FFCP PHASE1:Hg19::chr21:39875736..39875750,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:39875736..39875750,+ | |||
|coexpression_cluster_id=C328 | |coexpression_cluster_id=C328 | ||
|description=CAGE_peak_at_chr21:39875736..39875750,+ | |description=CAGE_peak_at_chr21:39875736..39875750,+ | ||
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|ontology_enrichment_celltype=CL:0002139!1.00e-28!24;CL:0000115!1.31e-24!35;CL:0000071!9.37e-21!18;CL:0002546!9.37e-21!18;CL:0002078!1.71e-17!44;CL:0000213!2.32e-11!57;CL:0000215!2.32e-11!57;CL:1000413!9.79e-10!9;CL:0005020!1.40e-09!6;CL:0002138!1.40e-09!6;CL:0005022!1.40e-09!6;CL:0000222!3.37e-09!119;CL:0002543!3.62e-09!6 | |ontology_enrichment_celltype=CL:0002139!1.00e-28!24;CL:0000115!1.31e-24!35;CL:0000071!9.37e-21!18;CL:0002546!9.37e-21!18;CL:0002078!1.71e-17!44;CL:0000213!2.32e-11!57;CL:0000215!2.32e-11!57;CL:1000413!9.79e-10!9;CL:0005020!1.40e-09!6;CL:0002138!1.40e-09!6;CL:0005022!1.40e-09!6;CL:0000222!3.37e-09!119;CL:0002543!3.62e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.35e-47;24!CL:0000115;9.19e-38;36!CL:0000071;1.42e-30;18!CL:0002078;2.22e-21;45!CL:0002138;4.46e-19;6!CL:1000413;2.12e-15;9!CL:0000213;3.75e-14;58!CL:0000215;3.75e-14;58!CL:0002543;2.63e-13;6!CL:0002618;2.71e-10;3!CL:0002544;1.26e-08;6!CL:0002545;2.41e-07;2 | |ontology_enrichment_celltype_v019=CL:0002139;2.35e-47;24!CL:0000115;9.19e-38;36!CL:0000071;1.42e-30;18!CL:0002078;2.22e-21;45!CL:0002138;4.46e-19;6!CL:1000413;2.12e-15;9!CL:0000213;3.75e-14;58!CL:0000215;3.75e-14;58!CL:0002543;2.63e-13;6!CL:0002618;2.71e-10;3!CL:0002544;1.26e-08;6!CL:0002545;2.41e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-47,24;CL:0000115,7.13e-44,36;CL:0002078,1.08e-33,45;CL:0000071,6.13e-31,18;CL:0002546,6.13e-31,18;CL:0000213,1.35e-24,58;CL:0000215,1.35e-24,58;CL:0005020,4.98e-19,6;CL:0002138,4.98e-19,6;CL:0005022,4.98e-19,6;CL:0000222,4.51e-16,121;CL:1000413,9.47e-16,9;CL:0002543,2.57e-13,6;CL:0002618,2.54e-10,3;CL:0002544,1.34e-08,6;CL:0000076,1.96e-08,63;CL:0002545,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.42e-30;18!CL:0005022;4.46e-19;6 | |ontology_enrichment_development_v019=CL:0002546;1.42e-30;18!CL:0005022;4.46e-19;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.50e-33!286;UBERON:0007023!2.95e-29!115;UBERON:0004111!8.20e-29!241;UBERON:0000025!8.80e-28!194;UBERON:0000055!3.63e-27!69;UBERON:0002049!1.15e-26!79;UBERON:0007798!1.15e-26!79;UBERON:0001009!6.15e-23!113;UBERON:0001981!1.44e-22!60;UBERON:0007500!1.44e-22!60;UBERON:0004537!1.44e-22!60;UBERON:0006965!1.44e-22!60;UBERON:0004535!4.85e-21!110;UBERON:0001986!9.37e-21!18;UBERON:0004638!9.37e-21!18;UBERON:0004852!9.37e-21!18;UBERON:0004872!2.11e-20!84;UBERON:0000483!5.25e-17!309;UBERON:0000119!1.47e-16!312;UBERON:0000487!7.59e-16!22;UBERON:0001049!8.27e-16!57;UBERON:0005068!8.27e-16!57;UBERON:0006241!8.27e-16!57;UBERON:0007135!8.27e-16!57;UBERON:0002616!6.18e-15!59;UBERON:0003914!2.27e-14!118;UBERON:0001637!2.01e-13!42;UBERON:0003509!2.01e-13!42;UBERON:0004572!2.01e-13!42;UBERON:0006914!3.18e-13!25;UBERON:0003075!6.54e-13!86;UBERON:0007284!6.54e-13!86;UBERON:0000955!1.17e-12!69;UBERON:0006238!1.17e-12!69;UBERON:0001017!3.16e-12!82;UBERON:0005743!7.91e-12!86;UBERON:0002346!8.27e-12!90;UBERON:0002780!3.03e-11!41;UBERON:0001890!3.03e-11!41;UBERON:0006240!3.03e-11!41;UBERON:0001737!6.27e-11!9;UBERON:0003080!8.20e-11!42;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0001893!7.92e-10!34;UBERON:0003915!9.79e-10!9;UBERON:0004700!9.79e-10!9;UBERON:0001917!9.79e-10!9;UBERON:0000073!1.14e-09!94;UBERON:0001016!1.14e-09!94;UBERON:0002791!2.36e-09!33;UBERON