FFCP PHASE1:Hg19::chr11:31832207..31832226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=0bp_to_ENST00000379109,uc001mtd.3_5end | |association_with_transcript=0bp_to_ENST00000379109,uc001mtd.3_5end | ||
|cluster_id=chr11:31832207..31832226,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_12_at_PAX6_5end | |description=CAGE_peak_12_at_PAX6_5end | ||
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|ontology_enrichment_celltype=CL:0000128!1.25e-11!7;CL:0000126!1.25e-11!7;CL:0000127!1.25e-11!7;CL:0002453!1.25e-11!7;CL:0000133!1.07e-08!59;CL:0002319!1.24e-08!25;CL:0000095!5.06e-08!17;CL:0000123!5.06e-08!17;CL:0000221!5.70e-07!71 | |ontology_enrichment_celltype=CL:0000128!1.25e-11!7;CL:0000126!1.25e-11!7;CL:0000127!1.25e-11!7;CL:0002453!1.25e-11!7;CL:0000133!1.07e-08!59;CL:0002319!1.24e-08!25;CL:0000095!5.06e-08!17;CL:0000123!5.06e-08!17;CL:0000221!5.70e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.14e-29;3!CL:0000067;5.14e-29;3!CL:0005012;5.14e-29;3!CL:0002304;5.14e-29;3!CL:0000075;3.04e-12;27!CL:0000342;7.43e-11;1!CL:0002565;7.43e-11;1!CL:0000306;1.86e-10;4!CL:0002222;1.86e-10;4!CL:0002224;1.86e-10;4!CL:0000710;8.24e-08;20 | |ontology_enrichment_celltype_v019=CL:0000064;5.14e-29;3!CL:0000067;5.14e-29;3!CL:0005012;5.14e-29;3!CL:0002304;5.14e-29;3!CL:0000075;3.04e-12;27!CL:0000342;7.43e-11;1!CL:0002565;7.43e-11;1!CL:0000306;1.86e-10;4!CL:0002222;1.86e-10;4!CL:0002224;1.86e-10;4!CL:0000710;8.24e-08;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.98e-29,3;CL:0000067,1.98e-29,3;CL:0005012,1.98e-29,3;CL:0002304,1.98e-29,3;CL:0000075,2.70e-12,27;CL:0000342,1.77e-10,1;CL:0002565,1.77e-10,1;CL:0000306,2.25e-10,4;CL:0002222,2.25e-10,4;CL:0002224,2.25e-10,4;CL:0000710,6.89e-08,20;CL:0000133,5.87e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!3.63e-11!143;DOID:305!1.05e-07!106;DOID:162!1.28e-07!235;DOID:14566!1.41e-07!239 | |ontology_enrichment_disease=DOID:0050687!3.63e-11!143;DOID:305!1.05e-07!106;DOID:162!1.28e-07!235;DOID:14566!1.41e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:154;5.91e-20;2!DOID:4236;5.91e-20;2 | |ontology_enrichment_disease_v019=DOID:154;5.91e-20;2!DOID:4236;5.91e-20;2 | ||
|ontology_enrichment_disease_v019_2=DOID:154,9.60e-20,2;DOID:4236,9.60e-20,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000488;4.51e-38;4!UBERON:0007625;1.46e-30;11!UBERON:0001778;5.14e-29;3!UBERON:0001775;5.14e-29;3!UBERON:0002203;1.64e-25;6!UBERON:0001768;1.64e-25;6!UBERON:0002200;1.64e-25;6!UBERON:0001801;5.94e-24;14!UBERON:0000019;1.46e-17;19!UBERON:0000047;1.46e-17;19!UBERON:0004088;1.46e-17;19!UBERON:0010230;1.46e-17;19!UBERON:0000970;1.15e-16;20!UBERON:0002104;7.46e-16;21!UBERON:0001456;7.46e-16;21!UBERON:0000020;1.92e-14;23!UBERON:0006876;4.76e-14;11!UBERON:0001032;7.98e-14;24!UBERON:0004456;7.98e-14;24!UBERON:0002506;7.43e-11;1!UBERON:0001769;7.43e-11;1!UBERON:0010371;1.17e-10;31!UBERON:0010077;1.86e-10;4!UBERON:0005389;1.86e-10;4!UBERON:0000484;1.86e-10;4!UBERON:0000965;1.86e-10;4!UBERON:0001803;1.86e-10;4 | |ontology_enrichment_uberon_v019=UBERON:0000488;4.51e-38;4!UBERON:0007625;1.46e-30;11!UBERON:0001778;5.14e-29;3!UBERON:0001775;5.14e-29;3!UBERON:0002203;1.64e-25;6!UBERON:0001768;1.64e-25;6!UBERON:0002200;1.64e-25;6!UBERON:0001801;5.94e-24;14!UBERON:0000019;1.46e-17;19!UBERON:0000047;1.46e-17;19!UBERON:0004088;1.46e-17;19!UBERON:0010230;1.46e-17;19!UBERON:0000970;1.15e-16;20!UBERON:0002104;7.46e-16;21!UBERON:0001456;7.46e-16;21!UBERON:0000020;1.92e-14;23!UBERON:0006876;4.76e-14;11!UBERON:0001032;7.98e-14;24!UBERON:0004456;7.98e-14;24!UBERON:0002506;7.43e-11;1!UBERON:0001769;7.43e-11;1!UBERON:0010371;1.17e-10;31!UBERON:0010077;1.86e-10;4!UBERON:0005389;1.86e-10;4!UBERON:0000484;1.86e-10;4!UBERON:0000965;1.86e-10;4!UBERON:0001803;1.86e-10;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,4.15e-38,4;UBERON:0007625,1.72e-30,11;UBERON:0001778,1.98e-29,3;UBERON:0001775,1.98e-29,3;UBERON:0002203,1.55e-25,6;UBERON:0001768,1.55e-25,6;UBERON:0002200,1.55e-25,6;UBERON:0001801,6.75e-24,14;UBERON:0000019,1.26e-16,20;UBERON:0000047,1.26e-16,20;UBERON:0010312,1.26e-16,20;UBERON:0004088,1.26e-16,20;UBERON:0010230,1.26e-16,20;UBERON:0003072,1.26e-16,20;UBERON:0004128,1.26e-16,20;UBERON:0003071,1.26e-16,20;UBERON:0000970,8.11e-16,21;UBERON:0002104,8.11e-16,21;UBERON:0001456,4.42e-15,22;UBERON:0006876,4.62e-14,11;UBERON:0000020,8.59e-14,24;UBERON:0001032,8.59e-14,24;UBERON:0004456,8.59e-14,24;UBERON:0003075,4.18e-12,82;UBERON:0007284,4.18e-12,82;UBERON:0002346,1.80e-11,86;UBERON:0005085,1.38e-10,31;UBERON:0002506,1.77e-10,1;UBERON:0001769,1.77e-10,1;UBERON:0010077,2.25e-10,4;UBERON:0005389,2.25e-10,4;UBERON:0000484,2.25e-10,4;UBERON:0002546,2.25e-10,4;UBERON:0000965,2.25e-10,4;UBERON:0001803,2.25e-10,4;UBERON:0003073,2.25e-10,4;UBERON:0005426,2.25e-10,4;UBERON:0010371,3.24e-09,104;UBERON:0003056,8.68e-09,61;UBERON:0010314,2.28e-08,132 | |||
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|short_description=p12@PAX6 | |short_description=p12@PAX6 | ||
}} | }} |
Latest revision as of 14:54, 17 September 2015
Short description: | p12@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PAX6_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 0bp_to_ENST00000379109, uc001mtd.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.98e-29 | 3 |
ciliated epithelial cell | 1.98e-29 | 3 |
multi-ciliated epithelial cell | 1.98e-29 | 3 |
non-pigmented ciliary epithelial cell | 1.98e-29 | 3 |
columnar/cuboidal epithelial cell | 2.70e-12 | 27 |
pigment cell (sensu Vertebrata) | 1.77e-10 | 1 |
iris pigment epithelial cell | 1.77e-10 | 1 |
crystallin accumulating cell | 2.25e-10 | 4 |
vertebrate lens cell | 2.25e-10 | 4 |
lens epithelial cell | 2.25e-10 | 4 |
neurecto-epithelial cell | 6.89e-08 | 20 |
neurectodermal cell | 5.87e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.60e-20 | 2 |
carcinosarcoma | 9.60e-20 | 2 |