FFCP PHASE1:Hg19::chr2:25264933..25264987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22979 | |EntrezGene=22979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29155 | |HGNC=29155 | ||
|TSSclassifier=strong | |||
|UniProt=B3KT90,Q9Y2G0 | |UniProt=B3KT90,Q9Y2G0 | ||
|association_with_transcript=0bp_to_NM_014971,uc002rfw.2,uc010eyh.2_5end | |association_with_transcript=0bp_to_NM_014971,uc002rfw.2,uc010eyh.2_5end | ||
|cluster_id=chr2:25264933..25264987,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_EFR3B_5end | |description=CAGE_peak_1_at_EFR3B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000133!1.21e-07!59 | |ontology_enrichment_celltype=CL:0000133!1.21e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.62e-08;14!CL:0002319;8.79e-08;25!CL:0000148;3.77e-07;10 | |ontology_enrichment_celltype_v019=CL:0000147;1.62e-08;14!CL:0002319;8.79e-08;25!CL:0000148;3.77e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.52e-09,59;CL:0000147,1.00e-08,14;CL:0002319,9.11e-08,25;CL:0000148,2.74e-07,10;CL:0000541,2.74e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.73e-12;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.73e-12;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;3.39e-26;53!UBERON:0002616;3.39e-26;53!UBERON:0001893;4.73e-26;34!UBERON:0003528;5.64e-26;34!UBERON:0002020;5.64e-26;34!UBERON:0001869;8.90e-26;32!UBERON:0002791;1.14e-25;32!UBERON:0002780;1.25e-25;41!UBERON:0001890;1.25e-25;41!UBERON:0000956;7.59e-22;25!UBERON:0000203;7.59e-22;25!UBERON:0002619;1.11e-19;22!UBERON:0000955;1.41e-19;68!UBERON:0001017;4.42e-19;75!UBERON:0001950;7.41e-18;20!UBERON:0001016;1.12e-17;83!UBERON:0004732;1.34e-11;13!UBERON:0004733;7.76e-11;12!UBERON:0002028;7.76e-11;12!UBERON:0002420;8.58e-10;9!UBERON:0007245;8.58e-10;9!UBERON:0010009;8.58e-10;9!UBERON:0010011;8.58e-10;9!UBERON:0000454;8.58e-10;9!UBERON:0000125;9.10e-10;9!UBERON:0002308;9.10e-10;9!UBERON:0007023;1.87e-08;114!UBERON:0002680;2.27e-08;9!UBERON:0001895;2.27e-08;9!UBERON:0000922;2.65e-08;49!UBERON:0009663;5.71e-08;7!UBERON:0001894;5.02e-07;7!UBERON:0002298;7.10e-07;6!UBERON:0000200;9.73e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000073;3.39e-26;53!UBERON:0002616;3.39e-26;53!UBERON:0001893;4.73e-26;34!UBERON:0003528;5.64e-26;34!UBERON:0002020;5.64e-26;34!UBERON:0001869;8.90e-26;32!UBERON:0002791;1.14e-25;32!UBERON:0002780;1.25e-25;41!UBERON:0001890;1.25e-25;41!UBERON:0000956;7.59e-22;25!UBERON:0000203;7.59e-22;25!UBERON:0002619;1.11e-19;22!UBERON:0000955;1.41e-19;68!UBERON:0001017;4.42e-19;75!UBERON:0001950;7.41e-18;20!UBERON:0001016;1.12e-17;83!UBERON:0004732;1.34e-11;13!UBERON:0004733;7.76e-11;12!UBERON:0002028;7.76e-11;12!UBERON:0002420;8.58e-10;9!UBERON:0007245;8.58e-10;9!UBERON:0010009;8.58e-10;9!UBERON:0010011;8.58e-10;9!UBERON:0000454;8.58e-10;9!UBERON:0000125;9.10e-10;9!UBERON:0002308;9.10e-10;9!UBERON:0007023;1.87e-08;114!UBERON:0002680;2.27e-08;9!UBERON:0001895;2.27e-08;9!UBERON:0000922;2.65e-08;49!UBERON:0009663;5.71e-08;7!UBERON:0001894;5.02e-07;7!UBERON:0002298;7.10e-07;6!UBERON:0000200;9.73e-07;6 | ||
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|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,0,0,0,0,0,0.783556884599516,0.982935746006035,2.09340350391728,0,0,0,0,0,0,1.46062018077475,0.975865597581014,5.17108443922509,2.04000691244253,3.76145665773705,12.8806194208976,16.2880565836732,13.1819771574543,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0,0,0,0,0,0.309868802321207,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0.639337125799041,0,0.797854630486527,0,0.290209238628584,1.13477044938228,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0.255725123687061,0,1.00267582127178,0.144846518960824,2.3858578411533,1.45990461090791,6.05022829850034,6.43015252641436,5.88493064143945,10.6093051153147,0,0.370784442784429,0,0,0