FFCP PHASE1:Hg19::chr6:4725115..4725120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:4725115..4725120,- | |||
|coexpression_cluster_id=C2711 | |coexpression_cluster_id=C2711 | ||
|description=CAGE_peak_at_chr6:4725115..4725120,- | |description=CAGE_peak_at_chr6:4725115..4725120,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000764!9.52e-09!2;CL:0000765!9.52e-09!2;CL:0000050!9.52e-09!2;CL:0000038!9.52e-09!2;CL:0000558!9.52e-09!2;CL:0000547!9.52e-09!2;CL:0000549!9.52e-09!2;CL:0000550!9.52e-09!2;CL:0000552!9.52e-09!2;CL:0001014!9.89e-09!2;CL:0001016!9.89e-09!2;CL:0000039!2.13e-08!7;CL:0000586!2.13e-08!7;CL:0000453!2.87e-07!5 | |ontology_enrichment_celltype=CL:0000764!9.52e-09!2;CL:0000765!9.52e-09!2;CL:0000050!9.52e-09!2;CL:0000038!9.52e-09!2;CL:0000558!9.52e-09!2;CL:0000547!9.52e-09!2;CL:0000549!9.52e-09!2;CL:0000550!9.52e-09!2;CL:0000552!9.52e-09!2;CL:0001014!9.89e-09!2;CL:0001016!9.89e-09!2;CL:0000039!2.13e-08!7;CL:0000586!2.13e-08!7;CL:0000453!2.87e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.43e-12;2!CL:0000558;3.43e-12;2!CL:0000322;9.66e-09;3 | |ontology_enrichment_celltype_v019=CL:0000764;3.43e-12;2!CL:0000558;3.43e-12;2!CL:0000322;9.66e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.62e-12,2;CL:0000765,3.62e-12,2;CL:0000050,3.62e-12,2;CL:0000038,3.62e-12,2;CL:0000558,3.62e-12,2;CL:0000547,3.62e-12,2;CL:0000549,3.62e-12,2;CL:0000550,3.62e-12,2;CL:0000552,3.62e-12,2;CL:0000322,9.66e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.09e-10;10!UBERON:0005564;8.09e-10;10!UBERON:0003918;8.64e-10;10!UBERON:0007687;8.64e-10;10 | |ontology_enrichment_development_v019=UBERON:0009117;8.09e-10;10!UBERON:0005564;8.09e-10;10!UBERON:0003918;8.64e-10;10!UBERON:0007687;8.64e-10;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;1.07e-23;1!DOID:3350;1.48e-12;2!DOID:3910;1.85e-12;2 | |ontology_enrichment_disease_v019=DOID:6193;1.07e-23;1!DOID:3350;1.48e-12;2!DOID:3910;1.85e-12;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,1.07e-23,1;DOID:3350,1.48e-12,2;DOID:3910,1.85e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.22e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!1.22e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.85e-12;2!UBERON:0002173;1.85e-12;2!UBERON:0002186;1.85e-12;2!UBERON:0000473;4.94e-12;8!UBERON:0003135;5.20e-09;11!UBERON:0004821;9.66e-09;3!UBERON:0007499;9.66e-09;3!UBERON:0003215;9.66e-09;3!UBERON:0010368;9.66e-09;3!UBERON:0009911;9.66e-09;3!UBERON:0002299;9.66e-09;3!UBERON:0006524;9.66e-09;3!UBERON:0008874;9.66e-09;3!UBERON:0002169;9.66e-09;3!UBERON:0004894;9.66e-09;3!UBERON:0009856;7.27e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.85e-12;2!UBERON:0002173;1.85e-12;2!UBERON:0002186;1.85e-12;2!UBERON:0000473;4.94e-12;8!UBERON:0003135;5.20e-09;11!UBERON:0004821;9.66e-09;3!UBERON:0007499;9.66e-09;3!UBERON:0003215;9.66e-09;3!UBERON:0010368;9.66e-09;3!UBERON:0009911;9.66e-09;3!UBERON:0002299;9.66e-09;3!UBERON:0006524;9.66e-09;3!UBERON:0008874;9.66e-09;3!UBERON:0002169;9.66e-09;3!UBERON:0004894;9.66e-09;3!UBERON:0009856;7.27e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.85e-12,2;UBERON:0002173,1.85e-12,2;UBERON:0002186,1.85e-12,2;UBERON:0000473,4.94e-12,8;UBERON:0003135,5.20e-09,11;UBERON:0004821,9.66e-09,3;UBERON:0003215,9.66e-09,3;UBERON:0010368,9.66e-09,3;UBERON:0009911,9.66e-09,3;UBERON:0002299,9.66e-09,3;UBERON:0006524,9.66e-09,3;UBERON:0008874,9.66e-09,3;UBERON:0002169,9.66e-09,3;UBERON:0004894,9.66e-09,3 | |||
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| ||
|short_description=p@chr6:4725115..4725120,- | |short_description=p@chr6:4725115..4725120,- | ||
}} | }} |
Latest revision as of 02:11, 31 July 2015
Short description: | p@chr6:4725115..4725120, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:4725115..4725120, - |
Coexpression cluster: | C2711_embryonic_epithelioid_bronchioalveolar_testis_small_Smooth_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.62e-12 | 2 |
erythroblast | 3.62e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 3.62e-12 | 2 |
erythroid progenitor cell | 3.62e-12 | 2 |
reticulocyte | 3.62e-12 | 2 |
proerythroblast | 3.62e-12 | 2 |
basophilic erythroblast | 3.62e-12 | 2 |
polychromatophilic erythroblast | 3.62e-12 | 2 |
orthochromatic erythroblast | 3.62e-12 | 2 |
pneumocyte | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.85e-12 | 2 |
alveolar duct | 1.85e-12 | 2 |
bronchiole | 1.85e-12 | 2 |
testis | 4.94e-12 | 8 |
male reproductive organ | 5.20e-09 | 11 |
pulmonary alveolus epithelium | 9.66e-09 | 3 |
alveolus | 9.66e-09 | 3 |
pulmonary lobule | 9.66e-09 | 3 |
lobule | 9.66e-09 | 3 |
alveolus of lung | 9.66e-09 | 3 |
alveolar system | 9.66e-09 | 3 |
pulmonary acinus | 9.66e-09 | 3 |
alveolar sac | 9.66e-09 | 3 |
alveolar wall | 9.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.07e-23 | 1 |
mesenchymal cell neoplasm | 1.48e-12 | 2 |
lung adenocarcinoma | 1.85e-12 | 2 |