FFCP PHASE1:Hg19::chr14:29047235..29047244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:29047235..29047244,+ | |||
|coexpression_cluster_id=C3420 | |coexpression_cluster_id=C3420 | ||
|description=CAGE_peak_at_chr14:29047235..29047244,+ | |description=CAGE_peak_at_chr14:29047235..29047244,+ | ||
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|ontology_enrichment_celltype=CL:0000322!3.41e-08!3;CL:0000708!1.20e-07!3;CL:0000055!2.18e-07!180 | |ontology_enrichment_celltype=CL:0000322!3.41e-08!3;CL:0000708!1.20e-07!3;CL:0000055!2.18e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.95e-27;3!CL:0000082;4.17e-10;19!CL:0002202;7.91e-10;9!CL:0002632;7.91e-10;9!CL:0002573;7.02e-08;2!CL:0002368;4.45e-07;13 | |ontology_enrichment_celltype_v019=CL:0000322;1.95e-27;3!CL:0000082;4.17e-10;19!CL:0002202;7.91e-10;9!CL:0002632;7.91e-10;9!CL:0002573;7.02e-08;2!CL:0002368;4.45e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.59e-27,3;CL:0000082,4.04e-10,19;CL:0002202,7.41e-10,9;CL:0002632,7.41e-10,9;CL:0002573,5.93e-08,2;CL:0002368,4.26e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.57e-11;30!UBERON:0008947;8.09e-07;29 | |ontology_enrichment_development_v019=UBERON:0001041;5.57e-11;30!UBERON:0008947;8.09e-07;29 | ||
|ontology_enrichment_disease=DOID:3908!3.59e-12!5;DOID:4556!1.88e-07!3 | |ontology_enrichment_disease=DOID:3908!3.59e-12!5;DOID:4556!1.88e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.49e-40;2!DOID:3908;2.26e-36;5!DOID:3111;5.71e-21;1!DOID:5662;5.71e-21;1!DOID:3603;5.71e-21;1!DOID:3905;1.42e-20;9!DOID:1324;1.25e-12;15!DOID:1325;2.31e-12;7!DOID:3904;2.31e-12;7!DOID:0050615;6.99e-12;16!DOID:4929;1.82e-11;2!DOID:4556;5.36e-08;3 | |ontology_enrichment_disease_v019=DOID:3910;1.49e-40;2!DOID:3908;2.26e-36;5!DOID:3111;5.71e-21;1!DOID:5662;5.71e-21;1!DOID:3603;5.71e-21;1!DOID:3905;1.42e-20;9!DOID:1324;1.25e-12;15!DOID:1325;2.31e-12;7!DOID:3904;2.31e-12;7!DOID:0050615;6.99e-12;16!DOID:4929;1.82e-11;2!DOID:4556;5.36e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.10e-40,2;DOID:3908,2.00e-36,5;DOID:3111,7.72e-21,1;DOID:3603,7.72e-21,1;DOID:5662,9.43e-21,1;DOID:3905,1.33e-20,9;DOID:1324,1.20e-12,15;DOID:1325,2.12e-12,7;DOID:3904,2.12e-12,7;DOID:0050615,6.73e-12,16;DOID:4929,1.82e-11,2;DOID:305,5.90e-09,106;DOID:4556,5.54e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004821!3.41e-08!3;UBERON:0003215!3.41e-08!3;UBERON:0002299!3.41e-08!3;UBERON:0006524!3.41e-08!3;UBERON:0008874!3.41e-08!3;UBERON:0002169!3.41e-08!3;UBERON:0004894!3.41e-08!3;UBERON:0003210!1.20e-07!3 | |ontology_enrichment_uberon=UBERON:0004821!3.41e-08!3;UBERON:0003215!3.41e-08!3;UBERON:0002299!3.41e-08!3;UBERON:0006524!3.41e-08!3;UBERON:0008874!3.41e-08!3;UBERON:0002169!3.41e-08!3;UBERON:0004894!3.41e-08!3;UBERON:0003210!1.20e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.49e-40;2!UBERON:0002173;1.49e-40;2!UBERON:0002186;1.49e-40;2!UBERON:0004821;1.95e-27;3!UBERON:0007499;1.95e-27;3!UBERON:0003215;1.95e-27;3!UBERON:0010368;1.95e-27;3!UBERON:0009911;1.95e-27;3!UBERON:0002299;1.95e-27;3!UBERON:0006524;1.95e-27;3!UBERON:0008874;1.95e-27;3!UBERON:0002169;1.95e-27;3!UBERON:0004894;1.95e-27;3!UBERON:0004913;1.53e-21;1!UBERON:0003703;1.53e-21;1!UBERON:0001174;1.53e-21;1!UBERON:0004914;1.53e-21;1!UBERON:0007195;5.71e-21;1!UBERON:0009856;7.36e-21;4!UBERON:0000058;1.17e-18;10!UBERON:0004802;4.17e-10;19!UBERON:0000115;4.17e-10;19!UBERON:0002048;8.25e-09;22!UBERON:0004807;8.25e-09;22!UBERON:0000117;8.25e-09;22!UBERON:0000171;8.25e-09;22!UBERON:0000170;8.25e-09;22!UBERON:0002114;4.52e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.49e-40;2!UBERON:0002173;1.49e-40;2!UBERON:0002186;1.49e-40;2!UBERON:0004821;1.95e-27;3!UBERON:0007499;1.95e-27;3!UBERON:0003215;1.95e-27;3!UBERON:0010368;1.95e-27;3!UBERON:0009911;1.95e-27;3!UBERON:0002299;1.95e-27;3!UBERON:0006524;1.95e-27;3!UBERON:0008874;1.95e-27;3!UBERON:0002169;1.95e-27;3!UBERON:0004894;1.95e-27;3!UBERON:0004913;1.53e-21;1!UBERON:0003703;1.53e-21;1!UBERON:0001174;1.53e-21;1!UBERON:0004914;1.53e-21;1!UBERON:0007195;5.71e-21;1!UBERON:0009856;7.36e-21;4!UBERON:0000058;1.17e-18;10!UBERON:0004802;4.17e-10;19!UBERON:0000115;4.17e-10;19!UBERON:0002048;8.25e-09;22!UBERON:0004807;8.25e-09;22!UBERON:0000117;8.25e-09;22!UBERON:0000171;8.25e-09;22!UBERON:0000170;8.25e-09;22!UBERON:0002114;4.52e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.10e-40,2;UBERON:0002173,1.10e-40,2;UBERON:0002186,1.10e-40,2;UBERON:0004821,1.59e-27,3;UBERON:0003215,1.59e-27,3;UBERON:0010368,1.59e-27,3;UBERON:0009911,1.59e-27,3;UBERON:0002299,1.59e-27,3;UBERON:0006524,1.59e-27,3;UBERON:0008874,1.59e-27,3;UBERON:0002169,1.59e-27,3;UBERON:0004894,1.59e-27,3;UBERON:0004913,1.53e-21,1;UBERON:0003703,1.53e-21,1;UBERON:0001174,1.53e-21,1;UBERON:0004914,1.53e-21,1;UBERON:0007195,6.31e-21,1;UBERON:0007499,4.02e-13,25;UBERON:0009856,1.24e-12,26;UBERON:0000058,3.68e-10,19;UBERON:0004802,4.04e-10,19;UBERON:0000115,4.04e-10,19;UBERON:0002048,8.03e-09,22;UBERON:0000117,8.03e-09,22;UBERON:0000171,8.03e-09,22;UBERON:0000170,8.03e-09,22;UBERON:0005597,8.03e-09,22;UBERON:0000118,8.03e-09,22;UBERON:0005911,1.11e-08,82;UBERON:0002114,4.52e-08,2;UBERON:0004807,4.73e-07,28 | |||
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| ||
|short_description=p@chr14:29047235..29047244,+ | |short_description=p@chr14:29047235..29047244,+ | ||
}} | }} |
Latest revision as of 20:02, 24 July 2015
Short description: | p@chr14:29047235..29047244, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:29047235..29047244, + |
Coexpression cluster: | C3420_papillotubular_alveolar_anaplastic_large_prostate_pleomorphic_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.59e-27 | 3 |
epithelial cell of lung | 4.04e-10 | 19 |
epithelial cell of tracheobronchial tree | 7.41e-10 | 9 |
epithelial cell of lower respiratory tract | 7.41e-10 | 9 |
Schwann cell | 5.93e-08 | 2 |
respiratory epithelial cell | 4.26e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.10e-40 | 2 |
alveolar duct | 1.10e-40 | 2 |
bronchiole | 1.10e-40 | 2 |
pulmonary alveolus epithelium | 1.59e-27 | 3 |
alveolus | 1.59e-27 | 3 |
pulmonary lobule | 1.59e-27 | 3 |
lobule | 1.59e-27 | 3 |
alveolus of lung | 1.59e-27 | 3 |
alveolar system | 1.59e-27 | 3 |
pulmonary acinus | 1.59e-27 | 3 |
alveolar sac | 1.59e-27 | 3 |
alveolar wall | 1.59e-27 | 3 |
hepatopancreatic ampulla | 1.53e-21 | 1 |
extrahepatic bile duct | 1.53e-21 | 1 |
common bile duct | 1.53e-21 | 1 |
duodenal papilla | 1.53e-21 | 1 |
stroma of bone marrow | 6.31e-21 | 1 |
epithelial sac | 4.02e-13 | 25 |
sac | 1.24e-12 | 26 |
duct | 3.68e-10 | 19 |
respiratory tract epithelium | 4.04e-10 | 19 |
lung epithelium | 4.04e-10 | 19 |
lung | 8.03e-09 | 22 |
respiratory tube | 8.03e-09 | 22 |
respiration organ | 8.03e-09 | 22 |
pair of lungs | 8.03e-09 | 22 |
lung primordium | 8.03e-09 | 22 |
lung bud | 8.03e-09 | 22 |
endo-epithelium | 1.11e-08 | 82 |
duodenum | 4.52e-08 | 2 |
respiratory system epithelium | 4.73e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.10e-40 | 2 |
non-small cell lung carcinoma | 2.00e-36 | 5 |
cystadenocarcinoma | 7.72e-21 | 1 |
mucinous cystadenocarcinoma | 7.72e-21 | 1 |
pleomorphic carcinoma | 9.43e-21 | 1 |
lung carcinoma | 1.33e-20 | 9 |
lung cancer | 1.20e-12 | 15 |
bronchus cancer | 2.12e-12 | 7 |
bronchogenic carcinoma | 2.12e-12 | 7 |
respiratory system cancer | 6.73e-12 | 16 |
tubular adenocarcinoma | 1.82e-11 | 2 |
carcinoma | 5.90e-09 | 106 |
lung large cell carcinoma | 5.54e-08 | 3 |