:0000468!2.72e-09!659;UBERON:0000467!3.27e-09!625;UBERON:0000480!3.91e-09!626;UBERON:0001869!1.00e-08!32;UBERON:0001557!3.51e-08!19;UBERON:0004573!4.81e-08!33;UBERON:0004571!4.81e-08!33;UBERON:0002308!5.52e-08!9;UBERON:0000125!5.52e-08!9;UBERON:0000153!5.60e-08!129;UBERON:0007811!5.60e-08!129;UBERON:0000064!5.66e-08!219;UBERON:0003056!5.74e-08!61;UBERON:0000033!2.27e-07!123;UBERON:0002298!3.62e-07!8;UBERON:0001638!4.16e-07!9;UBERON:0003920!4.16e-07!9;UBERON:0004582!4.16e-07!9;UBERON:0001473!7.92e-07!8;UBERON:0004536!7.92e-07!8;UBERON:0006558!7.92e-07!8 | |ontology_enrichment_uberon=UBERON:0000477!2.50e-33!286;UBERON:0007023!2.95e-29!115;UBERON:0004111!8.20e-29!241;UBERON:0000025!8.80e-28!194;UBERON:0000055!3.63e-27!69;UBERON:0002049!1.15e-26!79;UBERON:0007798!1.15e-26!79;UBERON:0001009!6.15e-23!113;UBERON:0001981!1.44e-22!60;UBERON:0007500!1.44e-22!60;UBERON:0004537!1.44e-22!60;UBERON:0006965!1.44e-22!60;UBERON:0004535!4.85e-21!110;UBERON:0001986!9.37e-21!18;UBERON:0004638!9.37e-21!18;UBERON:0004852!9.37e-21!18;UBERON:0004872!2.11e-20!84;UBERON:0000483!5.25e-17!309;UBERON:0000119!1.47e-16!312;UBERON:0000487!7.59e-16!22;UBERON:0001049!8.27e-16!57;UBERON:0005068!8.27e-16!57;UBERON:0006241!8.27e-16!57;UBERON:0007135!8.27e-16!57;UBERON:0002616!6.18e-15!59;UBERON:0003914!2.27e-14!118;UBERON:0001637!2.01e-13!42;UBERON:0003509!2.01e-13!42;UBERON:0004572!2.01e-13!42;UBERON:0006914!3.18e-13!25;UBERON:0003075!6.54e-13!86;UBERON:0007284!6.54e-13!86;UBERON:0000955!1.17e-12!69;UBERON:0006238!1.17e-12!69;UBERON:0001017!3.16e-12!82;UBERON:0005743!7.91e-12!86;UBERON:0002346!8.27e-12!90;UBERON:0002780!3.03e-11!41;UBERON:0001890!3.03e-11!41;UBERON:0006240!3.03e-11!41;UBERON:0001737!6.27e-11!9;UBERON:0003080!8.20e-11!42;UBERON:0002020!1.47e-10!34;UBERON:0003528!1.47e-10!34;UBERON:0001893!7.92e-10!34;UBERON:0003915!9.79e-10!9;UBERON:0004700!9.79e-10!9;UBERON:0001917!9.79e-10!9;UBERON:0000073!1.14e-09!94;UBERON:0001016!1.14e-09!94;UBERON:0002791!2.36e-09!33;UBERON:0000468!2.72e-09!659;UBERON:0000467!3.27e-09!625;UBERON:0000480!3.91e-09!626;UBERON:0001869!1.00e-08!32;UBERON:0001557!3.51e-08!19;UBERON:0004573!4.81e-08!33;UBERON:0004571!4.81e-08!33;UBERON:0002308!5.52e-08!9;UBERON:0000125!5.52e-08!9;UBERON:0000153!5.60e-08!129;UBERON:0007811!5.60e-08!129;UBERON:0000064!5.66e-08!219;UBERON:0003056!5.74e-08!61;UBERON:0000033!2.27e-07!123;UBERON:0002298!3.62e-07!8;UBERON:0001638!4.16e-07!9;UBERON:0003920!4.16e-07!9;UBERON:0004582!4.16e-07!9;UBERON:0001473!7.92e-07!8;UBERON:0004536!7.92e-07!8;UBERON:0006558!7.92e-07!8 | ||
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|short_description=p@chr21:39875736..39875750,+ | |short_description=p@chr21:39875736..39875750,+ | ||
}} | }} |
Latest revision as of 17:53, 28 July 2015
Short description: | p@chr21:39875736..39875750, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39875736..39875750, + |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-47 | 24 |
endothelial cell | 7.13e-44 | 36 |
meso-epithelial cell | 1.08e-33 | 45 |
blood vessel endothelial cell | 6.13e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.13e-31 | 18 |
lining cell | 1.35e-24 | 58 |
barrier cell | 1.35e-24 | 58 |
lymphangioblast | 4.98e-19 | 6 |
endothelial cell of lymphatic vessel | 4.98e-19 | 6 |
vascular lymphangioblast | 4.98e-19 | 6 |
mesodermal cell | 4.51e-16 | 121 |
endothelial cell of artery | 9.47e-16 | 9 |
vein endothelial cell | 2.57e-13 | 6 |
endothelial cell of umbilical vein | 2.54e-10 | 3 |
aortic endothelial cell | 1.34e-08 | 6 |
squamous epithelial cell | 1.96e-08 | 63 |
thoracic aorta endothelial cell | 2.25e-07 | 2 |