FFCP PHASE1:Hg19::chr10:78900431..78900445,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:78900431..78900445,- | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_at_chr10:78900431..78900445,- | |description=CAGE_peak_at_chr10:78900431..78900445,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.09e-14;3 | |ontology_enrichment_development_v019=UBERON:0003056;2.09e-14;3 | ||
|ontology_enrichment_disease=DOID:2355!2.25e-19!1;DOID:74!2.27e-10!2 | |ontology_enrichment_disease=DOID:2355!2.25e-19!1;DOID:74!2.27e-10!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.30e-37!2;UBERON:0002757!1.30e-37!2;UBERON:0010134!1.30e-37!2;UBERON:0002784!1.30e-37!2;UBERON:0005408!1.30e-37!2;UBERON:0001899!1.30e-37!2;UBERON:0003296!2.26e-19!4;UBERON:0010133!2.26e-19!4;UBERON:0002038!3.91e-19!1;UBERON:0009661!3.91e-19!1;UBERON:0001894!1.68e-11!7;UBERON:0006222!1.68e-11!7;UBERON:0002360!2.72e-10!2;UBERON:0000094!2.72e-10!2;UBERON:0007645!2.72e-10!2;UBERON:0002950!2.99e-10!2;UBERON:0001891!2.99e-10!2;UBERON:0009616!2.99e-10!2;UBERON:0005743!9.84e-10!86;UBERON:0000073!8.53e-09!94;UBERON:0001016!8.53e-09!94;UBERON:0001017!1.38e-07!82;UBERON:0003075!2.42e-07!86;UBERON:0007284!2.42e-07!86;UBERON:0002240!2.63e-07!3;UBERON:0006331!2.97e-07!3;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3;UBERON:0002346!5.21e-07!90 | |ontology_enrichment_uberon=UBERON:0001905!1.30e-37!2;UBERON:0002757!1.30e-37!2;UBERON:0010134!1.30e-37!2;UBERON:0002784!1.30e-37!2;UBERON:0005408!1.30e-37!2;UBERON:0001899!1.30e-37!2;UBERON:0003296!2.26e-19!4;UBERON:0010133!2.26e-19!4;UBERON:0002038!3.91e-19!1;UBERON:0009661!3.91e-19!1;UBERON:0001894!1.68e-11!7;UBERON:0006222!1.68e-11!7;UBERON:0002360!2.72e-10!2;UBERON:0000094!2.72e-10!2;UBERON:0007645!2.72e-10!2;UBERON:0002950!2.99e-10!2;UBERON:0001891!2.99e-10!2;UBERON:0009616!2.99e-10!2;UBERON:0005743!9.84e-10!86;UBERON:0000073!8.53e-09!94;UBERON:0001016!8.53e-09!94;UBERON:0001017!1.38e-07!82;UBERON:0003075!2.42e-07!86;UBERON:0007284!2.42e-07!86;UBERON:0002240!2.63e-07!3;UBERON:0006331!2.97e-07!3;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3;UBERON:0002346!5.21e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0000966;3.49e-09;5!UBERON:0005388;3.49e-09;5!UBERON:0001802;3.49e-09;5!UBERON:0000970;6.69e-09;20!UBERON:0002104;1.59e-08;21!UBERON:0000020;7.23e-08;23!UBERON:0001032;1.40e-07;24!UBERON:0004456;1.40e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0001894;1.02e-23;7!UBERON:0000966;3.49e-09;5!UBERON:0005388;3.49e-09;5!UBERON:0001802;3.49e-09;5!UBERON:0000970;6.69e-09;20!UBERON:0002104;1.59e-08;21!UBERON:0000020;7.23e-08;23!UBERON:0001032;1.40e-07;24!UBERON:0004456;1.40e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000970,1.59e-08,21;UBERON:0002104,1.59e-08,21;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0000020,1.40e-07,24;UBERON:0001032,1.40e-07,24;UBERON:0004456,1.40e-07,24 | |||
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|short_description=p@chr10:78900431..78900445,- | |short_description=p@chr10:78900431..78900445,- | ||
}} | }} |
Latest revision as of 15:46, 23 July 2015
Short description: | p@chr10:78900431..78900445, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:78900431..78900445, - |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
eye | 1.59e-08 | 21 |
visual system | 1.59e-08 | 21 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
sense organ | 1.40e-07 | 24 |
sensory system | 1.40e-07 | 24 |
entire sense organ system | 1.40e-07 | 24 |