FFCP PHASE1:Hg19::chr1:203151934..203151947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000404436_5end | |association_with_transcript=-1bp_to_ENST00000404436_5end | ||
|cluster_id=chr1:203151934..203151947,- | |||
|coexpression_cluster_id=C283 | |coexpression_cluster_id=C283 | ||
|description=CAGE_peak_7_at_CHI3L1_5end | |description=CAGE_peak_7_at_CHI3L1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000153!1.46e-14!9;CL:0000447!1.46e-14!9;CL:0000667!1.04e-11!6;CL:0000058!1.04e-11!6;CL:0000138!1.04e-11!6;CL:0000499!6.55e-10!27;CL:0000135!3.09e-09!3;CL:0000386!3.09e-09!3;CL:0000388!3.09e-09!3;CL:0000327!6.81e-09!14 | |ontology_enrichment_celltype=CL:0000153!1.46e-14!9;CL:0000447!1.46e-14!9;CL:0000667!1.04e-11!6;CL:0000058!1.04e-11!6;CL:0000138!1.04e-11!6;CL:0000499!6.55e-10!27;CL:0000135!3.09e-09!3;CL:0000386!3.09e-09!3;CL:0000388!3.09e-09!3;CL:0000327!6.81e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000153;8.01e-47;9!CL:0000447;8.01e-47;9!CL:0000138;2.20e-36;6!CL:0000499;9.00e-30;28!CL:0000327;7.41e-28;15!CL:0000135;3.72e-27;3!CL:0000388;3.72e-27;3!CL:0000235;1.39e-23;6!CL:0002540;7.98e-14;6!CL:0000214;1.19e-12;3!CL:0000151;1.30e-11;36!CL:0002092;1.68e-08;10 | |ontology_enrichment_celltype_v019=CL:0000153;8.01e-47;9!CL:0000447;8.01e-47;9!CL:0000138;2.20e-36;6!CL:0000499;9.00e-30;28!CL:0000327;7.41e-28;15!CL:0000135;3.72e-27;3!CL:0000388;3.72e-27;3!CL:0000235;1.39e-23;6!CL:0002540;7.98e-14;6!CL:0000214;1.19e-12;3!CL:0000151;1.30e-11;36!CL:0002092;1.68e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.58e-47,9;CL:0000447,8.58e-47,9;CL:0000058,2.20e-36,6;CL:0000138,2.20e-36,6;CL:0000499,9.43e-30,28;CL:0000327,7.72e-28,15;CL:0000135,3.89e-27,3;CL:0000388,3.89e-27,3;CL:0000235,1.48e-23,6;CL:0000151,1.91e-14,36;CL:0002540,8.33e-14,6;CL:0000214,1.26e-12,3;CL:0002092,1.72e-08,10;CL:0000134,1.59e-07,354;CL:0002320,2.61e-07,361 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.57e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;1.57e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;4.64e-10;1 | |ontology_enrichment_disease_v019=DOID:5662;4.64e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,4.06e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!3.09e-09!3 | |ontology_enrichment_uberon=UBERON:0000043!3.09e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.72e-27;3!UBERON:0000043;3.72e-27;3!UBERON:0007845;3.72e-27;3!UBERON:0006915;1.19e-12;3!UBERON:0007616;1.19e-12;3!UBERON:0002217;1.19e-12;3!UBERON:0002018;1.19e-12;3!UBERON:0001282;7.55e-10;1!UBERON:0009842;7.55e-10;1!UBERON:0003704;7.55e-10;1!UBERON:0001171;7.55e-10;1!UBERON:0001172;7.55e-10;1!UBERON:0002371;3.68e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0007846;3.72e-27;3!UBERON:0000043;3.72e-27;3!UBERON:0007845;3.72e-27;3!UBERON:0006915;1.19e-12;3!UBERON:0007616;1.19e-12;3!UBERON:0002217;1.19e-12;3!UBERON:0002018;1.19e-12;3!UBERON:0001282;7.55e-10;1!UBERON:0009842;7.55e-10;1!UBERON:0003704;7.55e-10;1!UBERON:0001171;7.55e-10;1!UBERON:0001172;7.55e-10;1!UBERON:0002371;3.68e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.89e-27,3;UBERON:0000043,3.89e-27,3;UBERON:0007845,3.89e-27,3;UBERON:0006915,1.26e-12,3;UBERON:0007616,1.26e-12,3;UBERON:0002217,1.26e-12,3;UBERON:0002018,1.26e-12,3;UBERON:0001282,6.91e-10,1;UBERON:0009842,6.91e-10,1;UBERON:0003704,6.91e-10,1;UBERON:0001171,6.91e-10,1;UBERON:0001172,6.91e-10,1;UBERON:0001434,4.33e-07,100;UBERON:0002384,5.11e-07,371 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,7.52006865953834,6.80778639115871,8.74814541756209,4.37971383272372,0,0,0,0,0,0,0,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,8.65815781015179,5.7966153292604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,3.64871341923571,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0,0,0,4.5481500811197,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770243085573222,0.15350367472613,0,0,0.580066775656914,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,14.7775344708365,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84344458585075,0.894704431569664,0.667396566847634,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.979762080328227,0,0,0,0,1.31897010310274,0,0.258565912723101,0.52893040697076,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.149254802886874,0,0,3.03044808440143,15.3456420069071,5.33886732957922,0,0.907385542579434,0,0,0,0,0,0,0,0,0.300515217994437,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877136198314828,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,4.6301762548103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,18.2277558901708,61.0071829793472,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@CHI3L1 | |short_description=p7@CHI3L1 | ||
}} | }} |
Latest revision as of 22:16, 19 September 2015
Short description: | p7@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -1bp_to_ENST00000404436_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.58e-47 | 9 |
carbohydrate secreting cell | 8.58e-47 | 9 |
chondroblast | 2.20e-36 | 6 |
chondrocyte | 2.20e-36 | 6 |
stromal cell | 9.43e-30 | 28 |
extracellular matrix secreting cell | 7.72e-28 | 15 |
fibrocyte | 3.89e-27 | 3 |
tendon cell | 3.89e-27 | 3 |
macrophage | 1.48e-23 | 6 |
secretory cell | 1.91e-14 | 36 |
mesenchymal stem cell of the bone marrow | 8.33e-14 | 6 |
synovial cell | 1.26e-12 | 3 |
bone marrow cell | 1.72e-08 | 10 |
mesenchymal cell | 1.59e-07 | 354 |
connective tissue cell | 2.61e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.89e-27 | 3 |
tendon | 3.89e-27 | 3 |
regular connective tissue | 3.89e-27 | 3 |
stratified squamous epithelium | 1.26e-12 | 3 |
layer of synovial tissue | 1.26e-12 | 3 |
synovial joint | 1.26e-12 | 3 |
synovial membrane of synovial joint | 1.26e-12 | 3 |
intralobular bile duct | 6.91e-10 | 1 |
acinus | 6.91e-10 | 1 |
intrahepatic bile duct | 6.91e-10 | 1 |
portal lobule | 6.91e-10 | 1 |
hepatic acinus | 6.91e-10 | 1 |
skeletal system | 4.33e-07 | 100 |
connective tissue | 5.11e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 4.06e-10 | 1 |