FFCP PHASE1:Hg19::chr5:115782150..115782161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:115782150..115782161,- | |||
|coexpression_cluster_id=C1950 | |coexpression_cluster_id=C1950 | ||
|description=CAGE_peak_at_chr5:115782150..115782161,- | |description=CAGE_peak_at_chr5:115782150..115782161,- | ||
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|ontology_enrichment_celltype=CL:0000148!9.70e-14!10;CL:0000541!9.70e-14!10;CL:0000540!9.04e-11!6;CL:0000031!9.04e-11!6;CL:0000404!9.04e-11!6;CL:0000047!9.85e-11!8;CL:0002322!2.19e-10!5;CL:0000147!3.63e-09!14;CL:0000710!2.96e-08!20;CL:0000133!1.48e-07!59 | |ontology_enrichment_celltype=CL:0000148!9.70e-14!10;CL:0000541!9.70e-14!10;CL:0000540!9.04e-11!6;CL:0000031!9.04e-11!6;CL:0000404!9.04e-11!6;CL:0000047!9.85e-11!8;CL:0002322!2.19e-10!5;CL:0000147!3.63e-09!14;CL:0000710!2.96e-08!20;CL:0000133!1.48e-07!59 | ||
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|ontology_enrichment_celltype_v019_2=CL:0002322,1.09e-50,5;CL:0000148,5.46e-25,10;CL:0000541,5.46e-25,10;CL:0000147,7.59e-18,14;CL:0000710,1.80e-12,20;CL:0000047,8.30e-12,8;CL:0000313,6.00e-11,1;CL:0000133,1.51e-09,59;CL:0000075,3.31e-09,27;CL:0000221,1.06e-07,72;CL:0000540,1.52e-07,6;CL:0000031,1.52e-07,6;CL:0000404,1.52e-07,6;CL:0002077,2.80e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.23e-09;10!UBERON:0005564;1.23e-09;10!CL:0000031;1.52e-07;6 | |ontology_enrichment_development_v019=UBERON:0009117;1.23e-09;10!UBERON:0005564;1.23e-09;10!CL:0000031;1.52e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;2.81e-11;1 | |ontology_enrichment_disease_v019=DOID:2152;2.81e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,6.00e-11,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002038;2.81e-11;1!UBERON:0004911;2.81e-11;1!UBERON:0009661;2.81e-11;1!UBERON:0002950;2.81e-11;1!UBERON:0001891;2.81e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0002038;2.81e-11;1!UBERON:0004911;2.81e-11;1!UBERON:0009661;2.81e-11;1!UBERON:0002950;2.81e-11;1!UBERON:0001891;2.81e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.01e-11,1;UBERON:0009661,4.01e-11,1;UBERON:0002950,4.01e-11,1;UBERON:0001891,4.01e-11,1;UBERON:0009616,4.01e-11,1;UBERON:0010286,4.01e-11,1;UBERON:0004911,6.00e-11,1 | |||
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| ||
|short_description=p@chr5:115782150..115782161,- | |short_description=p@chr5:115782150..115782161,- | ||
}} | }} |
Latest revision as of 08:55, 30 July 2015
Short description: | p@chr5:115782150..115782161, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:115782150..115782161, - |
Coexpression cluster: | C1950_testicular_H9_teratocarcinoma_Neural_iPS_small_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.09e-50 | 5 |
melanocyte | 5.46e-25 | 10 |
melanoblast | 5.46e-25 | 10 |
pigment cell | 7.59e-18 | 14 |
neurecto-epithelial cell | 1.80e-12 | 20 |
neuronal stem cell | 8.30e-12 | 8 |
serous secreting cell | 6.00e-11 | 1 |
neurectodermal cell | 1.51e-09 | 59 |
columnar/cuboidal epithelial cell | 3.31e-09 | 27 |
ectodermal cell | 1.06e-07 | 72 |
neuron | 1.52e-07 | 6 |
neuroblast | 1.52e-07 | 6 |
electrically signaling cell | 1.52e-07 | 6 |
ecto-epithelial cell | 2.80e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.01e-11 | 1 |
midbrain nucleus | 4.01e-11 | 1 |
regional part of midbrain | 4.01e-11 | 1 |
midbrain | 4.01e-11 | 1 |
presumptive midbrain | 4.01e-11 | 1 |
midbrain neural tube | 4.01e-11 | 1 |
epithelium of female gonad | 6.00e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.00e-11 | 1 |