FFCP PHASE1:Hg19::chr18:61495529..61495546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:61495529..61495546,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr18:61495529..61495546,+ | |description=CAGE_peak_at_chr18:61495529..61495546,+ | ||
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|ontology_enrichment_celltype=CL:0002620!1.66e-15!23;CL:0002504!2.94e-12!3;CL:1000279!2.94e-12!3;CL:1000280!2.94e-12!3;CL:0000057!2.36e-07!75;CL:0000135!9.35e-07!3;CL:0000386!9.35e-07!3;CL:0000388!9.35e-07!3 | |ontology_enrichment_celltype=CL:0002620!1.66e-15!23;CL:0002504!2.94e-12!3;CL:1000279!2.94e-12!3;CL:1000280!2.94e-12!3;CL:0000057!2.36e-07!75;CL:0000135!9.35e-07!3;CL:0000386!9.35e-07!3;CL:0000388!9.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000135;3.86e-38;3!CL:0000388;3.86e-38;3!CL:0002574;3.16e-29;1!CL:0000499;1.31e-16;28 | |ontology_enrichment_celltype_v019=CL:0000135;3.86e-38;3!CL:0000388;3.86e-38;3!CL:0002574;3.16e-29;1!CL:0000499;1.31e-16;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.19e-38,3;CL:0000388,3.19e-38,3;CL:0002574,4.20e-29,1;CL:0000499,1.31e-16,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1!DOID:6193;9.99e-30;1!DOID:3350;1.33e-15;2!DOID:3307;1.78e-15;2 | |ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1!DOID:6193;9.99e-30;1!DOID:3350;1.33e-15;2!DOID:3307;1.78e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1;DOID:6193,9.99e-30,1;DOID:3350,1.33e-15,2;DOID:3307,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.39e-12!40;UBERON:0002199!2.22e-10!45;UBERON:0002416!2.22e-10!45;UBERON:0001155!5.88e-07!9;UBERON:0000043!9.35e-07!3 | |ontology_enrichment_uberon=UBERON:0002097!5.39e-12!40;UBERON:0002199!2.22e-10!45;UBERON:0002416!2.22e-10!45;UBERON:0001155!5.88e-07!9;UBERON:0000043!9.35e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.86e-38;3!UBERON:0000043;3.86e-38;3!UBERON:0007845;3.86e-38;3!UBERON:0007029;1.33e-29;1!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3!UBERON:0000014;1.96e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0007846;3.86e-38;3!UBERON:0000043;3.86e-38;3!UBERON:0007845;3.86e-38;3!UBERON:0007029;1.33e-29;1!UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3!UBERON:0000014;1.96e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.19e-38,3;UBERON:0000043,3.19e-38,3;UBERON:0007845,3.19e-38,3;UBERON:0007029,1.33e-29,1;UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3;UBERON:0000014,1.96e-08,4 | |||
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| ||
|short_description=p@chr18:61495529..61495546,+ | |short_description=p@chr18:61495529..61495546,+ | ||
}} | }} |
Latest revision as of 01:52, 26 July 2015
Short description: | p@chr18:61495529..61495546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:61495529..61495546, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.19e-38 | 3 |
tendon cell | 3.19e-38 | 3 |
stromal cell of pancreas | 4.20e-29 | 1 |
stromal cell | 1.31e-16 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.19e-38 | 3 |
tendon | 3.19e-38 | 3 |
regular connective tissue | 3.19e-38 | 3 |
surface | 1.33e-29 | 1 |
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
zone of skin | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |
epithelioid sarcoma | 9.99e-30 | 1 |
mesenchymal cell neoplasm | 1.33e-15 | 2 |
teratoma | 1.78e-15 | 2 |