FFCP PHASE1:Hg19::chr20:45980635..45980649,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:45980635..45980649,-
|short_description=p17@ZMYND8
|description=CAGE_peak_17_at_ZMYND8_5end
|association_with_transcript=-14bp_to_ENST00000446894_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23613 | |EntrezGene=23613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9397 | |HGNC=9397 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TH08 | |UniProt=Q5TH08 | ||
|association_with_transcript=-14bp_to_ENST00000446894_5end | |||
|cluster_id=chr20:45980635..45980649,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_17_at_ZMYND8_5end | |||
|id=chr20:45980635..45980649,- | |||
|ontology_enrichment_celltype=CL:0000840!1.55e-07!5;CL:0001029!1.55e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.04e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.66e-11;1!DOID:4549;2.66e-11;1!DOID:5861;2.66e-11;1!DOID:6496;2.66e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.79e-11,1;DOID:4549,2.79e-11,1;DOID:5861,2.79e-11,1;DOID:6496,2.79e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-33!57;UBERON:0005068!1.87e-33!57;UBERON:0006241!1.87e-33!57;UBERON:0007135!1.87e-33!57;UBERON:0005743!1.26e-32!86;UBERON:0001893!9.14e-32!34;UBERON:0000955!9.55e-32!69;UBERON:0006238!9.55e-32!69;UBERON:0002616!1.12e-31!59;UBERON:0002020!1.70e-31!34;UBERON:0003528!1.70e-31!34;UBERON:0001017!2.42e-31!82;UBERON:0002791!4.42e-30!33;UBERON:0003075!5.68e-30!86;UBERON:0007284!5.68e-30!86;UBERON:0002346!1.90e-29!90;UBERON:0007023!3.15e-29!115;UBERON:0001869!4.86e-29!32;UBERON:0000073!3.13e-28!94;UBERON:0001016!3.13e-28!94;UBERON:0002780!2.99e-27!41;UBERON:0001890!2.99e-27!41;UBERON:0006240!2.99e-27!41;UBERON:0000033!6.81e-27!123;UBERON:0003080!2.10e-26!42;UBERON:0000153!6.40e-25!129;UBERON:0007811!6.40e-25!129;UBERON:0002619!6.78e-25!22;UBERON:0000956!1.43e-23!25;UBERON:0000203!1.43e-23!25;UBERON:0003056!6.31e-23!61;UBERON:0000924!7.45e-23!173;UBERON:0006601!7.45e-23!173;UBERON:0004121!7.81e-23!169;UBERON:0001950!4.35e-22!20;UBERON:0001872!8.49e-11!5;UBERON:0000477!5.51e-10!286;UBERON:0004111!6.15e-10!241;UBERON:0002308!2.62e-09!9;UBERON:0000125!2.62e-09!9;UBERON:0001871!4.25e-09!7;UBERON:0000200!6.05e-09!6;UBERON:0004733!2.32e-08!12;UBERON:0002028!2.32e-08!12;UBERON:0007277!2.32e-08!12;UBERON:0003076!3.41e-08!15;UBERON:0003057!3.41e-08!15;UBERON:0000025!8.49e-08!194;UBERON:0002298!1.24e-07!8;UBERON:0004732!1.36e-07!13;UBERON:0002420!3.11e-07!9;UBERON:0007245!3.11e-07!9;UBERON:0010009!3.11e-07!9;UBERON:0010011!3.11e-07!9;UBERON:0000454!3.11e-07!9;UBERON:0002771!3.53e-07!3;UBERON:0000064!5.31e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.18e-99;20!UBERON:0002619;3.18e-90;22!UBERON:0000956;1.42e-79;25!UBERON:0000203;1.42e-79;25!UBERON:0001869;7.73e-69;32!UBERON:0001893;3.97e-68;34!UBERON:0002791;8.54e-60;32!UBERON:0003528;3.98e-58;34!UBERON:0002020;3.98e-58;34!UBERON:0001872;8.88e-48;5!UBERON:0002780;1.50e-40;41!UBERON:0001890;1.50e-40;41!UBERON:0000200;5.23e-40;6!UBERON:0000073;9.23e-34;53!UBERON:0002616;9.23e-34;53!UBERON:0001871;2.95e-22;6!UBERON:0002771;1.86e-20;2!UBERON:0001017;6.45e-19;75!UBERON:0000955;9.19e-18;68!UBERON:0002021;1.17e-17;5!UBERON:0001016;1.61e-16;83!UBERON:0001870;1.93e-13;3!UBERON:0002581;4.14e-11;1!UBERON:0002902;4.14e-11;1!UBERON:0009899;4.14e-11;1!UBERON:0007190;4.14e-11;1!UBERON:0001882;1.05e-10;1!UBERON:0002022;1.05e-10;1!UBERON:0005403;1.05e-10;1!UBERON:0007023;5.99e-09;114!UBERON:0000349;2.00e-08;5!UBERON:0011216;1.23e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.92e-99,20;UBERON:0002619,1.28e-90,22;UBERON:0001869,1.74e-80,32;UBERON:0000956,6.37e-80,25;UBERON:0000203,6.37e-80,25;UBERON:0001893,9.35e-76,34;UBERON:0002791,4.22e-71,32;UBERON:0003528,6.55e-67,34;UBERON:0002020,6.55e-67,34;UBERON:0002780,9.71e-63,41;UBERON:0001890,9.71e-63,41;UBERON:0003080,9.71e-63,41;UBERON:0006240,9.71e-63,41;UBERON:0000073,1.38e-60,53;UBERON:0002616,1.38e-60,53;UBERON:0001049,2.88e-57,56;UBERON:0005068,2.88e-57,56;UBERON:0006241,2.88e-57,56;UBERON:0007135,2.88e-57,56;UBERON:0000955,2.89e-51,68;UBERON:0006238,2.89e-51,68;UBERON:0001872,9.36e-48,5;UBERON:0001017,7.91e-43,81;UBERON:0003056,1.01e-41,61;UBERON:0000200,3.65e-40,6;UBERON:0003075,1.60e-38,82;UBERON:0007284,1.60e-38,82;UBERON:0001016,2.22e-38,89;UBERON:0002346,1.25e-36,86;UBERON:0010371,6.76e-30,104;UBERON:0007023,2.72e-24,114;UBERON:0010314,4.95e-23,132;UBERON:0001871,2.87e-22,6;UBERON:0002771,1.69e-20,2;UBERON:0004121,5.39e-19,171;UBERON:0000924,5.39e-19,171;UBERON:0006601,5.39e-19,171;UBERON:0002021,5.91e-18,5;UBERON:0000025,5.33e-15,192;UBERON:0011216,6.93e-14,223;UBERON:0001870,1.60e-13,3;UBERON:0004111,1.96e-11,240;UBERON:0002902,3.08e-11,1;UBERON:0009899,3.08e-11,1;UBERON:0002581,3.41e-11,1;UBERON:0007190,5.57e-11,1;UBERON:0002022,1.10e-10,1;UBERON:0001882,1.61e-10,1;UBERON:0005403,1.61e-10,1;UBERON:0000349,2.33e-08,5;UBERON:0000483,2.47e-08,306;UBERON:0000119,3.18e-08,309 | |||
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| ||
|short_description=p17@ZMYND8 | |||
}} | }} |
Latest revision as of 15:41, 16 September 2015
Short description: | p17@ZMYND8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ZMYND8_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -14bp_to_ENST00000446894_5end |
EntrezGene: | ZMYND8 |
HGNC: | 9397 |
UniProt: | Q5TH08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.79e-11 | 1 |
extraosseous chondrosarcoma | 2.79e-11 | 1 |
myxoid chondrosarcoma | 2.79e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 2.79e-11 | 1 |