.797747763113191,0,0,0.371457501329565,0,0.860234595106124,0.347140501607594,1.69592382577203,0.838998872419812,0,0.417989933073621,1.03366703667732,0.35576626268671,0.33472061276467,0.805658634218294,0.760272105718513,2.19655851793353,0,0.81014194788176,0.17859945656816,1.12264686313085,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0,0.269421344139376,0.163461903113459,1.66493170409425,1.15235184896,0.234321431833797,0,0,0,0.587172493218824,0.161872944368132,0.561803226808994,0,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.113432183160021,1.07633781413317,0,0.211931901159562,0.900273288253207,0.309157587715317,0.257640540045629,0.18611685633159,1.85653965465393,0.68205903612839,0,0,0.161646056818812,0,1.0075209822764,0.67824236924195,0,0.272746120590835,0,3.41526377162867,3.97589304964456,2.78865462886844,5.18305275076852,1.7662459561294,7.2995471815166,0,0,0,0,0,1.77460200059766,1.51726221070292,1.20505514941741,0.992645754591546,0.871517776369625,1.18635309555548,2.69662616320329,2.15843611637881,1.15424147083917,0.738155454624648,0,1.2347220339942,0,0,0,2.95394953340702,0.882926198829301,1.47586126251736,1.71567810298526,0,0,0,0,0.325808305310325,1.03993478527958,2.88662684050547,9.97001482785661,0.70445216541493,0.577465791044295,0.462985512576611,0.380508304469197,5.53143078571493,8.58486162094873,0.246217006087397,0.702012795417713,1.93220510975347,0.93733833986777,0,0.283550194484773,0,0,0,0,0.176096868026452,5.59785911960085,2.01767934783746,4.79721247020244,8.76270941231933,9.16772221339866,12.8939191931052,6.84289784090821,5.14137463516618,9.01029173531752,16.0062802273124,0.112131084345361,0,0.07333828582095,0.775630294546667,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,3.31583314765545,5.22920075160176,3.499054691372,1.2162378064119,0,0,0,0,0,0.289562613335158,0,1.25342674267927,0,0.197030760201927,0,0.128343036279748,15.2456774533478,46.8503473887438,10.05275456611,36.015997046885,15.3105300396759,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0.587403472388222,1.37257369524342,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0.462629081407967,0.177561725313127,0.9033987161519,0,0.464841513839837,0.846016147141356,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0.451199612907412,0.847168708148562,3.13739907670742,0,1.05551628892876,0,0.340187410553031,0.215915916102139,0,0.541892875087706,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,6.92415337814251,3.28014645699706,1.30151357865721,0.9273691048295,1.92295876118521,1.32015199872941,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.511359764496605,3.56128142586949,0,0,0,0,0,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,1.05650146756755,0.136499911407986,0,1.13008116620243,2.2054613741845,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,1.07001315444375,0,0,0,1.13841952129715,1.04980416073495,0,0,0,0.847294206991012,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,9.62479855263359,0,0,0.432807638929335,0.213425530045242,3.50737800003409,0,0.383010740264733,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0.976940477010201,0,0,0.270455678475983,1.33228787199128,0,0.18714054040822,1.31857361344705,17.3545546101804,0,2.2730891744513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| ||
|short_description=p1@EFR3B | |short_description=p1@EFR3B | ||
}} | }} |
Latest revision as of 13:26, 16 September 2015
Short description: | p1@EFR3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFR3B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_014971, uc002rfw.2, uc010eyh.2_5end |
EntrezGene: | EFR3B |
HGNC: | 29155 |
UniProt: | B3KT90Q9Y2G0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.52e-09 | 59 |
pigment cell | 1.00e-08 | 14 |
neural cell | 9.11e-08 | 25 |
melanocyte | 2.74e-07 | 10 |
melanoblast | 2.74e-07 | 10 |