FFCP PHASE1:Hg19::chr12:69979210..69979252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10576 | |EntrezGene=10576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1615 | |HGNC=1615 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWF6,F8VQ14 | |UniProt=F5GWF6,F8VQ14 | ||
|association_with_transcript=0bp_to_ENST00000544368,ENST00000549933,ENST00000550010,ENST00000550455,ENST00000550638,ENST00000551620,ENST00000551899_5end | |association_with_transcript=0bp_to_ENST00000544368,ENST00000549933,ENST00000550010,ENST00000550455,ENST00000550638,ENST00000551620,ENST00000551899_5end | ||
|cluster_id=chr12:69979210..69979252,+ | |||
|coexpression_cluster_id=C153 | |coexpression_cluster_id=C153 | ||
|description=CAGE_peak_1_at_CCT2_5end | |description=CAGE_peak_1_at_CCT2_5end | ||
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|ontology_enrichment_celltype=CL:0000012!1.59e-22!682;CL:0000548!2.06e-21!679;CL:0000004!2.06e-21!679;CL:0000255!2.06e-21!679;CL:0000003!2.51e-14!722;CL:0000144!2.12e-10!625;CL:0000066!4.53e-09!254;CL:0000055!3.16e-08!180;CL:0000063!6.06e-08!578;CL:0002321!8.04e-08!248;CL:0000220!2.63e-07!246 | |ontology_enrichment_celltype=CL:0000012!1.59e-22!682;CL:0000548!2.06e-21!679;CL:0000004!2.06e-21!679;CL:0000255!2.06e-21!679;CL:0000003!2.51e-14!722;CL:0000144!2.12e-10!625;CL:0000066!4.53e-09!254;CL:0000055!3.16e-08!180;CL:0000063!6.06e-08!578;CL:0002321!8.04e-08!248;CL:0000220!2.63e-07!246 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.86e-09,253;CL:0002321,2.22e-07,250 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!5.57e-45!239;DOID:162!4.99e-44!235;DOID:0050686!1.72e-23!137;DOID:0050687!4.27e-21!143;DOID:305!1.48e-16!106;DOID:2531!6.18e-14!51;DOID:0060083!6.18e-14!51;DOID:1240!5.27e-11!39;DOID:8692!2.69e-08!31 | |ontology_enrichment_disease=DOID:14566!5.57e-45!239;DOID:162!4.99e-44!235;DOID:0050686!1.72e-23!137;DOID:0050687!4.27e-21!143;DOID:305!1.48e-16!106;DOID:2531!6.18e-14!51;DOID:0060083!6.18e-14!51;DOID:1240!5.27e-11!39;DOID:8692!2.69e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.99e-09;39!DOID:2531;1.08e-08;51!DOID:0060083;1.08e-08;51!DOID:8692;5.06e-08;31 | |ontology_enrichment_disease_v019=DOID:1240;2.99e-09;39!DOID:2531;1.08e-08;51!DOID:0060083;1.08e-08;51!DOID:8692;5.06e-08;31 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,5.57e-45,239;DOID:162,4.99e-44,235;DOID:0050686,1.72e-23,137;DOID:0050687,4.27e-21,143;DOID:305,1.48e-16,106;DOID:2531,6.18e-14,51;DOID:0060083,6.18e-14,51;DOID:1240,5.27e-11,39;DOID:8692,2.69e-08,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CCT2 | |short_description=p1@CCT2 | ||
}} | }} |
Latest revision as of 06:14, 20 September 2015
Short description: | p1@CCT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCT2_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 0bp_to_ENST00000544368, ENST00000549933, ENST00000550010, ENST00000550455, ENST00000550638, ENST00000551620, ENST00000551899_5end |
EntrezGene: | CCT2 |
HGNC: | 1615 |
UniProt: | F5GWF6F8VQ14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.86e-09 | 253 |
embryonic cell | 2.22e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.57e-45 | 239 |
cancer | 4.99e-44 | 235 |
organ system cancer | 1.72e-23 | 137 |
cell type cancer | 4.27e-21 | 143 |
carcinoma | 1.48e-16 | 106 |
hematologic cancer | 6.18e-14 | 51 |
immune system cancer | 6.18e-14 | 51 |
leukemia | 5.27e-11 | 39 |
myeloid leukemia | 2.69e-08 | 31 |