FFCP PHASE1:Hg19::chr4:16900198..16900214,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9079 | |EntrezGene=9079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6533 | |HGNC=6533 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000441778_5end | |association_with_transcript=2bp_to_ENST00000441778_5end | ||
|cluster_id=chr4:16900198..16900214,- | |||
|coexpression_cluster_id=C1083 | |coexpression_cluster_id=C1083 | ||
|description=CAGE_peak_2_at_LDB2_5end | |description=CAGE_peak_2_at_LDB2_5end | ||
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|ontology_enrichment_celltype=CL:0002139!1.96e-12!24;CL:0000115!3.88e-10!35;CL:0000071!7.74e-09!18;CL:0002546!7.74e-09!18;CL:0002078!1.39e-07!44 | |ontology_enrichment_celltype=CL:0002139!1.96e-12!24;CL:0000115!3.88e-10!35;CL:0000071!7.74e-09!18;CL:0002546!7.74e-09!18;CL:0002078!1.39e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.55e-13;24!CL:0000115;1.06e-09;36!CL:0000071;2.60e-09;18!CL:0002078;9.67e-07;45 | |ontology_enrichment_celltype_v019=CL:0002139;1.55e-13;24!CL:0000115;1.06e-09;36!CL:0000071;2.60e-09;18!CL:0002078;9.67e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.33e-13,24;CL:0000115,1.29e-11,36;CL:0000071,2.22e-09,18;CL:0002546,2.22e-09,18;CL:0002078,7.74e-09,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.60e-09;18!UBERON:0006601;4.39e-07;82 | |ontology_enrichment_development_v019=CL:0002546;2.60e-09;18!UBERON:0006601;4.39e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.96e-22;32!UBERON:0002791;1.20e-20;32!UBERON:0001893;1.32e-20;34!UBERON:0002619;1.47e-20;22!UBERON:0000956;9.17e-20;25!UBERON:0000203;9.17e-20;25!UBERON:0001950;1.66e-19;20!UBERON:0003528;2.24e-19;34!UBERON:0002020;2.24e-19;34!UBERON:0002780;1.43e-18;41!UBERON:0001890;1.43e-18;41!UBERON:0000073;1.13e-11;53!UBERON:0002616;1.13e-11;53!UBERON:0001017;1.45e-09;75!UBERON:0000955;2.11e-09;68!UBERON:0004638;2.60e-09;18!UBERON:0001986;2.60e-09;18!UBERON:0004852;2.60e-09;18!UBERON:0007023;1.04e-08;114!UBERON:0000922;5.98e-08;49!UBERON:0006914;6.46e-08;25!UBERON:0001016;6.87e-08;83!UBERON:0000487;8.51e-08;22!UBERON:0001871;3.59e-07;6!UBERON:0000200;8.59e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001869;2.96e-22;32!UBERON:0002791;1.20e-20;32!UBERON:0001893;1.32e-20;34!UBERON:0002619;1.47e-20;22!UBERON:0000956;9.17e-20;25!UBERON:0000203;9.17e-20;25!UBERON:0001950;1.66e-19;20!UBERON:0003528;2.24e-19;34!UBERON:0002020;2.24e-19;34!UBERON:0002780;1.43e-18;41!UBERON:0001890;1.43e-18;41!UBERON:0000073;1.13e-11;53!UBERON:0002616;1.13e-11;53!UBERON:0001017;1.45e-09;75!UBERON:0000955;2.11e-09;68!UBERON:0004638;2.60e-09;18!UBERON:0001986;2.60e-09;18!UBERON:0004852;2.60e-09;18!UBERON:0007023;1.04e-08;114!UBERON:0000922;5.98e-08;49!UBERON:0006914;6.46e-08;25!UBERON:0001016;6.87e-08;83!UBERON:0000487;8.51e-08;22!UBERON:0001871;3.59e-07;6!UBERON:0000200;8.59e-07;6 | ||
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| ||
|short_description=p2@LDB2 | |short_description=p2@LDB2 | ||
}} | }} |
Latest revision as of 15:36, 16 September 2015
Short description: | p2@LDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LDB2_5end |
Coexpression cluster: | C1083_lung_uterus_Endothelial_neuroectodermal_spleen_mesenchymal_occipital |
Association with transcript: | 2bp_to_ENST00000441778_5end |
EntrezGene: | LDB2 |
HGNC: | 6533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.33e-13 | 24 |
endothelial cell | 1.29e-11 | 36 |
blood vessel endothelial cell | 2.22e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.22e-09 | 18 |
meso-epithelial cell | 7.74e-09 | 45 |