FFCP PHASE1:Hg19::chr6:107436524..107436543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57673 | |EntrezGene=57673 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23040 | |HGNC=23040 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T5X7 | |UniProt=Q5T5X7 | ||
|association_with_transcript=-51bp_to_ENST00000369042_5end | |association_with_transcript=-51bp_to_ENST00000369042_5end | ||
|cluster_id=chr6:107436524..107436543,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_5_at_BEND3_5end | |description=CAGE_peak_5_at_BEND3_5end | ||
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|ontology_enrichment_celltype=CL:0000066!4.40e-10!254;CL:0000133!1.34e-08!59;CL:0000221!1.19e-07!71;CL:0000540!3.57e-07!6;CL:0000031!3.57e-07!6;CL:0000404!3.57e-07!6;CL:0000039!5.10e-07!7;CL:0000586!5.10e-07!7;CL:0002322!6.52e-07!5 | |ontology_enrichment_celltype=CL:0000066!4.40e-10!254;CL:0000133!1.34e-08!59;CL:0000221!1.19e-07!71;CL:0000540!3.57e-07!6;CL:0000031!3.57e-07!6;CL:0000404!3.57e-07!6;CL:0000039!5.10e-07!7;CL:0000586!5.10e-07!7;CL:0002322!6.52e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.84e-39;5!CL:0000148;2.09e-19;10!CL:0000147;7.96e-14;14!CL:0002321;5.93e-13;15!CL:0000540;3.60e-12;6!CL:0000404;3.60e-12;6!CL:0002567;2.64e-11;3!CL:0000039;1.24e-10;7!CL:0000586;1.24e-10;7!CL:0000710;1.26e-09;20!CL:0000075;4.49e-07;27 | |ontology_enrichment_celltype_v019=CL:0002322;4.84e-39;5!CL:0000148;2.09e-19;10!CL:0000147;7.96e-14;14!CL:0002321;5.93e-13;15!CL:0000540;3.60e-12;6!CL:0000404;3.60e-12;6!CL:0002567;2.64e-11;3!CL:0000039;1.24e-10;7!CL:0000586;1.24e-10;7!CL:0000710;1.26e-09;20!CL:0000075;4.49e-07;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.89e-39,5;CL:0000148,2.06e-19,10;CL:0000541,2.06e-19,10;CL:0000147,7.86e-14,14;CL:0000540,3.03e-12,6;CL:0000031,3.03e-12,6;CL:0000404,3.03e-12,6;CL:0002567,3.60e-11,3;CL:0000039,1.30e-10,7;CL:0000586,1.30e-10,7;CL:0000710,1.25e-09,20;CL:0000047,2.61e-09,8;CL:0000133,5.91e-09,59;CL:0000221,3.81e-07,72;CL:0000075,4.46e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.67e-13;10!UBERON:0005564;8.67e-13;10!CL:0000031;3.60e-12;6 | |ontology_enrichment_development_v019=UBERON:0009117;8.67e-13;10!UBERON:0005564;8.67e-13;10!CL:0000031;3.60e-12;6 | ||
|ontology_enrichment_disease=DOID:162!2.25e-15!235;DOID:14566!7.12e-15!239;DOID:0050687!3.45e-13!143;DOID:305!7.98e-13!106;DOID:3095!1.74e-07!22;DOID:2994!1.74e-07!22 | |ontology_enrichment_disease=DOID:162!2.25e-15!235;DOID:14566!7.12e-15!239;DOID:0050687!3.45e-13!143;DOID:305!7.98e-13!106;DOID:3095!1.74e-07!22;DOID:2994!1.74e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;8.50e-09;22!DOID:2994;8.50e-09;22 | |ontology_enrichment_disease_v019=DOID:3095;8.50e-09;22!DOID:2994;8.50e-09;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,8.87e-09,22;DOID:2994,8.87e-09,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.65e-11;49!UBERON:0000473;2.29e-09;8!UBERON:0003135;6.19e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000922;8.65e-11;49!UBERON:0000473;2.29e-09;8!UBERON:0003135;6.19e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.39e-09,8;UBERON:0003135,6.38e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,1.82960559194393,7.1566074893602,3.48581828608555,1.86589899027667,4.28945446488568,4.74470566798579,1.56449532329816,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,1.32438929824395,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,3.4214489204541,0.205654985406647,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.447749509444357,0.219259876645935,0,0.256450125116389,0.656029291399411,0,0.206082023295445,0.640986253728404,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.557409525377156,0.721346064882224,0.213425530045242,0.318852545457645,0,0,0,0.973865820823666,0,0,0.47003968731907,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.390776190804081,0.556812347790485,0,0.540911356951966,0.66614393599564,0,0,0,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0.922255617552241,0.179515288819544,0.108647371922008,0,0,0,0,0.156980256395025,0,0.225595660617181,0.588187602953219,0,0.37950746544837,0,0,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.547364367646998,0,0,0,0,0.61214552326098,0,0.300646838828985,0.622129148383483,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0,0.347119476670262,0.195984794828755,0.174118413160805,0,0,0.19351266257817,0,0,0,0.529536760149002,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0.432271251462318,0,0.514784993585894,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,1.16495949527454,0.787831823072237,0.576911008668165,0.26961417541674,0.688992370603241,0,0,0,1.60753148465019,2.06309154895851,2.9080823662043,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.276697269872462,0.249960815924213,0.151649117541648,0,0.235265819698172,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0.38582807654183,0,0,1.38172136692479,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0.511577485214607,0.539124056983409,0,0.764467467344097,0,0,0.495743057036009,0,0,0.23658523500376,0.80057074828547,0,0,0,0,0,0,1.26035848110859,0,0,0,0.0981477185010256,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0.785720083444267,0,0.295712172434091,0,0,0,0,2.7348740450911,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0.2944507008457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| ||
|short_description=p5@BEND3 | |short_description=p5@BEND3 | ||
}} | }} |
Latest revision as of 16:16, 19 September 2015
Short description: | p5@BEND3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BEND3_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -51bp_to_ENST00000369042_5end |
EntrezGene: | BEND3 |
HGNC: | 23040 |
UniProt: | Q5T5X7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.89e-39 | 5 |
melanocyte | 2.06e-19 | 10 |
melanoblast | 2.06e-19 | 10 |
pigment cell | 7.86e-14 | 14 |
neuron | 3.03e-12 | 6 |
neuroblast | 3.03e-12 | 6 |
electrically signaling cell | 3.03e-12 | 6 |
light melanocyte | 3.60e-11 | 3 |
germ line cell | 1.30e-10 | 7 |
germ cell | 1.30e-10 | 7 |
neurecto-epithelial cell | 1.25e-09 | 20 |
neuronal stem cell | 2.61e-09 | 8 |
neurectodermal cell | 5.91e-09 | 59 |
ectodermal cell | 3.81e-07 | 72 |
columnar/cuboidal epithelial cell | 4.46e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
testis | 2.39e-09 | 8 |
male reproductive organ | 6.38e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 8.87e-09 | 22 |
germ cell cancer | 8.87e-09 | 22 |