777279484182,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0.91227394607833,0,0,0,1.20990716048664,0,0.189559738885464,0.300646838828985,0.103688191397247,0.664653872707185,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0,0.292357268344742,0,0,0.176512253383001,0,0,0,0.0633107959558787,0.391102765469606,0,0,0.19980960958213,0,0.572682980829578,0.686379991447858,0.288109595976299,0.372757606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| ||
|short_description=p1@BC041861 | |short_description=p1@BC041861 | ||
}} | }} |
Latest revision as of 14:37, 24 July 2015
Short description: | p1@BC041861 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC041861_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_BC041861_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.90e-12 | 3 |
pro-NK cell | 5.90e-12 | 3 |
androgen binding protein secreting cell | 5.31e-10 | 1 |
seminiferous tubule epithelial cell | 5.31e-10 | 1 |
Sertoli cell | 5.31e-10 | 1 |
glomerular endothelial cell | 1.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.20e-10 | 8 |
mesothelium | 5.31e-10 | 1 |
seminiferous tubule of testis | 5.31e-10 | 1 |
epithelium of male gonad | 5.31e-10 | 1 |
epithelial cord | 5.31e-10 | 1 |
sex cord | 5.31e-10 | 1 |
seminiferous tubule epithelium | 5.31e-10 | 1 |
testis sex cord | 5.31e-10 | 1 |
genital ridge | 5.31e-10 | 1 |
primitive sex cord of indifferent gonad | 5.31e-10 | 1 |
coelomic epithelium | 5.31e-10 | 1 |
male reproductive organ | 1.12e-07 | 11 |
urogenital ridge | 1.79e-07 | 11 |