FFCP PHASE1:Hg19::chr20:25388293..25388372,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9837 | |EntrezGene=9837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28980 | |HGNC=28980 | ||
|TSSclassifier=strong | |||
|UniProt=Q14691,E7EQ95 | |UniProt=Q14691,E7EQ95 | ||
|association_with_transcript=0bp_to_ENST00000262460,ENST00000429262,ENST00000484893,NM_021067,uc002wuv.1,uc010zte.1_5end | |association_with_transcript=0bp_to_ENST00000262460,ENST00000429262,ENST00000484893,NM_021067,uc002wuv.1,uc010zte.1_5end | ||
|cluster_id=chr20:25388293..25388372,+ | |||
|coexpression_cluster_id=C281 | |coexpression_cluster_id=C281 | ||
|description=CAGE_peak_1_at_GINS1_5end | |description=CAGE_peak_1_at_GINS1_5end | ||
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|ontology_enrichment_celltype=CL:0000066!8.83e-26!254;CL:0000548!1.24e-11!679;CL:0000004!1.24e-11!679;CL:0000255!1.24e-11!679;CL:0000012!1.75e-11!682;CL:0002321!1.23e-10!248;CL:0000220!5.33e-10!246;CL:0002319!1.98e-07!25;CL:0000333!5.79e-07!41 | |ontology_enrichment_celltype=CL:0000066!8.83e-26!254;CL:0000548!1.24e-11!679;CL:0000004!1.24e-11!679;CL:0000255!1.24e-11!679;CL:0000012!1.75e-11!682;CL:0002321!1.23e-10!248;CL:0000220!5.33e-10!246;CL:0002319!1.98e-07!25;CL:0000333!5.79e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.76e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;1.76e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.07e-26,253;CL:0002321,2.13e-10,250;CL:0002319,1.80e-07,25;CL:0000333,7.48e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.42e-50!235;DOID:14566!1.28e-48!239;DOID:0050687!9.51e-28!143;DOID:0050686!1.09e-23!137;DOID:305!4.93e-23!106;DOID:2531!3.69e-17!51;DOID:0060083!3.69e-17!51;DOID:1240!2.99e-14!39;DOID:8692!6.17e-11!31;DOID:7!8.57e-07!39 | |ontology_enrichment_disease=DOID:162!4.42e-50!235;DOID:14566!1.28e-48!239;DOID:0050687!9.51e-28!143;DOID:0050686!1.09e-23!137;DOID:305!4.93e-23!106;DOID:2531!3.69e-17!51;DOID:0060083!3.69e-17!51;DOID:1240!2.99e-14!39;DOID:8692!6.17e-11!31;DOID:7!8.57e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.89e-11;39!DOID:2531;5.95e-11;51!DOID:0060083;5.95e-11;51!DOID:8692;1.22e-10;31!DOID:0050687;1.13e-07;143!DOID:305;1.95e-07;106 | |ontology_enrichment_disease_v019=DOID:1240;1.89e-11;39!DOID:2531;5.95e-11;51!DOID:0060083;5.95e-11;51!DOID:8692;1.22e-10;31!DOID:0050687;1.13e-07;143!DOID:305;1.95e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:162,3.04e-50,235;DOID:14566,8.96e-49,239;DOID:0050687,8.66e-28,143;DOID:0050686,1.34e-23,137;DOID:305,4.43e-23,106;DOID:2531,2.86e-17,51;DOID:0060083,2.86e-17,51;DOID:1240,2.43e-14,39;DOID:8692,5.29e-11,31;DOID:7,7.99e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@GINS1 | |short_description=p1@GINS1 | ||
}} | }} |
Latest revision as of 22:56, 24 September 2015
Short description: | p1@GINS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GINS1_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000262460, ENST00000429262, ENST00000484893, NM_021067, uc002wuv.1, uc010zte.1_5end |
EntrezGene: | GINS1 |
HGNC: | 28980 |
UniProt: | Q14691E7EQ95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.07e-26 | 253 |
embryonic cell | 2.13e-10 | 250 |
neural cell | 1.80e-07 | 25 |
migratory neural crest cell | 7.48e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.04e-50 | 235 |
disease of cellular proliferation | 8.96e-49 | 239 |
cell type cancer | 8.66e-28 | 143 |
organ system cancer | 1.34e-23 | 137 |
carcinoma | 4.43e-23 | 106 |
hematologic cancer | 2.86e-17 | 51 |
immune system cancer | 2.86e-17 | 51 |
leukemia | 2.43e-14 | 39 |
myeloid leukemia | 5.29e-11 | 31 |
disease of anatomical entity | 7.99e-07 | 39 |